Wall clock time and date at job start Tue Mar 9 2021 13:42:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35999 * 116.99974 * 2 1 4 4 C 1.38558 * 120.06597 * 0.29826 * 3 2 1 5 5 C 1.38273 * 120.01681 * 180.24506 * 4 3 2 6 6 C 1.50697 * 119.92124 * 179.72379 * 5 4 3 7 7 O 1.42897 * 109.47303 * 299.73104 * 6 5 4 8 8 Si 1.86303 * 109.46919 * 179.72909 * 6 5 4 9 9 C 1.38210 * 120.15381 * 359.45696 * 5 4 3 10 10 C 1.38374 * 120.13575 * 0.27180 * 9 5 4 11 11 Cl 1.73604 * 120.01266 * 180.02562 * 10 9 5 12 12 C 1.38627 * 119.97825 * 359.97438 * 10 9 5 13 13 O 1.36018 * 120.07676 * 180.02562 * 12 10 9 14 14 C 1.42903 * 116.99753 * 90.00774 * 13 12 10 15 15 C 1.53005 * 109.47015 * 90.00132 * 14 13 12 16 16 C 1.50696 * 109.47010 * 209.99537 * 14 13 12 17 17 O 1.21285 * 120.00138 * 0.02562 * 16 14 13 18 18 N 1.34771 * 120.00104 * 179.97438 * 16 14 13 19 19 C 1.46502 * 120.00256 * 180.02562 * 18 16 14 20 20 H 1.08992 * 112.85010 * 336.20177 * 19 18 16 21 21 C 1.53782 * 113.61319 * 107.50719 * 19 18 16 22 22 C 1.53777 * 87.08219 * 89.11626 * 21 19 18 23 23 H 1.08993 * 113.61584 * 270.87851 * 22 21 19 24 24 C 1.53005 * 113.69046 * 139.99104 * 22 21 19 25 25 C 1.52997 * 109.46974 * 317.54552 * 24 22 21 26 26 C 1.53007 * 109.47064 * 77.54340 * 24 22 21 27 27 C 1.52996 * 109.47320 * 197.54180 * 24 22 21 28 28 C 1.53776 * 87.08062 * 25.43370 * 22 21 19 29 29 H 1.08993 * 109.47234 * 179.97438 * 1 2 3 30 30 H 1.08998 * 109.47058 * 300.00429 * 1 2 3 31 31 H 1.09008 * 109.46935 * 59.99970 * 1 2 3 32 32 H 1.07995 * 119.98758 * 359.97280 * 4 3 2 33 33 H 1.08999 * 109.47123 * 59.73318 * 6 5 4 34 34 H 0.96700 * 113.99967 * 299.99598 * 7 6 5 35 35 H 1.48496 * 110.00028 * 58.68394 * 8 6 5 36 36 H 1.48505 * 109.99666 * 180.02562 * 8 6 5 37 37 H 1.08004 * 119.93475 * 180.25310 * 9 5 4 38 38 H 1.08997 * 109.46832 * 329.99976 * 14 13 12 39 39 H 1.08993 * 109.47351 * 59.99462 * 15 14 13 40 40 H 1.09001 * 109.46852 * 180.02562 * 15 14 13 41 41 H 1.09002 * 109.46908 * 299.99603 * 15 14 13 42 42 H 0.97006 * 120.00257 * 0.02562 * 18 16 14 43 43 H 1.09001 * 113.61226 * 203.66903 * 21 19 18 44 44 H 1.08996 * 113.61612 * 334.56562 * 21 19 18 45 45 H 1.09001 * 109.47326 * 66.28718 * 25 24 22 46 46 H 1.09003 * 109.47124 * 186.28953 * 25 24 22 47 47 H 1.08999 * 109.47315 * 306.28471 * 25 24 22 48 48 H 1.08996 * 109.46810 * 59.99843 * 26 24 22 49 49 H 1.08996 * 109.47017 * 180.02562 * 26 24 22 50 50 H 1.09004 * 109.46984 * 300.00057 * 26 24 22 51 51 H 1.09012 * 109.46789 * 60.00109 * 27 24 22 52 52 H 1.08996 * 109.46996 * 179.97438 * 27 24 22 53 53 H 1.08996 * 109.47181 * 300.00542 * 27 24 22 54 54 H 1.09003 * 113.61432 * 220.01954 * 28 22 21 55 55 H 1.09006 * 113.61602 * 89.11632 * 28 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 1.2931 2.3747 0.0062 5 6 1.9219 3.6062 0.0011 6 6 1.1005 4.8696 0.0016 7 8 0.2761 4.9022 -1.1651 8 14 2.2346 6.3476 0.0023 9 6 3.3020 3.6811 0.0011 10 6 4.0605 2.5238 0.0005 11 17 5.7938 2.6216 0.0012 12 6 3.4359 1.2862 0.0005 13 8 4.1796 0.1473 0.0005 14 6 4.5341 -0.3960 1.2738 15 6 3.4528 -1.3786 1.7280 16 6 5.8530 -1.1166 1.1628 17 8 6.4325 -1.1602 0.0983 18 7 6.3890 -1.7117 2.2467 19 6 7.6714 -2.4117 2.1390 20 1 7.8893 -2.7421 1.1234 21 6 8.8378 -1.6675 2.8102 22 6 8.4737 -2.4218 4.0999 23 1 7.7390 -1.9037 4.7161 24 6 9.6895 -2.8970 4.8981 25 6 10.7360 -3.4702 3.9405 26 6 10.2907 -1.7162 5.6631 27 6 9.2575 -3.9798 5.8890 28 6 7.8652 -3.5091 3.1987 29 1 -0.3633 -1.0276 -0.0005 30 1 -0.3633 0.5139 0.8899 31 1 -0.3633 0.5139 -0.8901 32 1 0.2146 2.3191 0.0107 33 1 0.4717 4.8938 0.8916 34 1 0.7699 4.8834 -1.9963 35 1 3.1192 6.3095 -1.1898 36 1 1.4366 7.6000 0.0034 37 1 3.7894 4.6448 0.0012 38 1 4.6209 0.4108 2.0015 39 1 3.3660 -2.1853 1.0001 40 1 3.7231 -1.7926 2.6994 41 1 2.4989 -0.8574 1.8082 42 1 5.9257 -1.6765 3.0982 43 1 9.8152 -1.9352 2.4088 44 1 8.6874 -0.5900 2.8773 45 1 11.1253 -2.6725 3.3079 46 1 11.5518 -3.9096 4.5146 47 1 10.2765 -4.2371 3.3168 48 1 9.5451 -1.3078 6.3453 49 1 11.1570 -2.0546 6.2314 50 1 10.5984 -0.9448 4.9571 51 1 8.8292 -4.8211 5.3440 52 1 10.1236 -4.3186 6.4573 53 1 8.5119 -3.5714 6.5712 54 1 6.9294 -3.9185 3.5794 55 1 8.5768 -4.2804 2.9036 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664192_13428712.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:42:51 Heat of formation + Delta-G solvation = -91.742676 kcal Electronic energy + Delta-G solvation = -36531.815677 eV Core-core repulsion = 31756.330333 eV Total energy + Delta-G solvation = -4775.485344 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.174 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -42.03882 -41.55353 -40.32530 -39.25819 -38.97309 -37.82196 -36.98439 -36.49772 -34.26752 -32.64296 -31.38466 -31.30762 -28.54449 -28.42661 -28.18906 -26.77906 -26.35379 -26.20572 -25.03150 -23.62387 -22.86373 -21.82393 -21.19502 -19.73504 -19.06250 -18.74784 -18.55939 -18.35324 -17.56329 -17.25857 -16.85579 -16.49466 -16.31413 -16.20916 -16.13123 -16.03553 -15.80512 -15.67730 -15.36504 -15.17828 -14.77840 -14.66359 -14.30469 -14.23220 -13.98832 -13.79070 -13.67263 -13.46873 -13.38789 -13.22685 -13.15952 -12.92731 -12.75645 -12.70317 -12.66860 -12.63771 -12.45191 -12.37734 -12.16027 -11.99829 -11.89655 -11.83060 -11.80725 -11.37331 -11.28266 -11.08410 -10.86554 -10.75874 -10.70717 -10.08451 -9.86984 -9.42102 -4.95472 -0.35091 -0.03081 0.85322 1.23371 1.45808 1.58560 1.63609 1.92648 2.16734 2.20813 2.68576 3.27892 3.45793 3.53431 3.57046 3.58539 3.72922 3.78017 3.80395 3.84368 3.87248 3.97750 4.02246 4.04703 4.10250 4.29081 4.31527 4.31572 4.36487 4.50886 4.57656 4.59580 4.69237 4.70888 4.74291 4.75870 4.76707 4.80492 4.83749 4.85276 4.86745 4.99077 5.01782 5.05676 5.07304 5.15911 5.16862 5.18266 5.23343 5.24201 5.27213 5.43332 5.48072 5.53648 5.70209 5.92118 6.32047 6.41050 6.48350 7.14906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.312 6.312 3 C 0.127 3.873 4 C -0.163 4.163 5 C -0.061 4.061 6 C -0.072 4.072 7 O -0.541 6.541 8 Si 0.751 3.249 9 C -0.135 4.135 10 C -0.024 4.024 11 Cl -0.050 7.050 12 C 0.053 3.947 13 O -0.309 6.309 14 C 0.074 3.926 15 C -0.161 4.161 16 C 0.518 3.482 17 O -0.562 6.562 18 N -0.693 5.693 19 C 0.113 3.887 20 H 0.076 0.924 21 C -0.150 4.150 22 C -0.088 4.088 23 H 0.098 0.902 24 C -0.057 4.057 25 C -0.150 4.150 26 C -0.141 4.141 27 C -0.139 4.139 28 C -0.131 4.131 29 H 0.118 0.882 30 H 0.076 0.924 31 H 0.063 0.937 32 H 0.162 0.838 33 H 0.144 0.856 34 H 0.388 0.612 35 H -0.286 1.286 36 H -0.294 1.294 37 H 0.155 0.845 38 H 0.104 0.896 39 H 0.057 0.943 40 H 0.100 0.900 41 H 0.082 0.918 42 H 0.416 0.584 43 H 0.095 0.905 44 H 0.059 0.941 45 H 0.054 0.946 46 H 0.052 0.948 47 H 0.062 0.938 48 H 0.057 0.943 49 H 0.052 0.948 50 H 0.049 0.951 51 H 0.058 0.942 52 H 0.050 0.950 53 H 0.057 0.943 54 H 0.085 0.915 55 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.976 -0.551 8.504 9.404 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.225 6.225 3 C 0.080 3.920 4 C -0.181 4.181 5 C -0.062 4.062 6 C -0.181 4.181 7 O -0.349 6.349 8 Si 0.656 3.344 9 C -0.153 4.153 10 C -0.051 4.051 11 Cl -0.021 7.021 12 C 0.008 3.992 13 O -0.225 6.225 14 C 0.016 3.984 15 C -0.218 4.218 16 C 0.304 3.696 17 O -0.439 6.439 18 N -0.347 5.347 19 C 0.007 3.993 20 H 0.094 0.906 21 C -0.188 4.188 22 C -0.106 4.106 23 H 0.116 0.884 24 C -0.057 4.057 25 C -0.207 4.207 26 C -0.198 4.198 27 C -0.197 4.197 28 C -0.169 4.169 29 H 0.136 0.864 30 H 0.094 0.906 31 H 0.081 0.919 32 H 0.180 0.820 33 H 0.161 0.839 34 H 0.237 0.763 35 H -0.213 1.213 36 H -0.222 1.222 37 H 0.172 0.828 38 H 0.122 0.878 39 H 0.077 0.923 40 H 0.118 0.882 41 H 0.101 0.899 42 H 0.254 0.746 43 H 0.113 0.887 44 H 0.078 0.922 45 H 0.073 0.927 46 H 0.071 0.929 47 H 0.081 0.919 48 H 0.076 0.924 49 H 0.071 0.929 50 H 0.069 0.931 51 H 0.077 0.923 52 H 0.069 0.931 53 H 0.076 0.924 54 H 0.103 0.897 55 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -3.480 -0.162 7.611 8.370 hybrid contribution -0.261 -0.077 -1.039 1.074 sum -3.741 -0.239 6.572 7.566 Atomic orbital electron populations 1.23458 0.76016 1.05898 1.02710 1.86217 1.23463 1.25132 1.87716 1.19215 0.90396 0.86193 0.96191 1.21308 1.01705 0.90007 1.05107 1.20134 0.92511 0.96029 0.97508 1.25127 1.00469 1.00440 0.92079 1.86586 1.36190 1.95612 1.16530 0.94141 0.78015 0.74017 0.88221 1.20889 0.93159 0.97155 1.04126 1.21096 0.85914 0.93702 1.04412 1.98417 1.08644 1.98464 1.96605 1.17802 0.87389 0.85371 1.08660 1.86250 1.69925 1.38153 1.28175 1.22328 0.92752 0.97531 0.85823 1.22252 0.98210 0.98879 1.02462 1.20601 0.86299 0.78740 0.83979 1.90735 1.63354 1.60171 1.29682 1.45433 1.22464 1.54803 1.12006 1.21860 0.83269 0.94355 0.99770 0.90576 1.23569 0.98744 0.99506 0.97004 1.22585 0.97160 0.96510 0.94337 0.88400 1.20409 0.94592 0.95510 0.95226 1.22050 0.98486 1.00894 0.99222 1.21844 1.00658 0.97509 0.99817 1.21830 1.01177 0.98115 0.98546 1.23407 1.02221 0.96388 0.94902 0.86384 0.90595 0.91856 0.82038 0.83850 0.76259 1.21309 1.22184 0.82761 0.87795 0.92345 0.88189 0.89943 0.74645 0.88713 0.92223 0.92665 0.92862 0.91937 0.92396 0.92925 0.93142 0.92259 0.93053 0.92359 0.89679 0.88029 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.31 -0.49 8.19 -79.67 -0.65 -1.15 16 3 C 0.13 0.33 6.54 22.56 0.15 0.48 16 4 C -0.16 0.24 8.60 22.35 0.19 0.43 16 5 C -0.06 0.12 5.39 -19.86 -0.11 0.02 16 6 C -0.07 0.30 2.82 71.24 0.20 0.50 16 7 O -0.54 0.62 12.77 -148.98 -1.90 -1.28 16 8 Si 0.75 -2.49 29.78 68.60 2.04 -0.45 16 9 C -0.13 -0.03 8.45 22.30 0.19 0.16 16 10 C -0.02 -0.12 6.33 22.39 0.14 0.02 16 11 Cl -0.05 -0.37 28.50 -2.72 -0.08 -0.45 16 12 C 0.05 0.34 5.56 22.58 0.13 0.47 16 13 O -0.31 -3.15 8.48 -67.34 -0.57 -3.72 16 14 C 0.07 0.26 3.20 29.85 0.10 0.36 16 15 C -0.16 0.26 9.00 71.98 0.65 0.91 16 16 C 0.52 3.78 7.23 87.66 0.63 4.41 16 17 O -0.56 -10.02 16.10 15.99 0.26 -9.76 16 18 N -0.69 0.10 5.16 -440.05 -2.27 -2.17 16 19 C 0.11 0.10 4.32 45.52 0.20 0.30 16 20 H 0.08 0.51 7.46 -2.39 -0.02 0.49 16 21 C -0.15 0.06 7.04 31.12 0.22 0.28 16 22 C -0.09 0.38 2.90 -10.27 -0.03 0.35 16 23 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 24 C -0.06 0.20 0.68 -52.18 -0.04 0.16 16 25 C -0.15 0.36 7.53 71.98 0.54 0.90 16 26 C -0.14 0.34 8.42 71.98 0.61 0.95 16 27 C -0.14 0.55 8.33 71.98 0.60 1.15 16 28 C -0.13 0.55 6.46 31.12 0.20 0.75 16 29 H 0.12 -1.02 8.14 -2.39 -0.02 -1.04 16 30 H 0.08 -0.71 7.65 -2.39 -0.02 -0.72 16 31 H 0.06 -0.41 7.68 -2.38 -0.02 -0.43 16 32 H 0.16 -0.83 6.30 -2.91 -0.02 -0.85 16 33 H 0.14 -1.09 7.96 -2.39 -0.02 -1.11 16 34 H 0.39 -2.17 8.70 -74.06 -0.64 -2.81 16 35 H -0.29 -0.55 7.11 99.48 0.71 0.16 16 36 H -0.29 -1.14 7.11 99.48 0.71 -0.43 16 37 H 0.16 -0.44 4.87 -2.91 -0.01 -0.45 16 38 H 0.10 -0.04 7.91 -2.39 -0.02 -0.06 16 39 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 40 H 0.10 -0.79 7.57 -2.39 -0.02 -0.81 16 41 H 0.08 -0.16 6.28 -2.39 -0.01 -0.17 16 42 H 0.42 -2.88 8.12 -92.70 -0.75 -3.63 16 43 H 0.09 0.01 5.73 -2.39 -0.01 0.00 16 44 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 45 H 0.05 -0.08 6.44 -2.39 -0.02 -0.10 16 46 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 47 H 0.06 -0.19 6.00 -2.39 -0.01 -0.20 16 48 H 0.06 -0.18 8.14 -2.39 -0.02 -0.20 16 49 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 50 H 0.05 -0.06 8.06 -2.38 -0.02 -0.08 16 51 H 0.06 -0.25 7.60 -2.38 -0.02 -0.27 16 52 H 0.05 -0.15 8.14 -2.39 -0.02 -0.17 16 53 H 0.06 -0.26 8.14 -2.39 -0.02 -0.28 16 54 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 55 H 0.10 -0.42 6.02 -2.38 -0.01 -0.44 16 Total: 0.00 -22.21 443.55 2.08 -20.13 By element: Atomic # 1 Polarization: -14.35 SS G_CDS: -0.43 Total: -14.79 kcal Atomic # 6 Polarization: 7.94 SS G_CDS: 5.68 Total: 13.62 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -2.27 Total: -2.17 kcal Atomic # 8 Polarization: -13.04 SS G_CDS: -2.87 Total: -15.91 kcal Atomic # 14 Polarization: -2.49 SS G_CDS: 2.04 Total: -0.45 kcal Atomic # 17 Polarization: -0.37 SS G_CDS: -0.08 Total: -0.45 kcal Total: -22.21 2.08 -20.13 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_13428712.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.610 kcal (2) G-P(sol) polarization free energy of solvation -22.209 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.819 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.077 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.133 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.743 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds