Wall clock time and date at job start Tue Mar 9 2021 13:41:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52996 * 109.46950 * 2 1 4 4 C 1.52994 * 109.46854 * 239.99659 * 2 1 3 5 5 C 1.52995 * 109.46932 * 119.99617 * 2 1 3 6 6 H 1.08998 * 112.84896 * 186.22659 * 5 2 1 7 7 C 1.54049 * 113.62196 * 317.54189 * 5 2 1 8 8 C 1.53783 * 86.98665 * 139.97876 * 7 5 2 9 9 H 1.09000 * 113.61899 * 219.98387 * 8 7 5 10 10 N 1.46505 * 113.61783 * 89.16047 * 8 7 5 11 11 C 1.34774 * 119.99726 * 105.86204 * 10 8 7 12 12 O 1.21560 * 120.00178 * 0.02562 * 11 10 8 13 13 C 1.47727 * 119.99681 * 180.02562 * 11 10 8 14 14 C 1.39631 * 120.11519 * 179.97438 * 13 11 10 15 15 C 1.37858 * 119.87396 * 180.02562 * 14 13 11 16 16 C 1.50699 * 119.93761 * 180.02562 * 15 14 13 17 17 O 1.42903 * 109.47028 * 14.97542 * 16 15 14 18 18 Si 1.86300 * 109.47278 * 134.97577 * 16 15 14 19 19 C 1.38633 * 120.12264 * 359.97438 * 15 14 13 20 20 F 1.35102 * 119.87912 * 180.27968 * 19 15 14 21 21 C 1.38680 * 120.23897 * 0.02562 * 19 15 14 22 22 C 1.37820 * 120.11733 * 359.97438 * 21 19 15 23 23 C 1.53783 * 87.17402 * 334.57068 * 8 7 5 24 24 H 1.09006 * 109.47470 * 306.30032 * 1 2 3 25 25 H 1.09003 * 109.47300 * 66.29419 * 1 2 3 26 26 H 1.08997 * 109.47456 * 186.29892 * 1 2 3 27 27 H 1.09001 * 109.47247 * 180.02562 * 3 2 1 28 28 H 1.09008 * 109.47086 * 299.99739 * 3 2 1 29 29 H 1.09001 * 109.47535 * 60.00021 * 3 2 1 30 30 H 1.09001 * 109.47423 * 300.00002 * 4 2 1 31 31 H 1.09003 * 109.47495 * 60.00641 * 4 2 1 32 32 H 1.09001 * 109.46723 * 179.97438 * 4 2 1 33 33 H 1.09001 * 113.61378 * 25.47728 * 7 5 2 34 34 H 1.09004 * 113.69545 * 254.49100 * 7 5 2 35 35 H 0.96997 * 119.99559 * 285.86538 * 10 8 7 36 36 H 1.07998 * 120.06344 * 0.04293 * 14 13 11 37 37 H 1.09001 * 109.47536 * 254.97633 * 16 15 14 38 38 H 0.96704 * 113.99847 * 60.00777 * 17 16 15 39 39 H 1.48499 * 110.00235 * 58.67977 * 18 16 15 40 40 H 1.48503 * 110.00412 * 180.02562 * 18 16 15 41 41 H 1.07998 * 119.93958 * 179.97438 * 21 19 15 42 42 H 1.08000 * 120.05759 * 179.97438 * 22 21 19 43 43 H 1.08998 * 113.61643 * 140.01899 * 23 8 7 44 44 H 1.08999 * 113.61484 * 270.84560 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0399 -0.7213 -1.2492 5 6 2.0399 -0.7211 1.2493 6 1 3.1224 -0.6599 1.3611 7 6 1.2639 -0.3605 2.5302 8 6 1.3630 -1.8469 2.9116 9 1 0.4539 -2.2433 3.3638 10 7 2.5690 -2.1780 3.6747 11 6 2.4830 -2.4262 4.9966 12 8 1.4047 -2.3759 5.5556 13 6 3.6992 -2.7594 5.7662 14 6 3.6130 -3.0166 7.1359 15 6 4.7511 -3.3265 7.8493 16 6 4.6597 -3.6049 9.3276 17 8 3.2951 -3.8315 9.6860 18 14 5.6690 -5.1159 9.7386 19 6 5.9795 -3.3837 7.2092 20 9 7.0909 -3.6935 7.9120 21 6 6.0707 -3.1292 5.8490 22 6 4.9392 -2.8184 5.1262 23 6 1.4840 -2.1462 1.4080 24 1 -0.3634 0.6084 0.8282 25 1 -0.3634 0.4132 -0.9410 26 1 -0.3634 -1.0214 0.1127 27 1 3.1299 1.4425 -0.0005 28 1 1.6766 1.9563 -0.8901 29 1 1.6766 1.9564 0.8900 30 1 1.6766 -1.7490 -1.2491 31 1 1.6767 -0.2075 -2.1392 32 1 3.1299 -0.7209 -1.2494 33 1 0.2439 -0.0249 2.3429 34 1 1.8113 0.3002 3.2026 35 1 3.4293 -2.2184 3.2285 36 1 2.6565 -2.9730 7.6354 37 1 5.0439 -2.7492 9.8829 38 1 2.8875 -4.5800 9.2291 39 1 7.0842 -4.9049 9.3414 40 1 5.5866 -5.4014 11.1936 41 1 7.0302 -3.1747 5.3553 42 1 5.0114 -2.6200 4.0670 43 1 2.2089 -2.9261 1.1750 44 1 0.5242 -2.2993 0.9147 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664192_12496548.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:41:46 Heat of formation + Delta-G solvation = -54.083150 kcal Electronic energy + Delta-G solvation = -25527.841070 eV Core-core repulsion = 21748.311823 eV Total energy + Delta-G solvation = -3779.529247 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.157 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -50.42843 -41.78592 -40.72509 -39.45287 -37.70935 -36.54205 -34.04443 -32.54682 -31.79925 -28.42208 -28.18573 -27.25045 -26.27813 -26.18040 -24.64225 -23.26028 -21.72048 -21.19559 -19.32087 -19.12848 -18.74566 -17.95323 -17.73417 -17.14451 -16.94739 -16.43332 -16.13333 -15.96282 -15.80282 -15.70407 -15.16328 -15.10340 -15.04812 -14.74569 -14.24587 -14.05362 -13.77714 -13.75952 -13.55746 -13.35412 -13.14380 -12.81213 -12.71556 -12.66941 -12.37403 -12.35998 -11.99462 -11.82134 -11.45236 -11.32076 -11.12748 -11.07918 -10.92343 -10.83764 -10.19381 -10.01878 -9.71021 -5.04426 -0.51694 0.02068 1.20504 1.58521 1.61658 1.93425 2.00414 2.57967 2.98765 3.24606 3.33300 3.54315 3.57850 3.60609 3.69013 3.79670 3.89685 3.98721 4.08648 4.10836 4.30085 4.32279 4.34272 4.55634 4.58935 4.75853 4.77474 4.79241 4.80671 4.85463 4.87467 4.89450 4.99918 5.01630 5.02922 5.06221 5.09282 5.16998 5.18102 5.24550 5.28373 5.43724 5.48219 5.53870 5.60114 5.71487 6.44168 6.60469 7.11377 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.057 4.057 3 C -0.142 4.142 4 C -0.140 4.140 5 C -0.090 4.090 6 H 0.098 0.902 7 C -0.151 4.151 8 C 0.112 3.888 9 H 0.081 0.919 10 N -0.692 5.692 11 C 0.561 3.439 12 O -0.576 6.576 13 C -0.150 4.150 14 C -0.029 4.029 15 C -0.157 4.157 16 C -0.072 4.072 17 O -0.551 6.551 18 Si 0.764 3.236 19 C 0.105 3.895 20 F -0.130 7.130 21 C -0.145 4.145 22 C -0.045 4.045 23 C -0.131 4.131 24 H 0.055 0.945 25 H 0.051 0.949 26 H 0.064 0.936 27 H 0.056 0.944 28 H 0.051 0.949 29 H 0.049 0.951 30 H 0.060 0.940 31 H 0.049 0.951 32 H 0.057 0.943 33 H 0.095 0.905 34 H 0.058 0.942 35 H 0.415 0.585 36 H 0.143 0.857 37 H 0.114 0.886 38 H 0.397 0.603 39 H -0.255 1.255 40 H -0.304 1.304 41 H 0.171 0.829 42 H 0.172 0.828 43 H 0.086 0.914 44 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.637 -1.869 -7.331 8.012 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.057 4.057 3 C -0.199 4.199 4 C -0.197 4.197 5 C -0.108 4.108 6 H 0.116 0.884 7 C -0.190 4.190 8 C 0.007 3.993 9 H 0.099 0.901 10 N -0.344 5.344 11 C 0.349 3.651 12 O -0.456 6.456 13 C -0.153 4.153 14 C -0.047 4.047 15 C -0.158 4.158 16 C -0.181 4.181 17 O -0.359 6.359 18 Si 0.668 3.332 19 C 0.086 3.914 20 F -0.109 7.109 21 C -0.163 4.163 22 C -0.063 4.063 23 C -0.169 4.169 24 H 0.074 0.926 25 H 0.070 0.930 26 H 0.082 0.918 27 H 0.075 0.925 28 H 0.070 0.930 29 H 0.069 0.931 30 H 0.079 0.921 31 H 0.068 0.932 32 H 0.076 0.924 33 H 0.114 0.886 34 H 0.077 0.923 35 H 0.254 0.746 36 H 0.160 0.840 37 H 0.131 0.869 38 H 0.247 0.753 39 H -0.180 1.180 40 H -0.233 1.233 41 H 0.189 0.811 42 H 0.189 0.811 43 H 0.104 0.896 44 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 2.687 -1.650 -6.124 6.888 hybrid contribution 0.336 0.865 0.299 0.975 sum 3.022 -0.785 -5.825 6.610 Atomic orbital electron populations 1.22056 0.94873 1.02225 1.01537 1.20404 0.95388 0.95116 0.94836 1.21852 1.01037 0.95627 1.01399 1.21836 1.01120 1.00394 0.96378 1.22653 0.99786 0.95086 0.93274 0.88414 1.23629 1.02052 0.95834 0.97451 1.21888 0.88125 0.96682 0.92611 0.90078 1.45456 1.11572 1.69835 1.07507 1.18378 0.88223 0.76002 0.82456 1.90797 1.30720 1.53565 1.70509 1.19953 0.93783 1.07123 0.94456 1.20892 0.98581 0.92854 0.92423 1.20268 0.92492 1.05378 0.97668 1.25094 0.90941 1.10113 0.91970 1.86479 1.23899 1.56304 1.69233 0.94327 0.78234 0.81010 0.79665 1.18010 0.81860 1.00438 0.91126 1.91560 1.51529 1.89709 1.78095 1.21393 1.01820 1.01823 0.91287 1.21478 0.89445 0.93927 1.01450 1.23402 1.03374 0.97477 0.92662 0.92625 0.92973 0.91761 0.92466 0.93015 0.93140 0.92113 0.93163 0.92389 0.88633 0.92304 0.74643 0.83962 0.86881 0.75276 1.18044 1.23271 0.81126 0.81054 0.89566 0.87926 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.54 7.53 71.98 0.54 1.09 16 2 C -0.06 0.26 0.68 -52.19 -0.04 0.23 16 3 C -0.14 0.45 8.42 71.98 0.61 1.05 16 4 C -0.14 0.69 8.33 71.98 0.60 1.29 16 5 C -0.09 0.53 2.92 -10.17 -0.03 0.50 16 6 H 0.10 -0.74 8.14 -2.39 -0.02 -0.76 16 7 C -0.15 0.34 7.06 31.21 0.22 0.56 16 8 C 0.11 -0.20 4.30 45.52 0.20 0.00 16 9 H 0.08 0.26 7.50 -2.39 -0.02 0.25 16 10 N -0.69 2.14 5.21 -443.01 -2.31 -0.17 16 11 C 0.56 1.93 7.77 86.75 0.67 2.60 16 12 O -0.58 -7.26 15.96 -3.91 -0.06 -7.32 16 13 C -0.15 0.03 5.87 -20.09 -0.12 -0.08 16 14 C -0.03 -0.06 8.78 22.52 0.20 0.14 16 15 C -0.16 -0.12 5.13 -19.86 -0.10 -0.22 16 16 C -0.07 -0.10 2.97 71.24 0.21 0.11 16 17 O -0.55 -1.15 11.64 -148.98 -1.73 -2.88 16 18 Si 0.76 0.09 30.81 68.60 2.11 2.21 16 19 C 0.11 -0.03 6.68 22.47 0.15 0.12 16 20 F -0.13 -0.37 12.80 44.97 0.58 0.21 16 21 C -0.14 0.77 10.01 22.28 0.22 0.99 16 22 C -0.04 0.29 9.54 22.52 0.21 0.51 16 23 C -0.13 0.83 6.45 31.12 0.20 1.03 16 24 H 0.05 -0.15 6.43 -2.38 -0.02 -0.17 16 25 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 26 H 0.06 -0.29 6.00 -2.39 -0.01 -0.30 16 27 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 28 H 0.05 -0.12 8.14 -2.38 -0.02 -0.14 16 29 H 0.05 -0.10 8.06 -2.39 -0.02 -0.12 16 30 H 0.06 -0.34 7.61 -2.39 -0.02 -0.35 16 31 H 0.05 -0.18 8.14 -2.39 -0.02 -0.20 16 32 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 33 H 0.10 -0.16 5.73 -2.39 -0.01 -0.18 16 34 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 35 H 0.41 -4.06 6.73 -92.71 -0.62 -4.68 16 36 H 0.14 0.63 6.66 -2.91 -0.02 0.61 16 37 H 0.11 0.31 7.96 -2.39 -0.02 0.29 16 38 H 0.40 -2.30 8.43 -74.05 -0.62 -2.93 16 39 H -0.25 -1.09 5.27 99.48 0.52 -0.57 16 40 H -0.30 -2.33 7.11 99.48 0.71 -1.62 16 41 H 0.17 -1.74 8.06 -2.91 -0.02 -1.76 16 42 H 0.17 -2.42 6.40 -2.91 -0.02 -2.44 16 43 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 44 H 0.10 -0.64 6.02 -2.39 -0.01 -0.66 16 Total: 0.00 -17.22 347.93 1.97 -15.25 By element: Atomic # 1 Polarization: -16.85 SS G_CDS: -0.37 Total: -17.22 kcal Atomic # 6 Polarization: 6.17 SS G_CDS: 3.75 Total: 9.92 kcal Atomic # 7 Polarization: 2.14 SS G_CDS: -2.31 Total: -0.17 kcal Atomic # 8 Polarization: -8.40 SS G_CDS: -1.80 Total: -10.20 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.58 Total: 0.21 kcal Atomic # 14 Polarization: 0.09 SS G_CDS: 2.11 Total: 2.21 kcal Total: -17.22 1.97 -15.25 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_12496548.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.833 kcal (2) G-P(sol) polarization free energy of solvation -17.216 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.049 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.966 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.250 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.083 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds