Wall clock time and date at job start Tue Mar 9 2021 13:41:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53003 * 109.47197 * 2 1 4 4 C 1.52995 * 109.47490 * 239.99785 * 2 1 3 5 5 C 1.53007 * 109.46922 * 119.99650 * 2 1 3 6 6 H 1.08995 * 112.85140 * 292.51994 * 5 2 1 7 7 C 1.53787 * 113.60935 * 63.71227 * 5 2 1 8 8 C 1.53783 * 87.07796 * 140.06552 * 7 5 2 9 9 H 1.08999 * 113.61573 * 220.01791 * 8 7 5 10 10 N 1.46499 * 113.61584 * 89.19804 * 8 7 5 11 11 C 1.34774 * 119.99984 * 154.99673 * 10 8 7 12 12 O 1.21552 * 120.00268 * 0.02562 * 11 10 8 13 13 C 1.47847 * 120.00013 * 179.97438 * 11 10 8 14 14 C 1.39546 * 120.13943 * 0.02562 * 13 11 10 15 15 C 1.38076 * 119.84413 * 180.02562 * 14 13 11 16 16 Br 1.89097 * 119.93948 * 179.97438 * 15 14 13 17 17 C 1.38431 * 120.11903 * 0.02562 * 15 14 13 18 18 C 1.38362 * 120.28638 * 359.97438 * 17 15 14 19 19 C 1.50693 * 119.92114 * 180.02562 * 18 17 15 20 20 O 1.42906 * 109.47249 * 245.00099 * 19 18 17 21 21 Si 1.86296 * 109.47304 * 4.99888 * 19 18 17 22 22 C 1.37944 * 120.15524 * 359.72103 * 18 17 15 23 23 C 1.53783 * 113.61241 * 161.31619 * 5 2 1 24 24 H 1.08999 * 109.46978 * 300.00593 * 1 2 3 25 25 H 1.09000 * 109.46372 * 60.00180 * 1 2 3 26 26 H 1.08997 * 109.47105 * 179.97438 * 1 2 3 27 27 H 1.08998 * 109.47113 * 179.97438 * 3 2 1 28 28 H 1.08998 * 109.46930 * 299.99611 * 3 2 1 29 29 H 1.09001 * 109.46957 * 60.00105 * 3 2 1 30 30 H 1.09007 * 109.46868 * 293.50790 * 4 2 1 31 31 H 1.09003 * 109.47199 * 53.50118 * 4 2 1 32 32 H 1.08997 * 109.47509 * 173.50756 * 4 2 1 33 33 H 1.08999 * 113.60983 * 254.61240 * 7 5 2 34 34 H 1.08999 * 113.61823 * 25.51846 * 7 5 2 35 35 H 0.96996 * 119.99916 * 335.00135 * 10 8 7 36 36 H 1.08002 * 120.07759 * 0.02562 * 14 13 11 37 37 H 1.08000 * 119.85378 * 180.02562 * 17 15 14 38 38 H 1.09006 * 109.47305 * 125.00006 * 19 18 17 39 39 H 0.96693 * 113.99784 * 59.99783 * 20 19 18 40 40 H 1.48505 * 110.00100 * 179.97438 * 21 19 18 41 41 H 1.48496 * 110.00340 * 301.32015 * 21 19 18 42 42 H 1.07994 * 120.06630 * 180.27678 * 22 18 17 43 43 H 1.08998 * 113.61516 * 334.48972 * 23 5 2 44 44 H 1.09005 * 113.60984 * 105.39229 * 23 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2491 5 6 2.0400 -0.7212 1.2494 6 1 1.8184 -0.1813 2.1699 7 6 1.6569 -2.2097 1.3008 8 6 3.0664 -2.4723 1.8569 9 1 3.5330 -3.3724 1.4568 10 7 3.1453 -2.3918 3.3176 11 6 4.1125 -3.0589 3.9779 12 8 4.9196 -3.7269 3.3615 13 6 4.1926 -2.9773 5.4520 14 6 3.2679 -2.2109 6.1625 15 6 3.3486 -2.1385 7.5390 16 35 2.0974 -1.1002 8.5045 17 6 4.3445 -2.8238 8.2134 18 6 5.2640 -3.5853 7.5141 19 6 6.3444 -4.3284 8.2566 20 8 7.6208 -3.7914 7.9037 21 14 6.0780 -4.1422 10.0910 22 6 5.1903 -3.6708 6.1392 23 6 3.5038 -1.1801 1.1413 24 1 -0.3633 0.5139 0.8899 25 1 -0.3632 0.5138 -0.8900 26 1 -0.3633 -1.0276 -0.0005 27 1 3.1301 1.4425 0.0005 28 1 1.6768 1.9563 -0.8900 29 1 1.6767 1.9563 0.8900 30 1 1.7748 -1.7770 -1.1929 31 1 1.5850 -0.2790 -2.1354 32 1 3.1239 -0.6217 -1.3091 33 1 0.8594 -2.4310 2.0101 34 1 1.4858 -2.6508 0.3188 35 1 2.5015 -1.8586 3.8094 36 1 2.4909 -1.6756 5.6370 37 1 4.4034 -2.7646 9.2902 38 1 6.3082 -5.3847 7.9896 39 1 7.7242 -2.8531 8.1132 40 1 7.1367 -4.8712 10.8346 41 1 6.0934 -2.7047 10.4631 42 1 5.9061 -4.2691 5.5952 43 1 3.8367 -1.3401 0.1158 44 1 4.1963 -0.5707 1.7221 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_12335870.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:41:32 Heat of formation + Delta-G solvation = -20.008908 kcal Electronic energy + Delta-G solvation = -25101.090829 eV Core-core repulsion = 21452.675125 eV Total energy + Delta-G solvation = -3648.415704 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.077 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.87719 -40.98960 -39.60753 -37.83170 -36.59547 -34.19436 -33.67432 -32.60683 -30.52586 -28.57086 -28.30927 -27.14908 -26.55034 -26.32810 -24.84570 -22.87969 -21.71091 -21.24860 -19.23828 -19.16530 -17.97483 -17.70727 -17.27823 -16.70869 -16.50153 -16.40555 -15.96945 -15.80910 -15.68541 -15.19684 -15.06442 -14.94521 -14.38213 -14.28029 -14.19927 -13.90701 -13.56797 -13.34330 -13.24392 -13.05150 -12.85098 -12.79327 -12.51095 -12.31438 -12.11487 -12.00936 -11.95119 -11.83489 -11.52241 -11.42728 -11.20369 -11.09812 -10.95132 -10.73008 -10.38626 -10.09124 -9.95942 -5.08246 -0.54357 -0.21944 0.36127 1.11563 1.46593 1.55266 1.84305 1.94720 2.46175 3.15737 3.26100 3.34557 3.45268 3.46028 3.64785 3.71908 3.77725 3.81273 3.91879 3.97235 4.15546 4.17289 4.19167 4.22326 4.45439 4.46661 4.62131 4.66324 4.68270 4.69586 4.72072 4.77183 4.86247 4.88727 4.90661 4.94302 5.02719 5.03510 5.05054 5.11236 5.15967 5.30553 5.33112 5.39200 5.40085 5.59721 6.27143 6.34196 7.07534 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.059 4.059 3 C -0.141 4.141 4 C -0.148 4.148 5 C -0.099 4.099 6 H 0.087 0.913 7 C -0.143 4.143 8 C 0.118 3.882 9 H 0.105 0.895 10 N -0.707 5.707 11 C 0.564 3.436 12 O -0.525 6.525 13 C -0.127 4.127 14 C -0.053 4.053 15 C -0.094 4.094 16 Br -0.033 7.033 17 C -0.065 4.065 18 C -0.117 4.117 19 C -0.074 4.074 20 O -0.524 6.524 21 Si 0.682 3.318 22 C -0.017 4.017 23 C -0.151 4.151 24 H 0.053 0.947 25 H 0.054 0.946 26 H 0.056 0.944 27 H 0.055 0.945 28 H 0.055 0.945 29 H 0.053 0.947 30 H 0.059 0.941 31 H 0.055 0.945 32 H 0.059 0.941 33 H 0.073 0.927 34 H 0.101 0.899 35 H 0.400 0.600 36 H 0.138 0.862 37 H 0.143 0.857 38 H 0.126 0.874 39 H 0.377 0.623 40 H -0.250 1.250 41 H -0.255 1.255 42 H 0.148 0.852 43 H 0.099 0.901 44 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.257 1.385 0.805 4.548 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.059 4.059 3 C -0.199 4.199 4 C -0.205 4.205 5 C -0.118 4.118 6 H 0.105 0.895 7 C -0.181 4.181 8 C 0.013 3.987 9 H 0.123 0.877 10 N -0.358 5.358 11 C 0.350 3.650 12 O -0.401 6.401 13 C -0.131 4.131 14 C -0.074 4.074 15 C -0.174 4.174 16 Br 0.053 6.947 17 C -0.085 4.085 18 C -0.118 4.118 19 C -0.184 4.184 20 O -0.330 6.330 21 Si 0.582 3.418 22 C -0.036 4.036 23 C -0.189 4.189 24 H 0.073 0.927 25 H 0.073 0.927 26 H 0.075 0.925 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.072 0.928 30 H 0.078 0.922 31 H 0.074 0.926 32 H 0.078 0.922 33 H 0.091 0.909 34 H 0.119 0.881 35 H 0.236 0.764 36 H 0.156 0.844 37 H 0.160 0.840 38 H 0.143 0.857 39 H 0.225 0.775 40 H -0.175 1.175 41 H -0.180 1.180 42 H 0.166 0.834 43 H 0.117 0.883 44 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -3.722 0.971 1.268 4.050 hybrid contribution 0.519 1.039 -0.464 1.250 sum -3.203 2.009 0.804 3.865 Atomic orbital electron populations 1.21852 0.94403 1.01848 1.01762 1.20429 0.95547 0.95380 0.94561 1.21851 1.01079 0.95210 1.01738 1.22041 1.01200 1.00433 0.96867 1.22655 0.95942 0.94957 0.98222 0.89471 1.23458 0.95933 0.96486 1.02241 1.21934 0.97844 0.99768 0.79153 0.87742 1.45576 1.32273 1.50745 1.07239 1.18092 0.81001 0.79236 0.86631 1.90825 1.40081 1.40492 1.68747 1.19961 0.98398 1.01538 0.93238 1.21285 0.97498 0.96272 0.92325 1.21642 0.98567 1.02654 0.94525 1.96846 1.55574 1.68555 1.73727 1.21274 0.92735 0.94127 1.00358 1.20307 0.97812 0.99421 0.94304 1.25058 0.82562 1.00706 1.10050 1.86651 1.31870 1.29956 1.84549 0.95024 0.89618 0.82916 0.74217 1.21310 0.94925 0.94278 0.93063 1.23652 0.96633 0.96855 1.01774 0.92743 0.92656 0.92524 0.92612 0.92632 0.92770 0.92238 0.92599 0.92213 0.90879 0.88124 0.76434 0.84445 0.84020 0.85671 0.77490 1.17501 1.18022 0.83387 0.88288 0.91200 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.23 8.31 37.16 0.31 0.54 16 2 C -0.06 0.10 0.68 -154.50 -0.11 -0.01 16 3 C -0.14 0.17 8.43 37.16 0.31 0.48 16 4 C -0.15 0.23 7.49 37.15 0.28 0.51 16 5 C -0.10 0.21 2.91 -89.80 -0.26 -0.06 16 6 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 7 C -0.14 0.31 6.40 -25.91 -0.17 0.15 16 8 C 0.12 -0.06 4.33 -66.97 -0.29 -0.35 16 9 H 0.10 0.13 7.46 -51.93 -0.39 -0.26 16 10 N -0.71 0.47 5.22 -53.82 -0.28 0.19 16 11 C 0.56 1.12 7.77 -12.33 -0.10 1.02 16 12 O -0.52 -3.03 15.95 5.32 0.08 -2.95 16 13 C -0.13 -0.06 5.87 -104.97 -0.62 -0.68 16 14 C -0.05 0.06 9.28 -39.15 -0.36 -0.30 16 15 C -0.09 0.07 6.22 -39.57 -0.25 -0.17 16 16 Br -0.03 0.03 33.69 -68.01 -2.29 -2.27 16 17 C -0.07 0.07 8.40 -39.46 -0.33 -0.26 16 18 C -0.12 0.07 5.34 -104.69 -0.56 -0.48 16 19 C -0.07 0.08 2.80 36.00 0.10 0.18 16 20 O -0.52 -0.33 12.84 -35.23 -0.45 -0.78 16 21 Si 0.68 -1.18 29.87 -169.99 -5.08 -6.26 16 22 C -0.02 -0.01 9.23 -39.18 -0.36 -0.37 16 23 C -0.15 0.15 7.10 -25.77 -0.18 -0.03 16 24 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 25 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.06 -0.10 7.57 -51.93 -0.39 -0.49 16 27 H 0.05 -0.05 8.10 -51.93 -0.42 -0.47 16 28 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 29 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 30 H 0.06 -0.11 6.05 -51.92 -0.31 -0.42 16 31 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.06 -0.08 6.46 -51.93 -0.34 -0.42 16 33 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 34 H 0.10 -0.23 6.09 -51.93 -0.32 -0.55 16 35 H 0.40 -1.20 6.74 -40.82 -0.28 -1.48 16 36 H 0.14 -0.46 6.40 -52.49 -0.34 -0.80 16 37 H 0.14 -0.33 4.82 -52.49 -0.25 -0.58 16 38 H 0.13 -0.22 7.96 -51.93 -0.41 -0.64 16 39 H 0.38 -0.86 8.70 45.56 0.40 -0.46 16 40 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 41 H -0.26 0.01 7.00 56.52 0.40 0.41 16 42 H 0.15 0.25 7.65 -52.49 -0.40 -0.15 16 43 H 0.10 -0.11 5.70 -51.93 -0.30 -0.40 16 44 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 LS Contribution 367.08 15.07 5.53 5.53 Total: 0.00 -5.79 367.08 -11.39 -17.18 By element: Atomic # 1 Polarization: -4.48 SS G_CDS: -6.33 Total: -10.81 kcal Atomic # 6 Polarization: 2.73 SS G_CDS: -2.58 Total: 0.16 kcal Atomic # 7 Polarization: 0.47 SS G_CDS: -0.28 Total: 0.19 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -0.37 Total: -3.73 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.08 Total: -6.26 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -2.29 Total: -2.27 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -5.79 -11.39 -17.18 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_12335870.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.827 kcal (2) G-P(sol) polarization free energy of solvation -5.788 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.614 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.395 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.182 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.009 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds