Wall clock time and date at job start Tue Mar 9 2021 13:43:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.52998 * 109.47210 * 2 1 4 4 C 1.53003 * 109.46967 * 240.00025 * 2 1 3 5 5 C 1.53008 * 109.47126 * 120.00001 * 2 1 3 6 6 H 1.08996 * 112.84721 * 186.30737 * 5 2 1 7 7 C 1.54051 * 113.69328 * 317.57587 * 5 2 1 8 8 C 1.53779 * 86.98177 * 139.99090 * 7 5 2 9 9 H 1.09005 * 113.61311 * 219.98434 * 8 7 5 10 10 N 1.46495 * 113.61715 * 89.16291 * 8 7 5 11 11 C 1.34777 * 120.00386 * 105.85916 * 10 8 7 12 12 O 1.21280 * 119.99881 * 0.02562 * 11 10 8 13 13 C 1.50695 * 120.00195 * 179.97438 * 11 10 8 14 14 O 1.42903 * 109.46960 * 180.02562 * 13 11 10 15 15 C 1.35903 * 116.99612 * 180.02562 * 14 13 11 16 16 C 1.38713 * 120.05335 * 180.02562 * 15 14 13 17 17 C 1.50704 * 120.02772 * 359.97438 * 16 15 14 18 18 O 1.42898 * 109.47209 * 285.00646 * 17 16 15 19 19 Si 1.86301 * 109.47139 * 165.00475 * 17 16 15 20 20 C 1.38165 * 119.94478 * 180.27641 * 16 15 14 21 21 C 1.38249 * 120.05502 * 359.48608 * 20 16 15 22 22 C 1.38289 * 120.10953 * 0.50988 * 21 20 16 23 23 C 1.38125 * 120.05747 * 359.74650 * 22 21 20 24 24 C 1.53775 * 113.61337 * 55.11280 * 5 2 1 25 25 H 1.09004 * 109.47036 * 306.28874 * 1 2 3 26 26 H 1.09000 * 109.47426 * 66.28488 * 1 2 3 27 27 H 1.09001 * 109.47344 * 186.29126 * 1 2 3 28 28 H 1.09004 * 109.47364 * 180.02562 * 3 2 1 29 29 H 1.08999 * 109.47142 * 300.00125 * 3 2 1 30 30 H 1.09003 * 109.47189 * 60.00080 * 3 2 1 31 31 H 1.09000 * 109.47097 * 299.99844 * 4 2 1 32 32 H 1.08999 * 109.47108 * 60.00045 * 4 2 1 33 33 H 1.08998 * 109.46620 * 180.02562 * 4 2 1 34 34 H 1.09000 * 113.61279 * 25.48582 * 7 5 2 35 35 H 1.08999 * 113.69263 * 254.50328 * 7 5 2 36 36 H 0.96998 * 119.99860 * 285.86390 * 10 8 7 37 37 H 1.09000 * 109.46839 * 60.00522 * 13 11 10 38 38 H 1.08994 * 109.47315 * 300.00199 * 13 11 10 39 39 H 1.09001 * 109.46806 * 45.00617 * 17 16 15 40 40 H 0.96701 * 113.99741 * 299.99755 * 18 17 16 41 41 H 1.48494 * 109.99882 * 58.68019 * 19 17 16 42 42 H 1.48500 * 109.99979 * 180.02562 * 19 17 16 43 43 H 1.07998 * 119.97054 * 179.74454 * 20 16 15 44 44 H 1.07996 * 119.94651 * 180.25762 * 21 20 16 45 45 H 1.07995 * 119.97189 * 179.76766 * 22 21 20 46 46 H 1.08000 * 120.03174 * 180.02562 * 23 22 21 47 47 H 1.08995 * 113.61894 * 105.38561 * 24 5 2 48 48 H 1.09002 * 113.61537 * 334.47759 * 24 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7213 -1.2493 5 6 2.0400 -0.7213 1.2493 6 1 3.1223 -0.6588 1.3618 7 6 1.2646 -0.3625 2.5312 8 6 1.3654 -1.8493 2.9110 9 1 0.4569 -2.2469 3.3635 10 7 2.5722 -2.1799 3.6728 11 6 2.4875 -2.4295 4.9946 12 8 1.4121 -2.3809 5.5532 13 6 3.7288 -2.7702 5.7781 14 8 3.3825 -2.9908 7.1469 15 6 4.3948 -3.3098 7.9957 16 6 4.1300 -3.5378 9.3381 17 6 2.7192 -3.4314 9.8571 18 8 2.3491 -2.0545 9.9522 19 14 2.6163 -4.2200 11.5419 20 6 5.1617 -3.8563 10.2001 21 6 6.4555 -3.9583 9.7237 22 6 6.7221 -3.7315 8.3858 23 6 5.6950 -3.4076 7.5210 24 6 1.4855 -2.1469 1.4070 25 1 -0.3633 0.6083 0.8284 26 1 -0.3634 0.4133 -0.9409 27 1 -0.3634 -1.0215 0.1126 28 1 3.1300 1.4425 -0.0005 29 1 1.6766 1.9563 -0.8900 30 1 1.6767 1.9563 0.8900 31 1 1.6766 -1.7489 -1.2493 32 1 1.6766 -0.2074 -2.1392 33 1 3.1299 -0.7216 -1.2490 34 1 0.2442 -0.0276 2.3449 35 1 1.8119 0.2980 3.2037 36 1 3.4322 -2.2191 3.2260 37 1 4.4385 -1.9457 5.7109 38 1 4.1809 -3.6732 5.3680 39 1 2.0413 -3.9435 9.1742 40 1 2.9109 -1.5363 10.5447 41 1 3.5593 -3.5514 12.4740 42 1 1.2297 -4.1223 12.0646 43 1 4.9566 -4.0298 11.2461 44 1 7.2600 -4.2114 10.3983 45 1 7.7342 -3.8081 8.0168 46 1 5.9036 -3.2310 6.4762 47 1 2.2108 -2.9260 1.1726 48 1 0.5253 -2.2990 0.9140 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_2989392.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:43:15 Heat of formation + Delta-G solvation = -54.139508 kcal Electronic energy + Delta-G solvation = -27084.611193 eV Core-core repulsion = 23300.313667 eV Total energy + Delta-G solvation = -3784.297526 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.78148 -41.31008 -39.96173 -38.42022 -37.45982 -36.53072 -33.83882 -32.72557 -31.27268 -29.43821 -28.56322 -28.29961 -26.61313 -26.35258 -25.89216 -23.66444 -22.61402 -21.82659 -21.23448 -19.54142 -19.10533 -18.33542 -17.96896 -17.48123 -17.04766 -16.90684 -16.53024 -16.40216 -15.97508 -15.72798 -15.54857 -15.43357 -15.03962 -14.99163 -14.87740 -14.34219 -14.11708 -13.91465 -13.69461 -13.58738 -13.47011 -13.22855 -13.03635 -12.83135 -12.79127 -12.51061 -12.48805 -12.16960 -12.12122 -11.94767 -11.82602 -11.55046 -11.43002 -11.20262 -10.95064 -10.84147 -10.38704 -10.09625 -10.00852 -9.21482 -4.88280 0.20405 0.40130 1.38730 1.45164 1.51538 1.64110 2.05076 2.55938 2.67117 3.41147 3.46350 3.48384 3.55204 3.66329 3.72136 3.77327 3.78934 3.86292 3.92343 3.97931 4.02131 4.17208 4.19205 4.25660 4.33332 4.45346 4.51163 4.61709 4.67260 4.68679 4.71257 4.71731 4.78326 4.86333 4.90685 4.94556 4.98014 5.03727 5.04897 5.10752 5.15894 5.25065 5.30574 5.31233 5.38067 5.39817 5.47410 5.59754 5.68811 6.24935 6.40330 6.61001 7.13453 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.059 4.059 3 C -0.141 4.141 4 C -0.141 4.141 5 C -0.099 4.099 6 H 0.087 0.913 7 C -0.151 4.151 8 C 0.121 3.879 9 H 0.103 0.897 10 N -0.711 5.711 11 C 0.517 3.483 12 O -0.506 6.506 13 C 0.040 3.960 14 O -0.277 6.277 15 C 0.152 3.848 16 C -0.146 4.146 17 C -0.065 4.065 18 O -0.520 6.520 19 Si 0.689 3.311 20 C -0.083 4.083 21 C -0.151 4.151 22 C -0.072 4.072 23 C -0.212 4.212 24 C -0.143 4.143 25 H 0.059 0.941 26 H 0.055 0.945 27 H 0.059 0.941 28 H 0.053 0.947 29 H 0.054 0.946 30 H 0.055 0.945 31 H 0.055 0.945 32 H 0.054 0.946 33 H 0.053 0.947 34 H 0.098 0.902 35 H 0.069 0.931 36 H 0.401 0.599 37 H 0.093 0.907 38 H 0.094 0.906 39 H 0.118 0.882 40 H 0.370 0.630 41 H -0.260 1.260 42 H -0.257 1.257 43 H 0.135 0.865 44 H 0.129 0.871 45 H 0.128 0.872 46 H 0.129 0.871 47 H 0.072 0.928 48 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.534 -1.902 -3.701 6.924 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.059 4.059 3 C -0.199 4.199 4 C -0.198 4.198 5 C -0.117 4.117 6 H 0.106 0.894 7 C -0.189 4.189 8 C 0.016 3.984 9 H 0.121 0.879 10 N -0.364 5.364 11 C 0.302 3.698 12 O -0.379 6.379 13 C -0.039 4.039 14 O -0.189 6.189 15 C 0.106 3.894 16 C -0.147 4.147 17 C -0.175 4.175 18 O -0.325 6.325 19 Si 0.591 3.409 20 C -0.101 4.101 21 C -0.169 4.169 22 C -0.091 4.091 23 C -0.231 4.231 24 C -0.181 4.181 25 H 0.078 0.922 26 H 0.074 0.926 27 H 0.078 0.922 28 H 0.072 0.928 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.075 0.925 32 H 0.074 0.926 33 H 0.072 0.928 34 H 0.116 0.884 35 H 0.088 0.912 36 H 0.236 0.764 37 H 0.111 0.889 38 H 0.112 0.888 39 H 0.136 0.864 40 H 0.216 0.784 41 H -0.186 1.186 42 H -0.182 1.182 43 H 0.152 0.848 44 H 0.147 0.853 45 H 0.146 0.854 46 H 0.147 0.853 47 H 0.091 0.909 48 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 3.866 -1.926 -2.803 5.149 hybrid contribution 1.123 1.241 -0.537 1.757 sum 4.988 -0.685 -3.340 6.042 Atomic orbital electron populations 1.22044 0.94573 1.02046 1.01916 1.20429 0.95632 0.95366 0.94516 1.21848 1.00848 0.95323 1.01848 1.21849 1.00898 1.00297 0.96796 1.22697 0.99451 0.95232 0.94329 0.89444 1.23643 1.02027 0.96392 0.96868 1.21847 0.88569 0.96394 0.91619 0.87928 1.45482 1.11000 1.71989 1.07949 1.20013 0.90212 0.77340 0.82261 1.90803 1.29215 1.48967 1.68930 1.22460 0.96322 1.02985 0.82167 1.86240 1.32022 1.83731 1.16907 1.18800 0.86594 0.94383 0.89621 1.19643 0.97014 1.06828 0.91175 1.24907 0.93849 0.87342 1.11402 1.86708 1.58089 1.19297 1.68437 0.95116 0.80615 0.90375 0.74825 1.21051 0.92353 0.97413 0.99295 1.21064 0.96642 1.03342 0.95895 1.21025 0.98798 0.95955 0.93273 1.21294 0.92174 1.08660 1.00966 1.23454 1.02871 0.97275 0.94454 0.92209 0.92594 0.92223 0.92788 0.92641 0.92593 0.92543 0.92645 0.92771 0.88371 0.91204 0.76424 0.88921 0.88811 0.86422 0.78371 1.18560 1.18194 0.84764 0.85324 0.85376 0.85296 0.90889 0.88132 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.21 7.53 37.16 0.28 0.49 16 2 C -0.06 0.10 0.68 -154.51 -0.10 -0.01 16 3 C -0.14 0.16 8.42 37.16 0.31 0.48 16 4 C -0.14 0.23 8.33 37.16 0.31 0.54 16 5 C -0.10 0.21 2.92 -89.66 -0.26 -0.06 16 6 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 7 C -0.15 0.11 7.06 -25.78 -0.18 -0.07 16 8 C 0.12 -0.05 4.29 -67.12 -0.29 -0.33 16 9 H 0.10 0.18 7.50 -51.93 -0.39 -0.21 16 10 N -0.71 0.77 5.26 -53.02 -0.28 0.49 16 11 C 0.52 1.09 7.91 -10.99 -0.09 1.01 16 12 O -0.51 -3.73 16.12 -14.35 -0.23 -3.96 16 13 C 0.04 -0.01 5.22 36.00 0.19 0.18 16 14 O -0.28 -1.01 9.00 -39.35 -0.35 -1.36 16 15 C 0.15 0.35 6.66 -39.21 -0.26 0.09 16 16 C -0.15 -0.29 5.27 -104.47 -0.55 -0.84 16 17 C -0.07 -0.17 2.38 36.01 0.09 -0.08 16 18 O -0.52 -2.25 12.88 -35.23 -0.45 -2.71 16 19 Si 0.69 0.33 30.26 -169.99 -5.14 -4.82 16 20 C -0.08 -0.03 8.66 -39.60 -0.34 -0.37 16 21 C -0.15 0.06 10.04 -39.56 -0.40 -0.33 16 22 C -0.07 0.04 10.04 -39.60 -0.40 -0.35 16 23 C -0.21 -0.01 9.04 -39.43 -0.36 -0.36 16 24 C -0.14 0.31 6.45 -25.92 -0.17 0.15 16 25 H 0.06 -0.07 6.44 -51.93 -0.33 -0.40 16 26 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.06 -0.10 6.00 -51.93 -0.31 -0.41 16 28 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.05 -0.04 8.06 -51.93 -0.42 -0.46 16 31 H 0.06 -0.10 7.60 -51.93 -0.39 -0.49 16 32 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 34 H 0.10 -0.07 5.74 -51.93 -0.30 -0.36 16 35 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 36 H 0.40 -1.67 8.70 -40.82 -0.36 -2.02 16 37 H 0.09 -0.24 7.66 -51.93 -0.40 -0.63 16 38 H 0.09 -0.28 7.66 -51.93 -0.40 -0.68 16 39 H 0.12 0.41 7.83 -51.93 -0.41 0.00 16 40 H 0.37 0.30 8.70 45.56 0.40 0.70 16 41 H -0.26 -0.38 6.67 56.52 0.38 -0.01 16 42 H -0.26 -1.00 7.11 56.52 0.40 -0.60 16 43 H 0.13 -0.14 4.87 -52.49 -0.26 -0.40 16 44 H 0.13 -0.30 8.06 -52.49 -0.42 -0.72 16 45 H 0.13 -0.35 8.06 -52.49 -0.42 -0.78 16 46 H 0.13 -0.32 6.30 -52.49 -0.33 -0.65 16 47 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 48 H 0.10 -0.22 6.02 -51.93 -0.31 -0.54 16 LS Contribution 378.54 15.07 5.70 5.70 Total: 0.00 -8.68 378.54 -10.63 -19.31 By element: Atomic # 1 Polarization: -5.12 SS G_CDS: -7.66 Total: -12.78 kcal Atomic # 6 Polarization: 2.34 SS G_CDS: -2.22 Total: 0.12 kcal Atomic # 7 Polarization: 0.77 SS G_CDS: -0.28 Total: 0.49 kcal Atomic # 8 Polarization: -6.99 SS G_CDS: -1.04 Total: -8.03 kcal Atomic # 14 Polarization: 0.33 SS G_CDS: -5.14 Total: -4.82 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -8.68 -10.63 -19.31 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_2989392.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.827 kcal (2) G-P(sol) polarization free energy of solvation -8.678 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.505 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.635 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.312 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.140 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds