Wall clock time and date at job start Tue Mar 9 2021 13:42:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.39285 * 121.03034 * 2 1 4 4 C 1.46501 * 134.20157 * 359.20242 * 3 2 1 5 5 C 1.50693 * 126.59626 * 0.80577 * 4 3 2 6 6 O 1.42897 * 109.47443 * 74.70935 * 5 4 3 7 7 Si 1.86298 * 109.46938 * 194.71225 * 5 4 3 8 8 C 1.34178 * 106.79921 * 180.54014 * 4 3 2 9 9 N 1.36949 * 109.95381 * 0.26646 * 8 4 3 10 10 C 1.37150 * 110.11492 * 359.97438 * 9 8 4 11 11 N 1.32819 * 132.96027 * 179.97438 * 10 9 8 12 12 C 1.31306 * 121.88796 * 180.02562 * 11 10 9 13 13 C 1.39751 * 121.02892 * 179.66390 * 2 1 3 14 14 C 1.47661 * 120.45755 * 0.04380 * 13 2 1 15 15 O 1.21577 * 119.99603 * 353.98335 * 14 13 2 16 16 N 1.34773 * 120.00306 * 173.97090 * 14 13 2 17 17 C 1.46505 * 119.99967 * 180.02562 * 16 14 13 18 18 H 1.09001 * 112.84741 * 23.81418 * 17 16 14 19 19 C 1.53780 * 113.61054 * 155.00513 * 17 16 14 20 20 C 1.53782 * 87.08161 * 89.11741 * 19 17 16 21 21 H 1.08999 * 113.61857 * 270.88427 * 20 19 17 22 22 C 1.53000 * 113.61695 * 139.97643 * 20 19 17 23 23 C 1.53001 * 109.47029 * 63.99404 * 22 20 19 24 24 C 1.52996 * 109.47243 * 183.99267 * 22 20 19 25 25 C 1.53006 * 109.47184 * 303.99472 * 22 20 19 26 26 C 1.53780 * 113.61368 * 252.50150 * 17 16 14 27 27 H 1.08998 * 109.47461 * 264.03195 * 1 2 3 28 28 H 1.08998 * 109.47351 * 24.03506 * 1 2 3 29 29 H 1.09003 * 109.46859 * 144.03100 * 1 2 3 30 30 H 1.09000 * 109.47502 * 314.70595 * 5 4 3 31 31 H 0.96703 * 113.99877 * 179.97438 * 6 5 4 32 32 H 1.48503 * 110.00256 * 178.68126 * 7 5 4 33 33 H 1.48501 * 110.00000 * 299.99707 * 7 5 4 34 34 H 1.08006 * 125.01820 * 180.23852 * 8 4 3 35 35 H 0.97001 * 124.94032 * 180.02562 * 9 8 4 36 36 H 1.08000 * 119.31399 * 179.97438 * 12 11 10 37 37 H 0.96999 * 120.00093 * 0.02562 * 16 14 13 38 38 H 1.09005 * 113.61255 * 203.66361 * 19 17 16 39 39 H 1.09004 * 113.62005 * 334.57200 * 19 17 16 40 40 H 1.08993 * 109.47499 * 59.99833 * 23 22 20 41 41 H 1.08996 * 109.47684 * 180.02562 * 23 22 20 42 42 H 1.09010 * 109.46975 * 299.99917 * 23 22 20 43 43 H 1.08993 * 109.47253 * 60.00172 * 24 22 20 44 44 H 1.09001 * 109.47162 * 180.02562 * 24 22 20 45 45 H 1.09005 * 109.47248 * 299.99844 * 24 22 20 46 46 H 1.09003 * 109.46669 * 53.37538 * 25 22 20 47 47 H 1.09000 * 109.46928 * 173.37508 * 25 22 20 48 48 H 1.08996 * 109.46997 * 293.37447 * 25 22 20 49 49 H 1.09001 * 113.61758 * 25.43862 * 26 17 16 50 50 H 1.09000 * 113.60959 * 156.33289 * 26 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8516 2.6101 -0.0146 5 6 0.4528 3.1705 -0.0183 6 8 -0.1194 3.0319 1.2837 7 14 0.5074 4.9735 -0.4839 8 6 2.9949 3.3124 -0.0181 9 7 4.0669 2.4603 -0.0129 10 6 3.6348 1.1587 -0.0052 11 7 4.2720 -0.0066 0.0014 12 6 3.6267 -1.1501 0.0077 13 6 2.2273 -1.1975 0.0070 14 6 1.5225 -2.4950 0.0137 15 8 0.3121 -2.5286 0.1234 16 7 2.2207 -3.6419 -0.1022 17 6 1.5212 -4.9292 -0.0962 18 1 0.4791 -4.8460 -0.4045 19 6 2.2889 -6.0507 -0.8157 20 6 2.9614 -6.3494 0.5346 21 1 3.8754 -5.7800 0.7027 22 6 3.1298 -7.8434 0.8183 23 6 4.0768 -8.4553 -0.2160 24 6 3.7134 -8.0338 2.2197 25 6 1.7676 -8.5352 0.7347 26 6 1.7200 -5.7322 1.2002 27 1 -0.3634 -0.1068 1.0221 28 1 -0.3634 0.9385 -0.4185 29 1 -0.3633 -0.8318 -0.6036 30 1 -0.1546 2.6267 -0.7419 31 1 -1.0215 3.3728 1.3553 32 1 -0.8688 5.5302 -0.5222 33 1 1.3325 5.7261 0.4949 34 1 3.0600 4.3905 -0.0246 35 1 4.9966 2.7370 -0.0138 36 1 4.1869 -2.0735 0.0125 37 1 3.1864 -3.6151 -0.1896 38 1 1.6494 -6.8578 -1.1730 39 1 2.9799 -5.6882 -1.5768 40 1 5.0472 -7.9625 -0.1565 41 1 4.1965 -9.5197 -0.0143 42 1 3.6610 -8.3196 -1.2145 43 1 3.0388 -7.5980 2.9565 44 1 3.8338 -9.0982 2.4216 45 1 4.6839 -7.5411 2.2792 46 1 1.2996 -8.3015 -0.2216 47 1 1.9019 -9.6135 0.8197 48 1 1.1310 -8.1832 1.5464 49 1 1.9516 -5.1126 2.0665 50 1 0.9249 -6.4522 1.3940 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_12890568.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:42:02 Heat of formation + Delta-G solvation = 27.736404 kcal Electronic energy + Delta-G solvation = -30484.051079 eV Core-core repulsion = 26479.144429 eV Total energy + Delta-G solvation = -4004.906650 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.189 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.79458 -41.56208 -40.18883 -38.58244 -37.82249 -36.56334 -34.96265 -33.80011 -31.99447 -30.82439 -28.80102 -28.51023 -28.25252 -26.61585 -26.26194 -25.89983 -24.52801 -23.83248 -21.94113 -21.14037 -20.37870 -19.31592 -18.93034 -18.64536 -18.49675 -17.57570 -17.06211 -16.67325 -16.41303 -16.29524 -15.90429 -15.61292 -15.52707 -15.22594 -15.08989 -14.98498 -14.66918 -14.31279 -14.08050 -13.93445 -13.83907 -13.64603 -13.52819 -13.45833 -13.18697 -13.15361 -12.92085 -12.73169 -12.71596 -12.60553 -12.45464 -12.04556 -11.98913 -11.88033 -11.35743 -11.12277 -11.07830 -10.98536 -10.86639 -10.35301 -10.19752 -9.96480 -9.53243 -9.08189 -5.01599 -0.18340 -0.00372 1.22453 1.39453 1.52212 1.66131 1.89887 1.96914 2.12729 2.88429 3.28925 3.37456 3.52733 3.54434 3.60124 3.69303 3.74797 3.77528 3.81646 3.90003 4.03894 4.11441 4.14742 4.24451 4.25621 4.33356 4.40342 4.52375 4.68269 4.69125 4.74202 4.74867 4.77707 4.81562 4.88285 4.92009 4.96636 4.99195 5.01530 5.08561 5.10690 5.12545 5.17301 5.23374 5.26155 5.36170 5.38357 5.45415 5.46686 5.55738 5.72165 5.81650 6.14797 6.48563 6.53732 6.89858 7.30193 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C 0.085 3.915 3 C -0.148 4.148 4 C -0.133 4.133 5 C -0.044 4.044 6 O -0.533 6.533 7 Si 0.681 3.319 8 C 0.072 3.928 9 N -0.569 5.569 10 C 0.308 3.692 11 N -0.503 5.503 12 C 0.180 3.820 13 C -0.234 4.234 14 C 0.575 3.425 15 O -0.529 6.529 16 N -0.710 5.710 17 C 0.121 3.879 18 H 0.103 0.897 19 C -0.144 4.144 20 C -0.099 4.099 21 H 0.087 0.913 22 C -0.059 4.059 23 C -0.141 4.141 24 C -0.141 4.141 25 C -0.148 4.148 26 C -0.151 4.151 27 H 0.085 0.915 28 H 0.066 0.934 29 H 0.097 0.903 30 H 0.078 0.922 31 H 0.378 0.622 32 H -0.258 1.258 33 H -0.253 1.253 34 H 0.184 0.816 35 H 0.426 0.574 36 H 0.161 0.839 37 H 0.399 0.601 38 H 0.099 0.901 39 H 0.072 0.928 40 H 0.053 0.947 41 H 0.054 0.946 42 H 0.055 0.945 43 H 0.055 0.945 44 H 0.054 0.946 45 H 0.053 0.947 46 H 0.059 0.941 47 H 0.054 0.946 48 H 0.059 0.941 49 H 0.069 0.931 50 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.031 0.991 -3.134 3.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.077 3.923 3 C -0.155 4.155 4 C -0.141 4.141 5 C -0.154 4.154 6 O -0.340 6.340 7 Si 0.581 3.419 8 C -0.055 4.055 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.216 5.216 12 C 0.011 3.989 13 C -0.241 4.241 14 C 0.363 3.637 15 O -0.407 6.407 16 N -0.362 5.362 17 C 0.016 3.984 18 H 0.121 0.879 19 C -0.182 4.182 20 C -0.118 4.118 21 H 0.106 0.894 22 C -0.059 4.059 23 C -0.198 4.198 24 C -0.199 4.199 25 C -0.205 4.205 26 C -0.190 4.190 27 H 0.104 0.896 28 H 0.085 0.915 29 H 0.116 0.884 30 H 0.096 0.904 31 H 0.226 0.774 32 H -0.182 1.182 33 H -0.177 1.177 34 H 0.201 0.799 35 H 0.265 0.735 36 H 0.178 0.822 37 H 0.234 0.766 38 H 0.117 0.883 39 H 0.091 0.909 40 H 0.073 0.927 41 H 0.073 0.927 42 H 0.075 0.925 43 H 0.074 0.926 44 H 0.073 0.927 45 H 0.072 0.928 46 H 0.078 0.922 47 H 0.073 0.927 48 H 0.078 0.922 49 H 0.088 0.912 50 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 2.578 1.695 -2.694 4.096 hybrid contribution -0.552 -0.178 0.869 1.045 sum 2.025 1.517 -1.825 3.120 Atomic orbital electron populations 1.21161 0.88938 1.03523 1.04212 1.19881 0.97070 0.89167 0.86224 1.19466 0.92867 0.93508 1.09659 1.19427 0.93128 0.90569 1.10934 1.24161 0.92097 1.11161 0.87981 1.86647 1.33646 1.84032 1.29668 0.95256 0.83410 0.74097 0.89125 1.21721 0.85006 0.95925 1.02819 1.41483 1.09571 1.02680 1.63746 1.18470 0.89268 0.85895 0.98848 1.66432 1.40533 0.95988 1.18654 1.22488 0.90079 0.94417 0.91884 1.20410 0.94758 0.93686 1.15269 1.17857 0.86817 0.83186 0.75853 1.90750 1.13569 1.87027 1.49308 1.45567 1.10440 1.05111 1.75069 1.21825 0.97672 0.81744 0.97175 0.87854 1.23463 0.99763 0.98002 0.96977 1.22650 0.97694 0.95352 0.96080 0.89428 1.20426 0.95739 0.94106 0.95649 1.21849 0.98926 1.00481 0.98585 1.21847 1.00650 1.01590 0.95770 1.22039 0.96261 1.00190 1.02015 1.23603 0.98658 0.99228 0.97488 0.89617 0.91484 0.88423 0.90434 0.77397 1.18241 1.17712 0.79919 0.73527 0.82162 0.76604 0.88277 0.90922 0.92747 0.92721 0.92541 0.92608 0.92705 0.92770 0.92236 0.92675 0.92225 0.91215 0.88460 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.36 8.69 36.00 0.31 -0.05 16 2 C 0.09 0.31 5.98 -103.67 -0.62 -0.31 16 3 C -0.15 -0.50 6.16 -105.12 -0.65 -1.15 16 4 C -0.13 -0.19 5.61 -102.73 -0.58 -0.76 16 5 C -0.04 0.01 2.05 36.00 0.07 0.08 16 6 O -0.53 -0.62 12.86 -35.23 -0.45 -1.07 16 7 Si 0.68 -1.30 30.80 -169.99 -5.24 -6.54 16 8 C 0.07 -0.04 10.44 -16.70 -0.17 -0.22 16 9 N -0.57 0.01 6.04 -12.12 -0.07 -0.07 16 10 C 0.31 0.91 8.42 -155.72 -1.31 -0.40 16 11 N -0.50 -1.56 10.37 -11.96 -0.12 -1.68 16 12 C 0.18 0.27 10.67 -17.11 -0.18 0.08 16 13 C -0.23 -0.63 5.89 -104.82 -0.62 -1.25 16 14 C 0.57 1.64 7.72 -12.41 -0.10 1.55 16 15 O -0.53 -3.02 13.09 5.30 0.07 -2.95 16 16 N -0.71 0.03 5.21 -54.02 -0.28 -0.25 16 17 C 0.12 -0.02 4.32 -67.12 -0.29 -0.31 16 18 H 0.10 0.16 7.46 -51.93 -0.39 -0.23 16 19 C -0.14 0.25 6.42 -25.92 -0.17 0.09 16 20 C -0.10 0.16 2.91 -89.81 -0.26 -0.10 16 21 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 22 C -0.06 0.08 0.68 -154.51 -0.10 -0.03 16 23 C -0.14 0.18 8.32 37.16 0.31 0.49 16 24 C -0.14 0.11 8.43 37.16 0.31 0.43 16 25 C -0.15 0.18 7.49 37.16 0.28 0.46 16 26 C -0.15 0.08 7.07 -25.92 -0.18 -0.10 16 27 H 0.09 0.32 8.14 -51.93 -0.42 -0.10 16 28 H 0.07 0.10 5.05 -51.93 -0.26 -0.16 16 29 H 0.10 0.38 5.95 -51.93 -0.31 0.07 16 30 H 0.08 -0.09 6.05 -51.93 -0.31 -0.41 16 31 H 0.38 -1.05 8.74 45.56 0.40 -0.65 16 32 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 33 H -0.25 -0.10 7.04 56.52 0.40 0.29 16 34 H 0.18 -0.68 6.31 -52.48 -0.33 -1.01 16 35 H 0.43 -1.17 8.96 -40.82 -0.37 -1.54 16 36 H 0.16 -0.33 6.43 -52.49 -0.34 -0.67 16 37 H 0.40 -0.95 6.78 -40.82 -0.28 -1.23 16 38 H 0.10 -0.19 6.07 -51.93 -0.32 -0.51 16 39 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 41 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 42 H 0.06 -0.08 7.57 -51.92 -0.39 -0.47 16 43 H 0.05 -0.03 8.09 -51.93 -0.42 -0.45 16 44 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 45 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 46 H 0.06 -0.09 6.03 -51.93 -0.31 -0.40 16 47 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 48 H 0.06 -0.06 6.46 -51.93 -0.34 -0.40 16 49 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 50 H 0.10 -0.07 5.70 -51.93 -0.30 -0.36 16 LS Contribution 384.73 15.07 5.80 5.80 Total: 0.00 -8.56 384.73 -11.51 -20.06 By element: Atomic # 1 Polarization: -4.55 SS G_CDS: -7.27 Total: -11.81 kcal Atomic # 6 Polarization: 2.45 SS G_CDS: -3.94 Total: -1.49 kcal Atomic # 7 Polarization: -1.52 SS G_CDS: -0.48 Total: -2.00 kcal Atomic # 8 Polarization: -3.64 SS G_CDS: -0.38 Total: -4.02 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.24 Total: -6.54 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -8.56 -11.51 -20.06 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_12890568.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.800 kcal (2) G-P(sol) polarization free energy of solvation -8.555 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.245 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.509 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.064 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.736 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds