Wall clock time and date at job start Tue Mar 9 2021 13:41:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53003 * 109.47385 * 2 1 4 4 C 1.53000 * 109.47148 * 239.99961 * 2 1 3 5 5 C 1.53001 * 109.47354 * 119.99956 * 2 1 3 6 6 H 1.09000 * 112.84952 * 292.45685 * 5 2 1 7 7 C 1.53785 * 113.61220 * 63.65427 * 5 2 1 8 8 C 1.53782 * 87.08133 * 139.98308 * 7 5 2 9 9 H 1.08999 * 113.61095 * 219.93199 * 8 7 5 10 10 N 1.46502 * 113.61311 * 89.11449 * 8 7 5 11 11 C 1.34781 * 119.99523 * 156.25497 * 10 8 7 12 12 O 1.21619 * 120.00054 * 0.27468 * 11 10 8 13 13 C 1.47288 * 119.99555 * 180.27648 * 11 10 8 14 14 C 1.40368 * 120.04568 * 179.97438 * 13 11 10 15 15 O 1.35679 * 120.13631 * 359.97438 * 14 13 11 16 16 C 1.38315 * 119.72494 * 179.97438 * 14 13 11 17 17 C 1.39560 * 119.81775 * 0.02562 * 16 14 13 18 18 C 1.47566 * 119.95903 * 179.97438 * 17 16 14 19 19 C 1.36109 * 125.94665 * 179.97438 * 18 17 16 20 20 C 1.40800 * 106.73421 * 179.97438 * 19 18 17 21 21 C 1.34832 * 107.04775 * 0.02562 * 20 19 18 22 22 C 1.50703 * 125.65079 * 179.97438 * 21 20 19 23 23 O 1.42902 * 109.47068 * 64.99917 * 22 21 20 24 24 Si 1.86299 * 109.47299 * 184.99897 * 22 21 20 25 25 O 1.34234 * 108.69849 * 359.73446 * 21 20 19 26 26 C 1.39958 * 120.08704 * 359.97438 * 17 16 14 27 27 C 1.36393 * 120.27999 * 359.71589 * 26 17 16 28 28 C 1.53786 * 87.17236 * 334.52348 * 8 7 5 29 29 H 1.08998 * 109.47126 * 300.00247 * 1 2 3 30 30 H 1.09007 * 109.47047 * 59.99805 * 1 2 3 31 31 H 1.08998 * 109.46746 * 179.97438 * 1 2 3 32 32 H 1.08993 * 109.47407 * 179.97438 * 3 2 1 33 33 H 1.09003 * 109.46747 * 300.00293 * 3 2 1 34 34 H 1.08998 * 109.46666 * 59.99763 * 3 2 1 35 35 H 1.09002 * 109.47574 * 293.49903 * 4 2 1 36 36 H 1.09003 * 109.47010 * 53.50277 * 4 2 1 37 37 H 1.09004 * 109.47273 * 173.49481 * 4 2 1 38 38 H 1.09002 * 113.61542 * 25.42726 * 7 5 2 39 39 H 1.09000 * 113.61439 * 254.53216 * 7 5 2 40 40 H 0.97000 * 119.99794 * 336.52557 * 10 8 7 41 41 H 0.96705 * 114.00113 * 89.99777 * 15 14 13 42 42 H 1.08008 * 120.08832 * 179.97438 * 16 14 13 43 43 H 1.08000 * 126.62967 * 0.02997 * 19 18 17 44 44 H 1.08001 * 126.47475 * 179.97438 * 20 19 18 45 45 H 1.09000 * 109.46837 * 304.99626 * 22 21 20 46 46 H 0.96699 * 113.99705 * 180.02562 * 23 22 21 47 47 H 1.48494 * 110.00273 * 178.68241 * 24 22 21 48 48 H 1.48501 * 110.00111 * 300.00170 * 24 22 21 49 49 H 1.08005 * 119.86557 * 180.02562 * 26 17 16 50 50 H 1.07998 * 119.90810 * 180.27511 * 27 26 17 51 51 H 1.09000 * 113.61341 * 140.02351 * 28 8 7 52 52 H 1.08993 * 113.61325 * 270.92759 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 6 2.0400 -0.7212 1.2492 6 1 1.8194 -0.1808 2.1697 7 6 1.6558 -2.2094 1.3014 8 6 3.0661 -2.4732 1.8548 9 1 3.5305 -3.3745 1.4547 10 7 3.1483 -2.3910 3.3152 11 6 4.1313 -3.0381 3.9722 12 8 4.9529 -3.6861 3.3523 13 6 4.2103 -2.9604 5.4409 14 6 5.2333 -3.6343 6.1263 15 8 6.1512 -4.3591 5.4386 16 6 5.3016 -3.5564 7.5056 17 6 4.3535 -2.8094 8.2062 18 6 4.4231 -2.7246 9.6778 19 6 3.5671 -2.0341 10.4797 20 6 4.0052 -2.2293 11.8035 21 6 5.0956 -3.0203 11.7464 22 6 5.9011 -3.4924 12.9294 23 8 5.0954 -4.3464 13.7440 24 14 7.3929 -4.4332 12.3293 25 8 5.3417 -3.3219 10.4618 26 6 3.3368 -2.1406 7.5150 27 6 3.2696 -2.2096 6.1544 28 6 3.5052 -1.1845 1.1395 29 1 -0.3633 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 3.1300 1.4425 0.0005 33 1 1.6767 1.9563 -0.8900 34 1 1.6767 1.9563 0.8900 35 1 1.7748 -1.7770 -1.1930 36 1 1.5848 -0.2789 -2.1354 37 1 3.1238 -0.6215 -1.3094 38 1 1.4823 -2.6502 0.3197 39 1 0.8595 -2.4301 2.0122 40 1 2.4930 -1.8741 3.8094 41 1 6.9324 -3.8545 5.1734 42 1 6.0859 -4.0730 8.0389 43 1 2.7159 -1.4502 10.1620 44 1 3.5536 -1.8216 12.6959 45 1 6.2255 -2.6320 13.5147 46 1 5.5505 -4.6880 14.5259 47 1 8.2125 -4.8769 13.4854 48 1 6.9642 -5.6088 11.5297 49 1 2.6052 -1.5631 8.0608 50 1 2.4852 -1.6875 5.6268 51 1 4.2009 -0.5784 1.7198 52 1 3.8364 -1.3457 0.1137 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_12807986.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:41:58 Heat of formation + Delta-G solvation = -39.776789 kcal Electronic energy + Delta-G solvation = -33176.099291 eV Core-core repulsion = 28689.063966 eV Total energy + Delta-G solvation = -4487.035325 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.182 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -43.70833 -41.79919 -40.91793 -39.25378 -38.15145 -37.82557 -36.45737 -34.36302 -34.01418 -32.90222 -31.31539 -30.50843 -28.54833 -28.28718 -27.24068 -26.30583 -25.90357 -24.34057 -24.04638 -22.52463 -21.98346 -21.34582 -21.12294 -19.62735 -19.11385 -18.86405 -18.70994 -18.00019 -17.23806 -17.05465 -16.71465 -16.58696 -16.38626 -15.99568 -15.94759 -15.79217 -15.70144 -15.30144 -15.04885 -14.84160 -14.48123 -14.32393 -14.09748 -14.05050 -13.98868 -13.86962 -13.65058 -13.51084 -13.46834 -13.20416 -12.82885 -12.80211 -12.75685 -12.70920 -12.49014 -12.09239 -12.06728 -11.92109 -11.80885 -11.39686 -11.16417 -11.10670 -10.90684 -10.78209 -10.74044 -10.57174 -10.00944 -9.93370 -8.98965 -5.03085 -0.76700 0.12517 0.65940 1.08163 1.35257 1.45879 1.68530 1.92703 2.00748 2.07163 2.65695 3.00655 3.19184 3.46397 3.47222 3.50273 3.55955 3.64504 3.69763 3.77639 3.84396 3.92526 3.96268 4.00236 4.12008 4.19646 4.21819 4.22743 4.38839 4.48399 4.58213 4.65241 4.68393 4.70749 4.71309 4.74114 4.77676 4.82180 4.87486 4.88832 4.93958 4.97490 5.01086 5.06428 5.08317 5.10185 5.13480 5.17964 5.21986 5.33027 5.40135 5.41959 5.42803 5.47881 5.66713 6.00643 6.23608 6.48731 6.70972 7.25798 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.060 4.060 3 C -0.141 4.141 4 C -0.148 4.148 5 C -0.099 4.099 6 H 0.087 0.913 7 C -0.144 4.144 8 C 0.120 3.880 9 H 0.102 0.898 10 N -0.711 5.711 11 C 0.561 3.439 12 O -0.516 6.516 13 C -0.166 4.166 14 C 0.179 3.821 15 O -0.474 6.474 16 C -0.141 4.141 17 C 0.032 3.968 18 C 0.024 3.976 19 C -0.176 4.176 20 C -0.172 4.172 21 C 0.003 3.997 22 C -0.038 4.038 23 O -0.533 6.533 24 Si 0.694 3.306 25 O -0.161 6.161 26 C -0.116 4.116 27 C -0.064 4.064 28 C -0.150 4.150 29 H 0.053 0.947 30 H 0.054 0.946 31 H 0.055 0.945 32 H 0.055 0.945 33 H 0.054 0.946 34 H 0.053 0.947 35 H 0.059 0.941 36 H 0.055 0.945 37 H 0.059 0.941 38 H 0.099 0.901 39 H 0.072 0.928 40 H 0.398 0.602 41 H 0.399 0.601 42 H 0.144 0.856 43 H 0.157 0.843 44 H 0.155 0.845 45 H 0.099 0.901 46 H 0.388 0.612 47 H -0.251 1.251 48 H -0.250 1.250 49 H 0.139 0.861 50 H 0.135 0.865 51 H 0.069 0.931 52 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.789 5.931 1.638 6.203 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.060 4.060 3 C -0.198 4.198 4 C -0.205 4.205 5 C -0.117 4.117 6 H 0.105 0.895 7 C -0.182 4.182 8 C 0.015 3.985 9 H 0.120 0.880 10 N -0.363 5.363 11 C 0.348 3.652 12 O -0.392 6.392 13 C -0.169 4.169 14 C 0.132 3.868 15 O -0.285 6.285 16 C -0.159 4.159 17 C 0.031 3.969 18 C -0.026 4.026 19 C -0.195 4.195 20 C -0.191 4.191 21 C -0.047 4.047 22 C -0.147 4.147 23 O -0.342 6.342 24 Si 0.593 3.407 25 O -0.058 6.058 26 C -0.134 4.134 27 C -0.083 4.083 28 C -0.189 4.189 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.075 0.925 32 H 0.074 0.926 33 H 0.073 0.927 34 H 0.072 0.928 35 H 0.078 0.922 36 H 0.074 0.926 37 H 0.078 0.922 38 H 0.118 0.882 39 H 0.090 0.910 40 H 0.234 0.766 41 H 0.258 0.742 42 H 0.162 0.838 43 H 0.175 0.825 44 H 0.173 0.827 45 H 0.116 0.884 46 H 0.238 0.762 47 H -0.175 1.175 48 H -0.174 1.174 49 H 0.157 0.843 50 H 0.153 0.847 51 H 0.088 0.912 52 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -0.337 4.170 0.689 4.240 hybrid contribution -0.753 0.414 1.421 1.660 sum -1.090 4.584 2.110 5.163 Atomic orbital electron populations 1.21849 0.94438 1.01832 1.01721 1.20432 0.95520 0.95387 0.94624 1.21845 1.01076 0.95203 1.01697 1.22039 1.01199 1.00435 0.96842 1.22692 0.95973 0.94904 0.98118 0.89483 1.23455 0.96040 0.96494 1.02202 1.21833 0.97616 0.99593 0.79484 0.87972 1.45592 1.31115 1.52583 1.07004 1.17963 0.81398 0.79130 0.86671 1.90843 1.39564 1.40198 1.68594 1.20479 1.00032 1.02799 0.93613 1.18277 0.90138 0.89199 0.89140 1.84776 1.32378 1.37071 1.74322 1.21597 1.00681 1.00288 0.93360 1.17743 0.95273 0.96947 0.86921 1.20289 0.91691 1.00431 0.90190 1.21893 1.01764 1.03493 0.92348 1.21536 0.96932 1.02305 0.98329 1.21353 0.99662 1.01273 0.82400 1.23811 1.01156 0.99529 0.90186 1.86570 1.40706 1.66707 1.40202 0.94537 0.78186 0.84073 0.83891 1.83923 1.46869 1.58664 1.16349 1.20697 0.98182 1.00581 0.93952 1.20805 0.97192 0.96439 0.93872 1.23643 0.96532 0.96991 1.01706 0.92769 0.92682 0.92543 0.92605 0.92670 0.92791 0.92250 0.92640 0.92208 0.88227 0.90968 0.76601 0.74240 0.83809 0.82542 0.82719 0.88380 0.76233 1.17546 1.17392 0.84328 0.84681 0.91237 0.88416 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.21 8.31 37.16 0.31 0.52 16 2 C -0.06 0.09 0.68 -154.51 -0.11 -0.01 16 3 C -0.14 0.17 8.43 37.16 0.31 0.49 16 4 C -0.15 0.21 7.48 37.16 0.28 0.49 16 5 C -0.10 0.19 2.93 -89.66 -0.26 -0.07 16 6 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 7 C -0.14 0.26 6.40 -25.92 -0.17 0.09 16 8 C 0.12 -0.01 4.30 -67.11 -0.29 -0.30 16 9 H 0.10 0.20 7.50 -51.93 -0.39 -0.19 16 10 N -0.71 0.14 5.21 -54.13 -0.28 -0.14 16 11 C 0.56 1.54 7.75 -12.58 -0.10 1.45 16 12 O -0.52 -3.31 14.76 -16.70 -0.25 -3.56 16 13 C -0.17 -0.24 5.89 -104.79 -0.62 -0.85 16 14 C 0.18 0.40 6.71 -38.75 -0.26 0.14 16 15 O -0.47 -1.41 11.56 -40.70 -0.47 -1.88 16 16 C -0.14 -0.21 9.65 -39.06 -0.38 -0.59 16 17 C 0.03 0.03 5.87 -104.96 -0.62 -0.59 16 18 C 0.02 0.04 7.02 -36.54 -0.26 -0.22 16 19 C -0.18 -0.12 10.26 -39.38 -0.40 -0.52 16 20 C -0.17 -0.22 10.78 -39.82 -0.43 -0.64 16 21 C 0.00 0.01 6.24 -35.51 -0.22 -0.22 16 22 C -0.04 0.02 2.97 36.01 0.11 0.12 16 23 O -0.53 -0.32 12.86 -35.23 -0.45 -0.77 16 24 Si 0.69 -0.46 32.11 -169.99 -5.46 -5.92 16 25 O -0.16 -0.41 8.79 4.71 0.04 -0.37 16 26 C -0.12 0.13 9.48 -39.60 -0.38 -0.25 16 27 C -0.06 0.08 9.47 -39.62 -0.38 -0.29 16 28 C -0.15 0.12 7.11 -25.77 -0.18 -0.06 16 29 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 30 H 0.05 -0.06 8.14 -51.92 -0.42 -0.49 16 31 H 0.06 -0.09 7.56 -51.93 -0.39 -0.48 16 32 H 0.05 -0.05 8.11 -51.93 -0.42 -0.47 16 33 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 34 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 35 H 0.06 -0.09 6.05 -51.93 -0.31 -0.41 16 36 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.06 -0.08 6.46 -51.93 -0.34 -0.41 16 38 H 0.10 -0.19 6.09 -51.93 -0.32 -0.50 16 39 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.40 -1.11 6.71 -40.82 -0.27 -1.39 16 41 H 0.40 -0.38 9.06 45.56 0.41 0.04 16 42 H 0.14 0.14 7.90 -52.48 -0.41 -0.28 16 43 H 0.16 -0.31 7.24 -52.49 -0.38 -0.69 16 44 H 0.16 -0.04 8.06 -52.49 -0.42 -0.47 16 45 H 0.10 -0.30 7.96 -51.93 -0.41 -0.71 16 46 H 0.39 -1.51 8.74 45.56 0.40 -1.11 16 47 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 48 H -0.25 -0.86 7.11 56.52 0.40 -0.46 16 49 H 0.14 -0.48 6.96 -52.48 -0.37 -0.84 16 50 H 0.14 -0.59 6.38 -52.49 -0.33 -0.92 16 51 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 52 H 0.10 -0.09 5.70 -51.93 -0.30 -0.38 16 LS Contribution 418.83 15.07 6.31 6.31 Total: 0.00 -9.63 418.83 -11.42 -21.06 By element: Atomic # 1 Polarization: -6.60 SS G_CDS: -6.84 Total: -13.44 kcal Atomic # 6 Polarization: 2.73 SS G_CDS: -4.03 Total: -1.30 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -0.28 Total: -0.14 kcal Atomic # 8 Polarization: -5.44 SS G_CDS: -1.13 Total: -6.57 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -5.46 Total: -5.92 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -9.63 -11.42 -21.06 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_12807986.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.721 kcal (2) G-P(sol) polarization free energy of solvation -9.634 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.355 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.422 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.056 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.777 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds