Wall clock time and date at job start Tue Mar 9 2021 13:41:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53005 * 109.46760 * 2 1 4 4 C 1.52996 * 109.47018 * 240.00316 * 2 1 3 5 5 C 1.52999 * 109.47267 * 119.99682 * 2 1 3 6 6 H 1.08992 * 112.90620 * 186.27982 * 5 2 1 7 7 C 1.53783 * 113.61650 * 317.53846 * 5 2 1 8 8 C 1.53775 * 87.08266 * 139.97870 * 7 5 2 9 9 H 1.09003 * 113.61211 * 220.01885 * 8 7 5 10 10 N 1.46497 * 113.61660 * 89.11168 * 8 7 5 11 11 C 1.34778 * 119.99721 * 107.49966 * 10 8 7 12 12 O 1.21592 * 120.00328 * 0.02562 * 11 10 8 13 13 C 1.47578 * 119.99896 * 180.02562 * 11 10 8 14 14 C 1.40203 * 119.83230 * 0.02562 * 13 11 10 15 15 C 1.36231 * 120.37807 * 179.97438 * 14 13 11 16 16 C 1.39878 * 119.95961 * 0.02562 * 15 14 13 17 17 C 1.46261 * 133.83875 * 179.97438 * 16 15 14 18 18 C 1.50698 * 126.48262 * 0.04970 * 17 16 15 19 19 O 1.42904 * 109.46996 * 75.00502 * 18 17 16 20 20 Si 1.86301 * 109.46957 * 195.00345 * 18 17 16 21 21 C 1.34457 * 107.03200 * 180.02562 * 17 16 15 22 22 N 1.36560 * 109.98626 * 359.97438 * 21 17 16 23 23 C 1.37832 * 109.86321 * 0.02562 * 22 21 17 24 24 C 1.38644 * 133.38205 * 180.28249 * 23 22 21 25 25 C 1.53784 * 113.60903 * 55.03178 * 5 2 1 26 26 H 1.08996 * 109.47552 * 306.29766 * 1 2 3 27 27 H 1.09003 * 109.47880 * 66.30571 * 1 2 3 28 28 H 1.09006 * 109.46876 * 186.30244 * 1 2 3 29 29 H 1.09000 * 109.46700 * 180.02562 * 3 2 1 30 30 H 1.08995 * 109.46985 * 300.00300 * 3 2 1 31 31 H 1.09000 * 109.47015 * 60.00218 * 3 2 1 32 32 H 1.08996 * 109.47207 * 299.99769 * 4 2 1 33 33 H 1.09002 * 109.47526 * 59.99972 * 4 2 1 34 34 H 1.09000 * 109.47193 * 179.97438 * 4 2 1 35 35 H 1.09004 * 113.60826 * 254.52780 * 7 5 2 36 36 H 1.08996 * 113.61498 * 25.42564 * 7 5 2 37 37 H 0.97001 * 120.00493 * 287.50293 * 10 8 7 38 38 H 1.07994 * 119.81011 * 0.02562 * 14 13 11 39 39 H 1.07997 * 120.02121 * 180.02562 * 15 14 13 40 40 H 1.09003 * 109.47317 * 315.00383 * 18 17 16 41 41 H 0.96704 * 113.99752 * 59.99694 * 19 18 17 42 42 H 1.48497 * 110.00182 * 58.68353 * 20 18 17 43 43 H 1.48504 * 109.99987 * 180.02562 * 20 18 17 44 44 H 1.07997 * 125.00180 * 179.97438 * 21 17 16 45 45 H 0.97006 * 125.07292 * 180.02562 * 22 21 17 46 46 H 1.08000 * 120.16641 * 359.93835 * 24 23 22 47 47 H 1.08999 * 113.61855 * 334.56583 * 25 5 2 48 48 H 1.09002 * 113.61158 * 105.46982 * 25 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0399 -0.7212 -1.2493 5 6 2.0400 -0.7212 1.2493 6 1 3.1223 -0.6597 1.3624 7 6 1.2654 -0.3610 2.5280 8 6 1.3631 -1.8469 2.9116 9 1 0.4533 -2.2419 3.3637 10 7 2.5691 -2.1779 3.6746 11 6 2.4789 -2.4564 4.9902 12 8 1.3966 -2.4333 5.5438 13 6 3.6939 -2.7893 5.7589 14 6 4.9402 -2.8144 5.1172 15 6 6.0690 -3.1198 5.8162 16 6 5.9875 -3.4110 7.1819 17 6 6.9728 -3.7687 8.2020 18 6 8.4581 -3.9217 7.9984 19 8 9.0577 -2.6303 7.8764 20 14 9.1963 -4.8137 9.4580 21 6 6.3026 -3.9347 9.3557 22 7 4.9700 -3.7121 9.1577 23 6 4.7403 -3.3891 7.8376 24 6 3.5973 -3.0717 7.1198 25 6 1.4839 -2.1461 1.4080 26 1 -0.3634 0.6083 0.8282 27 1 -0.3635 0.4130 -0.9410 28 1 -0.3633 -1.0215 0.1128 29 1 3.1299 1.4426 -0.0005 30 1 1.6765 1.9564 -0.8899 31 1 1.6766 1.9564 0.8900 32 1 1.6766 -1.7488 -1.2493 33 1 1.6766 -0.2073 -2.1393 34 1 3.1299 -0.7208 -1.2495 35 1 1.8138 0.3002 3.1990 36 1 0.2457 -0.0245 2.3406 37 1 3.4326 -2.1967 3.2329 38 1 5.0059 -2.5895 4.0630 39 1 7.0261 -3.1370 5.3162 40 1 8.6432 -4.4955 7.0903 41 1 8.9325 -2.0639 8.6501 42 1 8.5586 -6.1456 9.6149 43 1 10.6610 -4.9704 9.2698 44 1 6.7522 -4.2045 10.3000 45 1 4.2868 -3.7722 9.8437 46 1 2.6364 -3.0475 7.6122 47 1 0.5240 -2.2978 0.9145 48 1 2.2088 -2.9261 1.1749 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_12335838.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:41:12 Heat of formation + Delta-G solvation = 9.024475 kcal Electronic energy + Delta-G solvation = -27699.118411 eV Core-core repulsion = 23914.363881 eV Total energy + Delta-G solvation = -3784.754530 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.178 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.48029 -41.54941 -40.03343 -37.87941 -37.44793 -36.49115 -33.69035 -33.23819 -30.71033 -30.49161 -28.51029 -28.26171 -26.60808 -26.28296 -26.13096 -24.42799 -23.61227 -21.57870 -21.14033 -20.80753 -19.43878 -19.06174 -18.33759 -17.61255 -17.05323 -16.96467 -16.41804 -16.22635 -16.03752 -15.83542 -15.55887 -15.33421 -15.22734 -15.00688 -14.81338 -14.71353 -14.41565 -14.20195 -14.01132 -13.85572 -13.50053 -13.22528 -13.10901 -12.83132 -12.73670 -12.55958 -12.45456 -12.30837 -12.23448 -12.05229 -11.91549 -11.88587 -11.37306 -11.12961 -10.88008 -10.85748 -10.74396 -10.35462 -9.98137 -9.34366 -8.80563 -5.10460 -0.24757 0.40674 1.28487 1.37613 1.61924 1.88738 1.96830 2.03633 2.24898 2.94921 3.50575 3.53601 3.54850 3.59557 3.71054 3.75141 3.76909 3.86900 3.88603 4.03254 4.11220 4.23962 4.24978 4.32546 4.43095 4.49799 4.51950 4.56475 4.67510 4.72515 4.74114 4.75093 4.77216 4.87572 4.91810 4.97001 4.99239 5.00800 5.09819 5.11661 5.16312 5.21886 5.26995 5.35605 5.44101 5.44629 5.44985 5.50685 5.61571 5.70631 5.99497 6.36706 6.54614 6.64961 7.28592 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.059 4.059 3 C -0.141 4.141 4 C -0.141 4.141 5 C -0.099 4.099 6 H 0.087 0.913 7 C -0.151 4.151 8 C 0.119 3.881 9 H 0.103 0.897 10 N -0.708 5.708 11 C 0.566 3.434 12 O -0.537 6.537 13 C -0.121 4.121 14 C -0.113 4.113 15 C -0.073 4.073 16 C -0.064 4.064 17 C -0.211 4.211 18 C -0.030 4.030 19 O -0.542 6.542 20 Si 0.685 3.315 21 C 0.077 3.923 22 N -0.584 5.584 23 C 0.081 3.919 24 C -0.056 4.056 25 C -0.144 4.144 26 H 0.059 0.941 27 H 0.054 0.946 28 H 0.059 0.941 29 H 0.053 0.947 30 H 0.054 0.946 31 H 0.055 0.945 32 H 0.055 0.945 33 H 0.054 0.946 34 H 0.053 0.947 35 H 0.069 0.931 36 H 0.097 0.903 37 H 0.401 0.599 38 H 0.125 0.875 39 H 0.130 0.870 40 H 0.111 0.889 41 H 0.377 0.623 42 H -0.256 1.256 43 H -0.254 1.254 44 H 0.179 0.821 45 H 0.422 0.578 46 H 0.136 0.864 47 H 0.099 0.901 48 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.698 0.491 1.667 2.429 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.059 4.059 3 C -0.198 4.198 4 C -0.198 4.198 5 C -0.117 4.117 6 H 0.106 0.894 7 C -0.189 4.189 8 C 0.014 3.986 9 H 0.121 0.879 10 N -0.359 5.359 11 C 0.354 3.646 12 O -0.415 6.415 13 C -0.125 4.125 14 C -0.133 4.133 15 C -0.091 4.091 16 C -0.069 4.069 17 C -0.219 4.219 18 C -0.141 4.141 19 O -0.347 6.347 20 Si 0.586 3.414 21 C -0.052 4.052 22 N -0.186 5.186 23 C -0.025 4.025 24 C -0.077 4.077 25 C -0.182 4.182 26 H 0.078 0.922 27 H 0.074 0.926 28 H 0.078 0.922 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.074 0.926 32 H 0.074 0.926 33 H 0.073 0.927 34 H 0.072 0.928 35 H 0.088 0.912 36 H 0.115 0.885 37 H 0.237 0.763 38 H 0.143 0.857 39 H 0.148 0.852 40 H 0.128 0.872 41 H 0.224 0.776 42 H -0.181 1.181 43 H -0.179 1.179 44 H 0.196 0.804 45 H 0.260 0.740 46 H 0.154 0.846 47 H 0.118 0.882 48 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 1.445 -0.461 1.860 2.400 hybrid contribution -0.119 -0.057 -0.487 0.504 sum 1.326 -0.517 1.373 1.977 Atomic orbital electron populations 1.22041 0.94617 1.02022 1.01850 1.20426 0.95589 0.95363 0.94543 1.21846 1.00893 0.95315 1.01794 1.21847 1.00934 1.00287 0.96777 1.22644 0.99496 0.95262 0.94325 0.89437 1.23596 1.01917 0.96503 0.96916 1.21839 0.88886 0.96268 0.91634 0.87932 1.45562 1.10505 1.70849 1.09005 1.18151 0.88542 0.76203 0.81722 1.90791 1.28992 1.52108 1.69609 1.19422 0.93155 1.06427 0.93541 1.20678 0.91399 1.01603 0.99630 1.20198 0.98632 0.98358 0.91938 1.19176 0.91637 1.02364 0.93683 1.20732 0.95607 1.12998 0.92554 1.24334 0.89394 0.90798 1.09604 1.86508 1.77079 1.25781 1.45329 0.95268 0.80447 0.81732 0.83923 1.21745 0.82756 1.01430 0.99233 1.41720 1.08156 1.60274 1.08467 1.18074 0.95273 1.04493 0.84650 1.20075 0.96514 0.98607 0.92530 1.23469 1.02769 0.97272 0.94713 0.92220 0.92645 0.92240 0.92758 0.92686 0.92594 0.92556 0.92693 0.92751 0.91196 0.88451 0.76321 0.85724 0.85232 0.87154 0.77580 1.18089 1.17896 0.80440 0.73996 0.84603 0.88230 0.90954 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.16 7.53 37.16 0.28 0.44 16 2 C -0.06 0.07 0.68 -154.51 -0.10 -0.04 16 3 C -0.14 0.10 8.42 37.16 0.31 0.41 16 4 C -0.14 0.15 8.33 37.16 0.31 0.46 16 5 C -0.10 0.13 2.91 -89.81 -0.26 -0.13 16 6 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 7 C -0.15 0.03 7.04 -25.92 -0.18 -0.15 16 8 C 0.12 0.06 4.32 -67.12 -0.29 -0.23 16 9 H 0.10 0.23 7.47 -51.93 -0.39 -0.16 16 10 N -0.71 -0.43 5.21 -54.04 -0.28 -0.71 16 11 C 0.57 1.93 7.76 -12.45 -0.10 1.84 16 12 O -0.54 -3.73 15.91 5.28 0.08 -3.64 16 13 C -0.12 -0.28 5.87 -104.95 -0.62 -0.90 16 14 C -0.11 -0.07 9.46 -39.57 -0.37 -0.45 16 15 C -0.07 -0.09 10.03 -39.69 -0.40 -0.49 16 16 C -0.06 -0.12 6.35 -105.04 -0.67 -0.79 16 17 C -0.21 -0.01 5.57 -102.74 -0.57 -0.58 16 18 C -0.03 0.01 3.06 36.00 0.11 0.12 16 19 O -0.54 -0.07 12.88 -35.23 -0.45 -0.52 16 20 Si 0.68 -1.35 30.75 -169.99 -5.23 -6.58 16 21 C 0.08 -0.16 10.43 -16.78 -0.18 -0.33 16 22 N -0.58 0.78 6.07 -10.68 -0.06 0.71 16 23 C 0.08 0.12 7.26 -84.00 -0.61 -0.49 16 24 C -0.06 -0.13 9.61 -39.03 -0.37 -0.50 16 25 C -0.14 0.19 6.46 -25.91 -0.17 0.02 16 26 H 0.06 -0.06 6.43 -51.93 -0.33 -0.39 16 27 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 28 H 0.06 -0.08 6.00 -51.93 -0.31 -0.39 16 29 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.05 -0.02 8.05 -51.93 -0.42 -0.44 16 32 H 0.06 -0.06 7.61 -51.93 -0.39 -0.46 16 33 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 34 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 35 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 36 H 0.10 -0.04 5.72 -51.93 -0.30 -0.34 16 37 H 0.40 -0.67 6.69 -40.82 -0.27 -0.94 16 38 H 0.12 -0.25 6.36 -52.49 -0.33 -0.58 16 39 H 0.13 0.03 8.06 -52.49 -0.42 -0.40 16 40 H 0.11 0.03 7.96 -51.93 -0.41 -0.38 16 41 H 0.38 -1.41 8.70 45.56 0.40 -1.02 16 42 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 43 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 44 H 0.18 -1.02 6.35 -52.49 -0.33 -1.36 16 45 H 0.42 -1.72 8.96 -40.82 -0.37 -2.08 16 46 H 0.14 0.29 7.62 -52.49 -0.40 -0.11 16 47 H 0.10 -0.15 6.02 -51.93 -0.31 -0.47 16 48 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 LS Contribution 379.25 15.07 5.72 5.72 Total: 0.00 -8.58 379.25 -11.29 -19.87 By element: Atomic # 1 Polarization: -5.86 SS G_CDS: -7.18 Total: -13.04 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: -3.88 Total: -1.79 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.35 Total: 0.00 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -0.37 Total: -4.17 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: -5.23 Total: -6.58 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -8.58 -11.29 -19.87 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_12335838.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.890 kcal (2) G-P(sol) polarization free energy of solvation -8.577 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.312 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.288 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.865 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.024 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds