Wall clock time and date at job start Tue Mar 9 2021 13:43:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.52998 * 109.47210 * 2 1 4 4 C 1.53003 * 109.46967 * 240.00025 * 2 1 3 5 5 C 1.53008 * 109.47126 * 120.00001 * 2 1 3 6 6 H 1.08996 * 112.84721 * 186.30737 * 5 2 1 7 7 C 1.54051 * 113.69328 * 317.57587 * 5 2 1 8 8 C 1.53779 * 86.98177 * 139.99090 * 7 5 2 9 9 H 1.09005 * 113.61311 * 219.98434 * 8 7 5 10 10 N 1.46495 * 113.61715 * 89.16291 * 8 7 5 11 11 C 1.34777 * 120.00386 * 105.85916 * 10 8 7 12 12 O 1.21280 * 119.99881 * 0.02562 * 11 10 8 13 13 C 1.50695 * 120.00195 * 179.97438 * 11 10 8 14 14 O 1.42903 * 109.46960 * 180.02562 * 13 11 10 15 15 C 1.35903 * 116.99612 * 180.02562 * 14 13 11 16 16 C 1.38713 * 120.05335 * 180.02562 * 15 14 13 17 17 C 1.50704 * 120.02772 * 359.97438 * 16 15 14 18 18 O 1.42898 * 109.47209 * 285.00646 * 17 16 15 19 19 Si 1.86301 * 109.47139 * 165.00475 * 17 16 15 20 20 C 1.38165 * 119.94478 * 180.27641 * 16 15 14 21 21 C 1.38249 * 120.05502 * 359.48608 * 20 16 15 22 22 C 1.38289 * 120.10953 * 0.50988 * 21 20 16 23 23 C 1.38125 * 120.05747 * 359.74650 * 22 21 20 24 24 C 1.53775 * 113.61337 * 55.11280 * 5 2 1 25 25 H 1.09004 * 109.47036 * 306.28874 * 1 2 3 26 26 H 1.09000 * 109.47426 * 66.28488 * 1 2 3 27 27 H 1.09001 * 109.47344 * 186.29126 * 1 2 3 28 28 H 1.09004 * 109.47364 * 180.02562 * 3 2 1 29 29 H 1.08999 * 109.47142 * 300.00125 * 3 2 1 30 30 H 1.09003 * 109.47189 * 60.00080 * 3 2 1 31 31 H 1.09000 * 109.47097 * 299.99844 * 4 2 1 32 32 H 1.08999 * 109.47108 * 60.00045 * 4 2 1 33 33 H 1.08998 * 109.46620 * 180.02562 * 4 2 1 34 34 H 1.09000 * 113.61279 * 25.48582 * 7 5 2 35 35 H 1.08999 * 113.69263 * 254.50328 * 7 5 2 36 36 H 0.96998 * 119.99860 * 285.86390 * 10 8 7 37 37 H 1.09000 * 109.46839 * 60.00522 * 13 11 10 38 38 H 1.08994 * 109.47315 * 300.00199 * 13 11 10 39 39 H 1.09001 * 109.46806 * 45.00617 * 17 16 15 40 40 H 0.96701 * 113.99741 * 299.99755 * 18 17 16 41 41 H 1.48494 * 109.99882 * 58.68019 * 19 17 16 42 42 H 1.48500 * 109.99979 * 180.02562 * 19 17 16 43 43 H 1.07998 * 119.97054 * 179.74454 * 20 16 15 44 44 H 1.07996 * 119.94651 * 180.25762 * 21 20 16 45 45 H 1.07995 * 119.97189 * 179.76766 * 22 21 20 46 46 H 1.08000 * 120.03174 * 180.02562 * 23 22 21 47 47 H 1.08995 * 113.61894 * 105.38561 * 24 5 2 48 48 H 1.09002 * 113.61537 * 334.47759 * 24 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7213 -1.2493 5 6 2.0400 -0.7213 1.2493 6 1 3.1223 -0.6588 1.3618 7 6 1.2646 -0.3625 2.5312 8 6 1.3654 -1.8493 2.9110 9 1 0.4569 -2.2469 3.3635 10 7 2.5722 -2.1799 3.6728 11 6 2.4875 -2.4295 4.9946 12 8 1.4121 -2.3809 5.5532 13 6 3.7288 -2.7702 5.7781 14 8 3.3825 -2.9908 7.1469 15 6 4.3948 -3.3098 7.9957 16 6 4.1300 -3.5378 9.3381 17 6 2.7192 -3.4314 9.8571 18 8 2.3491 -2.0545 9.9522 19 14 2.6163 -4.2200 11.5419 20 6 5.1617 -3.8563 10.2001 21 6 6.4555 -3.9583 9.7237 22 6 6.7221 -3.7315 8.3858 23 6 5.6950 -3.4076 7.5210 24 6 1.4855 -2.1469 1.4070 25 1 -0.3633 0.6083 0.8284 26 1 -0.3634 0.4133 -0.9409 27 1 -0.3634 -1.0215 0.1126 28 1 3.1300 1.4425 -0.0005 29 1 1.6766 1.9563 -0.8900 30 1 1.6767 1.9563 0.8900 31 1 1.6766 -1.7489 -1.2493 32 1 1.6766 -0.2074 -2.1392 33 1 3.1299 -0.7216 -1.2490 34 1 0.2442 -0.0276 2.3449 35 1 1.8119 0.2980 3.2037 36 1 3.4322 -2.2191 3.2260 37 1 4.4385 -1.9457 5.7109 38 1 4.1809 -3.6732 5.3680 39 1 2.0413 -3.9435 9.1742 40 1 2.9109 -1.5363 10.5447 41 1 3.5593 -3.5514 12.4740 42 1 1.2297 -4.1223 12.0646 43 1 4.9566 -4.0298 11.2461 44 1 7.2600 -4.2114 10.3983 45 1 7.7342 -3.8081 8.0168 46 1 5.9036 -3.2310 6.4762 47 1 2.2108 -2.9260 1.1726 48 1 0.5253 -2.2990 0.9140 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664192_2989392.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:43:14 Heat of formation + Delta-G solvation = -52.010481 kcal Electronic energy + Delta-G solvation = -27084.518872 eV Core-core repulsion = 23300.313667 eV Total energy + Delta-G solvation = -3784.205204 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.81534 -41.29560 -40.04995 -38.51434 -37.61879 -36.54679 -33.90642 -32.74298 -31.24004 -29.43973 -28.45299 -28.20872 -26.70235 -26.27374 -25.83769 -23.65342 -22.63900 -21.87168 -21.22664 -19.57511 -19.04235 -18.38780 -18.10924 -17.51635 -17.09339 -16.90939 -16.55719 -16.36677 -16.07487 -15.72559 -15.57100 -15.45759 -15.06244 -15.02631 -14.92517 -14.29624 -14.19431 -13.82200 -13.75556 -13.60761 -13.43650 -13.18489 -13.05641 -12.78216 -12.71646 -12.53042 -12.40643 -12.13756 -12.03607 -11.88645 -11.86401 -11.68941 -11.34018 -11.12459 -11.03421 -10.88956 -10.54236 -10.15485 -9.97647 -9.21884 -4.96005 0.23618 0.42028 1.28153 1.38259 1.45459 1.53624 1.92882 2.57157 2.70187 3.44390 3.47224 3.51368 3.55051 3.71255 3.75754 3.82981 3.88437 3.95889 4.03900 4.07664 4.12893 4.25930 4.28365 4.31729 4.37333 4.53577 4.54504 4.66792 4.71301 4.73147 4.77415 4.82447 4.82635 4.95492 4.98221 4.98931 5.02568 5.12901 5.14095 5.21126 5.23593 5.28617 5.37829 5.40325 5.44215 5.50994 5.53337 5.66348 5.76425 6.26711 6.44083 6.51954 7.08933 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.058 4.058 3 C -0.141 4.141 4 C -0.140 4.140 5 C -0.087 4.087 6 H 0.099 0.901 7 C -0.152 4.152 8 C 0.112 3.888 9 H 0.075 0.925 10 N -0.691 5.691 11 C 0.513 3.487 12 O -0.571 6.571 13 C 0.039 3.961 14 O -0.313 6.313 15 C 0.128 3.872 16 C -0.164 4.164 17 C -0.084 4.084 18 O -0.549 6.549 19 Si 0.784 3.216 20 C -0.088 4.088 21 C -0.154 4.154 22 C -0.074 4.074 23 C -0.212 4.212 24 C -0.130 4.130 25 H 0.054 0.946 26 H 0.053 0.947 27 H 0.062 0.938 28 H 0.057 0.943 29 H 0.052 0.948 30 H 0.049 0.951 31 H 0.059 0.941 32 H 0.050 0.950 33 H 0.058 0.942 34 H 0.094 0.906 35 H 0.058 0.942 36 H 0.420 0.580 37 H 0.120 0.880 38 H 0.126 0.874 39 H 0.095 0.905 40 H 0.381 0.619 41 H -0.264 1.264 42 H -0.308 1.308 43 H 0.146 0.854 44 H 0.151 0.849 45 H 0.154 0.846 46 H 0.154 0.846 47 H 0.087 0.913 48 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.381 -2.565 -4.448 9.829 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.058 4.058 3 C -0.199 4.199 4 C -0.197 4.197 5 C -0.106 4.106 6 H 0.117 0.883 7 C -0.190 4.190 8 C 0.007 3.993 9 H 0.093 0.907 10 N -0.345 5.345 11 C 0.299 3.701 12 O -0.449 6.449 13 C -0.039 4.039 14 O -0.226 6.226 15 C 0.083 3.917 16 C -0.165 4.165 17 C -0.191 4.191 18 O -0.357 6.357 19 Si 0.688 3.312 20 C -0.106 4.106 21 C -0.172 4.172 22 C -0.092 4.092 23 C -0.230 4.230 24 C -0.168 4.168 25 H 0.073 0.927 26 H 0.072 0.928 27 H 0.081 0.919 28 H 0.076 0.924 29 H 0.071 0.929 30 H 0.068 0.932 31 H 0.078 0.922 32 H 0.069 0.931 33 H 0.077 0.923 34 H 0.112 0.888 35 H 0.077 0.923 36 H 0.258 0.742 37 H 0.137 0.863 38 H 0.144 0.856 39 H 0.113 0.887 40 H 0.230 0.770 41 H -0.190 1.190 42 H -0.237 1.237 43 H 0.164 0.836 44 H 0.168 0.832 45 H 0.172 0.828 46 H 0.172 0.828 47 H 0.106 0.894 48 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 6.782 -2.581 -3.616 8.107 hybrid contribution 0.213 1.488 -0.366 1.547 sum 6.995 -1.093 -3.981 8.122 Atomic orbital electron populations 1.22056 0.94954 1.02149 1.01557 1.20412 0.95331 0.95205 0.94828 1.21849 1.01083 0.95530 1.01415 1.21832 1.01154 1.00352 0.96341 1.22643 0.99820 0.94938 0.93168 0.88253 1.23626 1.02040 0.95742 0.97596 1.21866 0.88003 0.96792 0.92674 0.90722 1.45340 1.11732 1.70354 1.07053 1.20583 0.90220 0.76274 0.82979 1.90774 1.31661 1.52159 1.70338 1.22680 0.95248 1.05379 0.80628 1.86192 1.33597 1.84289 1.18559 1.19085 0.87345 0.95563 0.89732 1.19713 0.96783 1.08196 0.91844 1.25235 0.94270 0.86570 1.13071 1.86653 1.59039 1.20681 1.69343 0.94029 0.76867 0.88714 0.71599 1.21196 0.92436 0.97325 0.99616 1.21408 0.96735 1.02437 0.96594 1.21402 0.99812 0.94869 0.93133 1.21593 0.91180 1.07803 1.02445 1.23391 1.03363 0.97623 0.92378 0.92744 0.92832 0.91880 0.92369 0.92914 0.93216 0.92181 0.93051 0.92316 0.88798 0.92297 0.74205 0.86284 0.85642 0.88675 0.77027 1.18975 1.23682 0.83622 0.83158 0.82823 0.82805 0.89439 0.88024 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.36 7.53 71.98 0.54 0.91 16 2 C -0.06 0.21 0.68 -52.18 -0.04 0.17 16 3 C -0.14 0.34 8.42 71.98 0.61 0.95 16 4 C -0.14 0.59 8.33 71.98 0.60 1.19 16 5 C -0.09 0.41 2.92 -10.17 -0.03 0.38 16 6 H 0.10 -0.66 8.14 -2.39 -0.02 -0.68 16 7 C -0.15 0.07 7.06 31.21 0.22 0.29 16 8 C 0.11 0.04 4.29 45.52 0.20 0.23 16 9 H 0.07 0.48 7.50 -2.38 -0.02 0.46 16 10 N -0.69 1.32 5.26 -440.05 -2.32 -1.00 16 11 C 0.51 2.87 7.91 87.66 0.69 3.56 16 12 O -0.57 -10.32 16.12 16.01 0.26 -10.07 16 13 C 0.04 -0.02 5.22 71.23 0.37 0.35 16 14 O -0.31 -2.79 9.00 -73.42 -0.66 -3.45 16 15 C 0.13 0.66 6.66 22.51 0.15 0.81 16 16 C -0.16 -0.80 5.27 -19.77 -0.10 -0.91 16 17 C -0.08 -0.62 2.38 71.24 0.17 -0.45 16 18 O -0.55 -6.27 12.88 -148.98 -1.92 -8.19 16 19 Si 0.78 1.49 30.26 68.60 2.08 3.57 16 20 C -0.09 -0.01 8.66 22.25 0.19 0.18 16 21 C -0.15 0.40 10.04 22.28 0.22 0.62 16 22 C -0.07 0.25 10.04 22.25 0.22 0.48 16 23 C -0.21 0.29 9.04 22.37 0.20 0.49 16 24 C -0.13 0.63 6.45 31.12 0.20 0.83 16 25 H 0.05 -0.07 6.44 -2.38 -0.02 -0.08 16 26 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 27 H 0.06 -0.20 6.00 -2.39 -0.01 -0.21 16 28 H 0.06 -0.18 8.14 -2.38 -0.02 -0.20 16 29 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 30 H 0.05 -0.05 8.06 -2.39 -0.02 -0.07 16 31 H 0.06 -0.28 7.60 -2.39 -0.02 -0.30 16 32 H 0.05 -0.16 8.14 -2.39 -0.02 -0.17 16 33 H 0.06 -0.28 8.14 -2.39 -0.02 -0.30 16 34 H 0.09 0.03 5.74 -2.39 -0.01 0.02 16 35 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 36 H 0.42 -4.03 8.70 -92.71 -0.81 -4.84 16 37 H 0.12 -0.75 7.66 -2.39 -0.02 -0.77 16 38 H 0.13 -0.94 7.66 -2.39 -0.02 -0.96 16 39 H 0.10 1.03 7.83 -2.39 -0.02 1.01 16 40 H 0.38 1.45 8.70 -74.06 -0.64 0.81 16 41 H -0.26 -0.62 6.67 99.48 0.66 0.05 16 42 H -0.31 -3.15 7.11 99.48 0.71 -2.44 16 43 H 0.15 -0.45 4.87 -2.91 -0.01 -0.46 16 44 H 0.15 -1.10 8.06 -2.91 -0.02 -1.12 16 45 H 0.15 -1.35 8.06 -2.91 -0.02 -1.38 16 46 H 0.15 -1.16 6.30 -2.91 -0.02 -1.17 16 47 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 48 H 0.10 -0.47 6.02 -2.39 -0.01 -0.48 16 Total: 0.00 -24.54 378.54 1.38 -23.16 By element: Atomic # 1 Polarization: -13.61 SS G_CDS: -0.48 Total: -14.10 kcal Atomic # 6 Polarization: 5.65 SS G_CDS: 4.42 Total: 10.07 kcal Atomic # 7 Polarization: 1.32 SS G_CDS: -2.32 Total: -1.00 kcal Atomic # 8 Polarization: -19.38 SS G_CDS: -2.32 Total: -21.70 kcal Atomic # 14 Polarization: 1.49 SS G_CDS: 2.08 Total: 3.57 kcal Total: -24.54 1.38 -23.16 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_2989392.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.851 kcal (2) G-P(sol) polarization free energy of solvation -24.536 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.387 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.376 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.159 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.010 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds