Wall clock time and date at job start Tue Mar 9 2021 13:41:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35655 * 116.99767 * 2 1 4 4 C 1.40136 * 120.14967 * 180.02562 * 3 2 1 5 5 C 1.47546 * 120.19031 * 0.02562 * 4 3 2 6 6 O 1.21588 * 119.99770 * 359.97438 * 5 4 3 7 7 N 1.34771 * 119.99814 * 180.02562 * 5 4 3 8 8 C 1.46504 * 119.99734 * 179.97438 * 7 5 4 9 9 H 1.08992 * 112.90948 * 23.74468 * 8 7 5 10 10 C 1.53783 * 113.61091 * 155.00125 * 8 7 5 11 11 C 1.53780 * 87.08494 * 89.11611 * 10 8 7 12 12 H 1.08996 * 113.61450 * 270.79978 * 11 10 8 13 13 C 1.52998 * 113.61871 * 139.97800 * 11 10 8 14 14 C 1.52999 * 109.47086 * 64.96562 * 13 11 10 15 15 C 1.53004 * 109.47130 * 304.97110 * 13 11 10 16 16 C 1.52991 * 109.47313 * 184.96829 * 13 11 10 17 17 C 1.53777 * 87.07988 * 25.42772 * 11 10 8 18 18 C 1.39706 * 119.61949 * 180.29197 * 4 3 2 19 19 C 1.37785 * 119.90445 * 359.46632 * 18 4 3 20 20 C 1.50700 * 119.84978 * 180.24907 * 19 18 4 21 21 O 1.42902 * 109.47484 * 300.26149 * 20 19 18 22 22 Si 1.86298 * 109.47287 * 180.25623 * 20 19 18 23 23 C 1.38547 * 120.30121 * 0.51305 * 19 18 4 24 24 C 1.38052 * 120.39092 * 359.76387 * 23 19 18 25 25 H 1.08999 * 109.46991 * 180.02562 * 1 2 3 26 26 H 1.09001 * 109.46779 * 300.00406 * 1 2 3 27 27 H 1.08994 * 109.46946 * 60.00740 * 1 2 3 28 28 H 0.97002 * 120.00191 * 0.02562 * 7 5 4 29 29 H 1.09002 * 113.61812 * 334.56094 * 10 8 7 30 30 H 1.09006 * 113.68888 * 203.67686 * 10 8 7 31 31 H 1.09003 * 109.47529 * 300.00290 * 14 13 11 32 32 H 1.09003 * 109.46816 * 59.99971 * 14 13 11 33 33 H 1.08999 * 109.47282 * 180.02562 * 14 13 11 34 34 H 1.08998 * 109.47150 * 173.68938 * 15 13 11 35 35 H 1.08997 * 109.47061 * 293.69453 * 15 13 11 36 36 H 1.09006 * 109.47094 * 53.69140 * 15 13 11 37 37 H 1.09003 * 109.47384 * 299.99948 * 16 13 11 38 38 H 1.08996 * 109.47490 * 59.99960 * 16 13 11 39 39 H 1.08999 * 109.47199 * 180.02562 * 16 13 11 40 40 H 1.09009 * 113.61234 * 89.11978 * 17 11 10 41 41 H 1.09002 * 113.61748 * 220.01664 * 17 11 10 42 42 H 1.08001 * 120.04419 * 179.69702 * 18 4 3 43 43 H 1.09009 * 109.46740 * 60.26106 * 20 19 18 44 44 H 0.96698 * 113.99581 * 299.99751 * 21 20 19 45 45 H 1.48500 * 110.00034 * 180.02562 * 22 20 19 46 46 H 1.48499 * 110.00341 * 301.32712 * 22 20 19 47 47 H 1.08001 * 119.80359 * 179.74005 * 23 19 18 48 48 H 1.08002 * 119.95960 * 180.02562 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4441 1.2858 -0.0005 5 6 4.2551 0.0532 -0.0017 6 8 3.7095 -1.0334 -0.0017 7 7 5.6005 0.1318 -0.0017 8 6 6.4057 -1.0921 -0.0023 9 1 5.8712 -1.9515 -0.4069 10 6 7.8111 -0.9045 -0.5977 11 6 8.2771 -0.5351 0.8205 12 1 8.1909 0.5279 1.0454 13 6 9.6472 -1.1102 1.1848 14 6 10.7172 -0.4871 0.2861 15 6 9.6333 -2.6271 0.9846 16 6 9.9614 -0.7918 2.6479 17 6 7.0984 -1.3743 1.3414 18 6 4.0668 2.5364 0.0057 19 6 3.3037 3.6837 0.0011 20 6 3.9767 5.0321 0.0021 21 8 4.7923 5.1566 1.1689 22 14 2.6825 6.3721 0.0031 23 6 1.9206 3.6033 0.0011 24 6 1.2924 2.3740 0.0008 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5137 -0.8900 28 1 6.0357 0.9987 -0.0006 29 1 7.8781 -0.0803 -1.3079 30 1 8.2530 -1.8262 -0.9763 31 1 10.4934 -0.7140 -0.7563 32 1 10.7272 0.5935 0.4287 33 1 11.6933 -0.8972 0.5453 34 1 10.6376 -3.0227 1.1355 35 1 8.9517 -3.0821 1.7032 36 1 9.3005 -2.8569 -0.0276 37 1 9.9714 0.2888 2.7905 38 1 9.1992 -1.2357 3.2882 39 1 10.9377 -1.2012 2.9073 40 1 7.3443 -2.4253 1.4936 41 1 6.5899 -0.9294 2.1968 42 1 5.1447 2.6037 0.0102 43 1 4.5987 5.1283 -0.8879 44 1 4.3038 5.0809 2.0000 45 1 3.3334 7.7068 0.0034 46 1 1.8078 6.2343 -1.1891 47 1 1.3304 4.5078 0.0018 48 1 0.2138 2.3195 0.0004 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_12496546.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:41:44 Heat of formation + Delta-G solvation = -55.594817 kcal Electronic energy + Delta-G solvation = -27778.468869 eV Core-core repulsion = 23994.108236 eV Total energy + Delta-G solvation = -3784.360633 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.86380 -41.16212 -39.45194 -39.20210 -37.17826 -36.41799 -33.88104 -32.28994 -31.80239 -28.62093 -28.49024 -28.24200 -26.32766 -26.22287 -26.22112 -24.84018 -22.77749 -21.49774 -21.08312 -19.47760 -19.04952 -18.40444 -18.09089 -17.19543 -16.85521 -16.76071 -16.36265 -16.19725 -15.92370 -15.90127 -15.69369 -15.54444 -15.05667 -14.81064 -14.58465 -14.49158 -14.12397 -13.82913 -13.71086 -13.59242 -13.40997 -13.19505 -13.11700 -12.72935 -12.70738 -12.45024 -12.43794 -12.15293 -12.10841 -12.02984 -11.86162 -11.82845 -11.34286 -11.10001 -10.84341 -10.81220 -10.44051 -10.23264 -9.88305 -9.27626 -5.12451 -0.25202 0.18703 1.20820 1.54039 1.87534 1.90809 2.16711 2.22287 2.73557 3.34882 3.48570 3.54524 3.56506 3.60108 3.66149 3.74957 3.89561 3.96845 4.05751 4.06711 4.19030 4.19790 4.26386 4.27338 4.34001 4.46326 4.54302 4.56756 4.63310 4.69754 4.75925 4.76847 4.79161 4.85701 4.91794 4.93826 4.99423 5.02606 5.06708 5.12237 5.14555 5.18555 5.22590 5.27644 5.37498 5.46877 5.48278 5.50214 5.74753 6.28888 6.48618 6.60947 7.38906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.174 4.174 5 C 0.563 3.437 6 O -0.515 6.515 7 N -0.712 5.712 8 C 0.121 3.879 9 H 0.102 0.898 10 C -0.145 4.145 11 C -0.099 4.099 12 H 0.087 0.913 13 C -0.059 4.059 14 C -0.141 4.141 15 C -0.148 4.148 16 C -0.141 4.141 17 C -0.151 4.151 18 C -0.020 4.020 19 C -0.169 4.169 20 C -0.062 4.062 21 O -0.541 6.541 22 Si 0.686 3.314 23 C -0.048 4.048 24 C -0.214 4.214 25 H 0.105 0.895 26 H 0.059 0.941 27 H 0.058 0.942 28 H 0.398 0.602 29 H 0.071 0.929 30 H 0.099 0.901 31 H 0.055 0.945 32 H 0.053 0.947 33 H 0.054 0.946 34 H 0.054 0.946 35 H 0.059 0.941 36 H 0.059 0.941 37 H 0.053 0.947 38 H 0.055 0.945 39 H 0.054 0.946 40 H 0.097 0.903 41 H 0.069 0.931 42 H 0.135 0.865 43 H 0.115 0.885 44 H 0.380 0.620 45 H -0.253 1.253 46 H -0.257 1.257 47 H 0.134 0.866 48 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.336 2.669 1.551 3.363 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.178 4.178 5 C 0.351 3.649 6 O -0.390 6.390 7 N -0.365 5.365 8 C 0.016 3.984 9 H 0.120 0.880 10 C -0.183 4.183 11 C -0.117 4.117 12 H 0.105 0.895 13 C -0.059 4.059 14 C -0.199 4.199 15 C -0.205 4.205 16 C -0.199 4.199 17 C -0.189 4.189 18 C -0.039 4.039 19 C -0.170 4.170 20 C -0.173 4.173 21 O -0.346 6.346 22 Si 0.588 3.412 23 C -0.066 4.066 24 C -0.232 4.232 25 H 0.123 0.877 26 H 0.078 0.922 27 H 0.076 0.924 28 H 0.234 0.766 29 H 0.089 0.911 30 H 0.117 0.883 31 H 0.074 0.926 32 H 0.073 0.927 33 H 0.073 0.927 34 H 0.073 0.927 35 H 0.078 0.922 36 H 0.078 0.922 37 H 0.072 0.928 38 H 0.074 0.926 39 H 0.073 0.927 40 H 0.115 0.885 41 H 0.088 0.912 42 H 0.153 0.847 43 H 0.132 0.868 44 H 0.227 0.773 45 H -0.178 1.178 46 H -0.182 1.182 47 H 0.151 0.849 48 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.536 2.419 0.669 2.942 hybrid contribution 0.319 0.278 -0.335 0.539 sum -1.217 2.697 0.334 2.977 Atomic orbital electron populations 1.23238 0.78190 1.04770 1.01440 1.86388 1.21197 1.25179 1.86167 1.19091 0.90935 0.85067 0.90513 1.19342 0.90903 0.93886 1.13665 1.17940 0.81814 0.88654 0.76510 1.90843 1.71457 1.28589 1.48131 1.45574 1.05678 1.09155 1.76083 1.21799 0.91041 0.88189 0.97361 0.87969 1.23468 0.94856 1.03002 0.96943 1.22637 0.93700 0.99485 0.95875 0.89458 1.20422 0.94332 0.95514 0.95627 1.21851 0.98066 1.00545 0.99400 1.22043 1.01814 0.94751 1.01931 1.21844 1.01416 1.01410 0.95180 1.23593 0.96331 1.01463 0.97514 1.20957 0.99888 0.89852 0.93153 1.20121 0.93537 0.96023 1.07286 1.24963 1.01837 0.99236 0.91275 1.86500 1.37304 1.95376 1.15422 0.94786 0.80205 0.77647 0.88545 1.20992 0.93649 0.97336 0.94591 1.21233 1.00747 0.91562 1.09699 0.87659 0.92248 0.92352 0.76640 0.91053 0.88272 0.92578 0.92749 0.92700 0.92662 0.92209 0.92244 0.92754 0.92588 0.92699 0.88500 0.91232 0.84738 0.86810 0.77286 1.17815 1.18237 0.84905 0.84121 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.28 -1.03 8.57 -40.55 -0.35 -1.38 16 3 C 0.19 0.48 6.70 -38.70 -0.26 0.22 16 4 C -0.17 -0.43 5.89 -104.84 -0.62 -1.04 16 5 C 0.56 2.29 7.76 -12.47 -0.10 2.20 16 6 O -0.51 -4.06 14.76 -16.59 -0.24 -4.31 16 7 N -0.71 -0.77 5.21 -54.05 -0.28 -1.05 16 8 C 0.12 0.11 4.32 -67.11 -0.29 -0.18 16 9 H 0.10 0.29 7.46 -51.93 -0.39 -0.10 16 10 C -0.14 0.13 6.46 -25.92 -0.17 -0.04 16 11 C -0.10 0.09 2.91 -89.81 -0.26 -0.17 16 12 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 13 C -0.06 0.05 0.68 -154.51 -0.10 -0.06 16 14 C -0.14 0.11 8.33 37.16 0.31 0.42 16 15 C -0.15 0.12 7.53 37.16 0.28 0.40 16 16 C -0.14 0.07 8.42 37.15 0.31 0.38 16 17 C -0.15 -0.02 7.04 -25.92 -0.18 -0.20 16 18 C -0.02 0.00 9.08 -39.20 -0.36 -0.36 16 19 C -0.17 0.13 5.39 -104.67 -0.56 -0.44 16 20 C -0.06 0.09 2.81 36.01 0.10 0.19 16 21 O -0.54 0.58 12.76 -35.23 -0.45 0.13 16 22 Si 0.69 -1.37 29.77 -169.99 -5.06 -6.43 16 23 C -0.05 0.06 8.66 -39.54 -0.34 -0.29 16 24 C -0.21 0.05 9.03 -39.48 -0.36 -0.31 16 25 H 0.11 -0.17 8.14 -51.93 -0.42 -0.60 16 26 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 27 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 28 H 0.40 -0.46 6.73 -40.82 -0.27 -0.74 16 29 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.10 -0.12 6.02 -51.93 -0.31 -0.43 16 31 H 0.06 -0.05 7.61 -51.93 -0.39 -0.44 16 32 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 35 H 0.06 -0.04 6.43 -51.93 -0.33 -0.37 16 36 H 0.06 -0.06 6.00 -51.93 -0.31 -0.37 16 37 H 0.05 -0.02 8.14 -51.93 -0.42 -0.45 16 38 H 0.06 -0.01 8.05 -51.93 -0.42 -0.43 16 39 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 40 H 0.10 -0.01 5.72 -51.92 -0.30 -0.30 16 41 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 42 H 0.13 -0.21 6.40 -52.49 -0.34 -0.55 16 43 H 0.11 -0.13 7.96 -51.92 -0.41 -0.54 16 44 H 0.38 -1.77 8.70 45.56 0.40 -1.37 16 45 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 46 H -0.26 -0.07 7.11 56.52 0.40 0.33 16 47 H 0.13 -0.44 4.85 -52.49 -0.25 -0.70 16 48 H 0.14 -0.35 6.30 -52.49 -0.33 -0.68 16 LS Contribution 372.94 15.07 5.62 5.62 Total: 0.00 -7.80 372.94 -9.83 -17.63 By element: Atomic # 1 Polarization: -4.46 SS G_CDS: -7.47 Total: -11.92 kcal Atomic # 6 Polarization: 3.31 SS G_CDS: -1.60 Total: 1.71 kcal Atomic # 7 Polarization: -0.77 SS G_CDS: -0.28 Total: -1.05 kcal Atomic # 8 Polarization: -4.51 SS G_CDS: -1.04 Total: -5.56 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: -5.06 Total: -6.43 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -7.80 -9.83 -17.63 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_12496546.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.962 kcal (2) G-P(sol) polarization free energy of solvation -7.799 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.761 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.834 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.633 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.595 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds