Wall clock time and date at job start Tue Mar 9 2021 13:42:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38975 * 119.95580 * 2 1 4 4 O 1.35711 * 119.91396 * 0.02562 * 3 2 1 5 5 C 1.39017 * 120.17834 * 179.97438 * 3 2 1 6 6 C 1.50696 * 119.96114 * 180.02562 * 5 3 2 7 7 O 1.42898 * 109.47328 * 75.02088 * 6 5 3 8 8 Si 1.86294 * 109.47306 * 195.02506 * 6 5 3 9 9 C 1.37689 * 120.08414 * 0.04659 * 5 3 2 10 10 C 1.39751 * 119.91025 * 359.97438 * 9 5 3 11 11 C 1.47605 * 120.08322 * 180.02562 * 10 9 5 12 12 O 1.21591 * 120.00414 * 359.97438 * 11 10 9 13 13 N 1.34771 * 119.99841 * 179.97438 * 11 10 9 14 14 C 1.46501 * 120.00348 * 179.97438 * 13 11 10 15 15 H 1.09003 * 112.90743 * 336.25344 * 14 13 11 16 16 C 1.53781 * 113.61355 * 107.49791 * 14 13 11 17 17 C 1.53782 * 87.07998 * 89.12141 * 16 14 13 18 18 H 1.09000 * 113.68951 * 270.87412 * 17 16 14 19 19 C 1.52999 * 113.61609 * 139.97923 * 17 16 14 20 20 C 1.53004 * 109.47131 * 317.50906 * 19 17 16 21 21 C 1.53000 * 109.47177 * 77.50801 * 19 17 16 22 22 C 1.53000 * 109.47099 * 197.51045 * 19 17 16 23 23 C 1.53776 * 87.08239 * 25.43296 * 17 16 14 24 24 C 1.37720 * 119.95576 * 180.32617 * 2 1 3 25 25 H 1.09001 * 109.47085 * 89.99962 * 1 2 3 26 26 H 1.08998 * 109.47253 * 209.99826 * 1 2 3 27 27 H 1.09007 * 109.46932 * 330.00117 * 1 2 3 28 28 H 0.96696 * 114.00220 * 269.97629 * 4 3 2 29 29 H 1.09012 * 109.46767 * 315.02417 * 6 5 3 30 30 H 0.96702 * 113.99502 * 60.00123 * 7 6 5 31 31 H 1.48504 * 110.00109 * 179.97438 * 8 6 5 32 32 H 1.48494 * 110.00131 * 301.31451 * 8 6 5 33 33 H 1.08006 * 120.04064 * 179.97438 * 9 5 3 34 34 H 0.97001 * 120.00574 * 359.97438 * 13 11 10 35 35 H 1.09006 * 113.61646 * 203.66443 * 16 14 13 36 36 H 1.08996 * 113.61829 * 334.57635 * 16 14 13 37 37 H 1.09002 * 109.47037 * 66.29925 * 20 19 17 38 38 H 1.08999 * 109.46731 * 186.29779 * 20 19 17 39 39 H 1.08998 * 109.46823 * 306.29744 * 20 19 17 40 40 H 1.09006 * 109.46864 * 59.99888 * 21 19 17 41 41 H 1.09001 * 109.47376 * 179.97438 * 21 19 17 42 42 H 1.08995 * 109.47069 * 300.00196 * 21 19 17 43 43 H 1.08996 * 109.47176 * 60.00025 * 22 19 17 44 44 H 1.09001 * 109.47038 * 180.02562 * 22 19 17 45 45 H 1.08996 * 109.47377 * 299.99454 * 22 19 17 46 46 H 1.08997 * 113.62087 * 220.02450 * 23 17 16 47 47 H 1.09000 * 113.69337 * 89.12574 * 23 17 16 48 48 H 1.08002 * 120.04959 * 359.97438 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 0.0005 5 6 3.5911 1.2095 0.0005 6 6 4.3386 2.5180 0.0011 7 8 4.2721 3.1041 1.3027 8 14 6.1198 2.2159 -0.4536 9 6 4.2859 0.0208 0.0001 10 6 3.5918 -1.1921 -0.0003 11 6 4.3328 -2.4687 -0.0002 12 8 5.5487 -2.4660 -0.0002 13 7 3.6616 -3.6374 -0.0001 14 6 4.3970 -4.9045 -0.0006 15 1 5.4047 -4.8101 -0.4053 16 6 4.3403 -5.6501 1.3432 17 6 3.0630 -6.3300 0.8224 18 1 2.1503 -5.7781 1.0472 19 6 2.9657 -7.8127 1.1868 20 6 4.3289 -8.4778 0.9860 21 6 2.5411 -7.9515 2.6501 22 6 1.9298 -8.4918 0.2886 23 6 3.6015 -6.0783 -0.5958 24 6 2.1947 -1.1932 -0.0068 25 1 -0.3633 0.0000 -1.0277 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3633 0.8901 0.5138 28 1 1.3223 2.7184 -0.8827 29 1 3.8878 3.1943 -0.7254 30 1 4.6558 2.5559 2.0009 31 1 6.8677 3.4988 -0.4572 32 1 6.7369 1.2705 0.5110 33 1 5.3660 0.0258 0.0001 34 1 2.6916 -3.6397 0.0002 35 1 5.1708 -6.3396 1.4954 36 1 4.1692 -4.9964 2.1984 37 1 5.0409 -8.0711 1.7043 38 1 4.2343 -9.5531 1.1373 39 1 4.6826 -8.2829 -0.0264 40 1 1.5699 -7.4777 2.7931 41 1 2.4713 -9.0079 2.9096 42 1 3.2791 -7.4678 3.2900 43 1 2.2323 -8.3929 -0.7539 44 1 1.8602 -9.5480 0.5485 45 1 0.9586 -8.0181 0.4316 46 1 2.8343 -5.7701 -1.3060 47 1 4.2301 -6.8840 -0.9750 48 1 1.6548 -2.1286 -0.0117 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_13287732.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:42:27 Heat of formation + Delta-G solvation = -68.434850 kcal Electronic energy + Delta-G solvation = -27546.093492 eV Core-core repulsion = 23761.176074 eV Total energy + Delta-G solvation = -3784.917418 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.91001 -41.24445 -39.85305 -37.92114 -37.52240 -36.56953 -34.17145 -33.79004 -31.58856 -28.56248 -28.31049 -28.11703 -27.00084 -26.35589 -26.21207 -24.53159 -22.18391 -21.60748 -21.20477 -19.65482 -19.14461 -18.80475 -18.08999 -17.24725 -16.95137 -16.64773 -16.38734 -16.03698 -15.97268 -15.75592 -15.71716 -15.18316 -15.09391 -14.77218 -14.54431 -14.31891 -14.08369 -13.91327 -13.90173 -13.56340 -13.33052 -13.27301 -13.05467 -12.93307 -12.78859 -12.72315 -12.50793 -12.39619 -12.11524 -11.94323 -11.74611 -11.65787 -11.43043 -11.19349 -10.96266 -10.92856 -10.55709 -10.12032 -10.01672 -9.67913 -4.94779 -0.40088 0.03629 1.25345 1.62751 1.65295 1.97331 2.00892 2.56722 3.02503 3.29725 3.43587 3.47034 3.49575 3.53175 3.65699 3.68067 3.80824 3.92321 3.97812 4.14294 4.17978 4.19447 4.25710 4.42591 4.46044 4.50998 4.58205 4.61798 4.62596 4.67919 4.69268 4.71963 4.79285 4.86631 4.91209 4.94730 4.96887 5.03644 5.04273 5.06383 5.07372 5.11417 5.17677 5.24340 5.30881 5.39024 5.39995 5.49927 5.62571 6.41179 6.41684 6.54017 7.15827 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.117 4.117 3 C 0.161 3.839 4 O -0.484 6.484 5 C -0.149 4.149 6 C -0.061 4.061 7 O -0.521 6.521 8 Si 0.680 3.320 9 C -0.053 4.053 10 C -0.138 4.138 11 C 0.563 3.437 12 O -0.531 6.531 13 N -0.708 5.708 14 C 0.118 3.882 15 H 0.104 0.896 16 C -0.151 4.151 17 C -0.099 4.099 18 H 0.087 0.913 19 C -0.059 4.059 20 C -0.149 4.149 21 C -0.141 4.141 22 C -0.141 4.141 23 C -0.144 4.144 24 C -0.066 4.066 25 H 0.074 0.926 26 H 0.070 0.930 27 H 0.077 0.923 28 H 0.394 0.606 29 H 0.117 0.883 30 H 0.375 0.625 31 H -0.253 1.253 32 H -0.255 1.255 33 H 0.145 0.855 34 H 0.400 0.600 35 H 0.098 0.902 36 H 0.069 0.931 37 H 0.059 0.941 38 H 0.055 0.945 39 H 0.059 0.941 40 H 0.053 0.947 41 H 0.054 0.946 42 H 0.055 0.945 43 H 0.056 0.944 44 H 0.054 0.946 45 H 0.053 0.947 46 H 0.072 0.928 47 H 0.100 0.900 48 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.234 -3.095 -3.377 6.237 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.118 4.118 3 C 0.115 3.885 4 O -0.295 6.295 5 C -0.149 4.149 6 C -0.171 4.171 7 O -0.327 6.327 8 Si 0.581 3.419 9 C -0.072 4.072 10 C -0.141 4.141 11 C 0.351 3.649 12 O -0.408 6.408 13 N -0.359 5.359 14 C 0.013 3.987 15 H 0.122 0.878 16 C -0.190 4.190 17 C -0.117 4.117 18 H 0.105 0.895 19 C -0.059 4.059 20 C -0.206 4.206 21 C -0.199 4.199 22 C -0.198 4.198 23 C -0.181 4.181 24 C -0.084 4.084 25 H 0.092 0.908 26 H 0.089 0.911 27 H 0.096 0.904 28 H 0.252 0.748 29 H 0.135 0.865 30 H 0.222 0.778 31 H -0.178 1.178 32 H -0.180 1.180 33 H 0.163 0.837 34 H 0.235 0.765 35 H 0.116 0.884 36 H 0.088 0.912 37 H 0.078 0.922 38 H 0.074 0.926 39 H 0.078 0.922 40 H 0.072 0.928 41 H 0.074 0.926 42 H 0.074 0.926 43 H 0.075 0.925 44 H 0.073 0.927 45 H 0.072 0.928 46 H 0.091 0.909 47 H 0.119 0.881 48 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -2.774 -2.607 -2.856 4.759 hybrid contribution -0.904 -0.080 0.756 1.181 sum -3.678 -2.688 -2.100 5.016 Atomic orbital electron populations 1.20739 0.89717 1.03828 1.02841 1.20207 0.97301 0.92082 1.02196 1.18306 0.88778 0.85266 0.96106 1.84782 1.75614 1.35659 1.33403 1.20597 0.93824 0.95899 1.04628 1.24831 1.10131 0.93500 0.88676 1.86651 1.82682 1.47228 1.16106 0.94990 0.74462 0.81151 0.91294 1.21156 1.00882 0.90211 0.94912 1.19799 0.93436 0.93377 1.07505 1.18142 0.87245 0.83530 0.76004 1.90814 1.13301 1.87453 1.49223 1.45572 1.10046 1.05017 1.75301 1.21867 0.97116 0.82158 0.97543 0.87763 1.23602 0.98733 0.99224 0.97401 1.22643 0.97822 0.95381 0.95885 0.89502 1.20428 0.95797 0.94057 0.95643 1.22045 0.96212 1.00371 1.01937 1.21849 1.01151 1.01708 0.95171 1.21848 0.98333 1.00268 0.99401 1.23463 1.00092 0.97670 0.96921 1.21097 0.92594 0.97800 0.96954 0.90774 0.91105 0.90384 0.74805 0.86538 0.77767 1.17783 1.17978 0.83727 0.76461 0.88365 0.91240 0.92218 0.92607 0.92206 0.92788 0.92641 0.92602 0.92526 0.92658 0.92775 0.90937 0.88144 0.85115 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.26 9.78 36.01 0.35 0.62 16 2 C -0.12 0.07 5.89 -104.54 -0.62 -0.54 16 3 C 0.16 0.06 6.66 -39.02 -0.26 -0.20 16 4 O -0.48 0.07 11.84 -18.84 -0.22 -0.15 16 5 C -0.15 -0.09 5.27 -104.54 -0.55 -0.64 16 6 C -0.06 -0.02 2.37 36.00 0.09 0.06 16 7 O -0.52 -1.23 12.88 -35.23 -0.45 -1.69 16 8 Si 0.68 0.14 30.24 -169.99 -5.14 -5.00 16 9 C -0.05 -0.07 8.20 -39.22 -0.32 -0.39 16 10 C -0.14 -0.14 5.87 -104.96 -0.62 -0.75 16 11 C 0.56 1.29 7.76 -12.44 -0.10 1.19 16 12 O -0.53 -3.19 15.94 5.29 0.08 -3.10 16 13 N -0.71 0.38 5.21 -54.03 -0.28 0.10 16 14 C 0.12 -0.05 4.32 -67.12 -0.29 -0.34 16 15 H 0.10 0.14 7.47 -51.93 -0.39 -0.25 16 16 C -0.15 0.13 7.04 -25.92 -0.18 -0.05 16 17 C -0.10 0.21 2.91 -89.81 -0.26 -0.06 16 18 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 19 C -0.06 0.10 0.68 -154.51 -0.10 0.00 16 20 C -0.15 0.23 7.53 37.16 0.28 0.51 16 21 C -0.14 0.17 8.42 37.16 0.31 0.48 16 22 C -0.14 0.24 8.33 37.16 0.31 0.55 16 23 C -0.14 0.32 6.46 -25.92 -0.17 0.15 16 24 C -0.07 0.07 9.18 -39.22 -0.36 -0.29 16 25 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 26 H 0.07 -0.22 8.09 -51.93 -0.42 -0.64 16 27 H 0.08 -0.11 7.52 -51.93 -0.39 -0.50 16 28 H 0.39 -1.85 9.06 45.56 0.41 -1.43 16 29 H 0.12 -0.11 7.82 -51.92 -0.41 -0.52 16 30 H 0.37 -0.06 8.70 45.56 0.40 0.33 16 31 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 32 H -0.26 -0.71 6.68 56.52 0.38 -0.33 16 33 H 0.15 0.28 4.43 -52.48 -0.23 0.04 16 34 H 0.40 -1.20 6.72 -40.82 -0.27 -1.48 16 35 H 0.10 -0.10 5.72 -51.93 -0.30 -0.39 16 36 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 37 H 0.06 -0.08 6.43 -51.93 -0.33 -0.42 16 38 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 39 H 0.06 -0.11 6.00 -51.93 -0.31 -0.42 16 40 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 41 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 42 H 0.05 -0.05 8.05 -51.93 -0.42 -0.46 16 43 H 0.06 -0.10 7.61 -51.93 -0.39 -0.50 16 44 H 0.05 -0.07 8.14 -51.93 -0.42 -0.50 16 45 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 46 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 47 H 0.10 -0.24 6.02 -51.93 -0.31 -0.55 16 48 H 0.13 -0.49 6.39 -52.49 -0.34 -0.83 16 LS Contribution 375.89 15.07 5.66 5.66 Total: 0.00 -7.82 375.89 -9.57 -17.39 By element: Atomic # 1 Polarization: -6.77 SS G_CDS: -6.73 Total: -13.50 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: -2.49 Total: 0.29 kcal Atomic # 7 Polarization: 0.38 SS G_CDS: -0.28 Total: 0.10 kcal Atomic # 8 Polarization: -4.35 SS G_CDS: -0.59 Total: -4.94 kcal Atomic # 14 Polarization: 0.14 SS G_CDS: -5.14 Total: -5.00 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -7.82 -9.57 -17.39 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_13287732.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.047 kcal (2) G-P(sol) polarization free energy of solvation -7.819 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.866 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.388 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.435 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds