Wall clock time and date at job start Tue Mar 9 2021 13:44:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52998 * 109.47122 * 2 1 4 4 C 1.52998 * 109.46955 * 240.00187 * 2 1 3 5 5 C 1.53003 * 109.47157 * 120.00529 * 2 1 3 6 6 H 1.09001 * 112.84209 * 292.51933 * 5 2 1 7 7 C 1.53777 * 113.61601 * 63.71513 * 5 2 1 8 8 C 1.53778 * 87.08250 * 139.98224 * 7 5 2 9 9 H 1.08995 * 113.61690 * 219.93465 * 8 7 5 10 10 N 1.46497 * 113.61346 * 89.11137 * 8 7 5 11 11 C 1.34787 * 119.99789 * 155.00152 * 10 8 7 12 12 O 1.21692 * 119.99907 * 0.02562 * 11 10 8 13 13 C 1.46681 * 119.99901 * 180.02562 * 11 10 8 14 14 C 1.37872 * 126.22995 * 179.97438 * 13 11 10 15 15 C 1.39837 * 107.08315 * 180.02562 * 14 13 11 16 16 C 1.35453 * 107.86650 * 359.97438 * 15 14 13 17 17 C 1.50696 * 125.56574 * 179.73444 * 16 15 14 18 18 O 1.42900 * 109.47397 * 245.02717 * 17 16 15 19 19 Si 1.86294 * 109.47033 * 5.02842 * 17 16 15 20 20 N 1.35539 * 108.87308 * 0.02562 * 16 15 14 21 21 C 1.53782 * 113.61502 * 161.21640 * 5 2 1 22 22 H 1.08999 * 109.46778 * 299.99561 * 1 2 3 23 23 H 1.08998 * 109.47346 * 59.99463 * 1 2 3 24 24 H 1.08999 * 109.47008 * 179.97438 * 1 2 3 25 25 H 1.09005 * 109.46901 * 180.02562 * 3 2 1 26 26 H 1.08993 * 109.47401 * 300.00000 * 3 2 1 27 27 H 1.08999 * 109.46936 * 60.00535 * 3 2 1 28 28 H 1.09000 * 109.47218 * 293.49536 * 4 2 1 29 29 H 1.09000 * 109.47427 * 53.49011 * 4 2 1 30 30 H 1.09001 * 109.47383 * 173.49474 * 4 2 1 31 31 H 1.08999 * 113.61675 * 25.43302 * 7 5 2 32 32 H 1.09006 * 113.68997 * 254.54326 * 7 5 2 33 33 H 0.97003 * 120.00692 * 335.00825 * 10 8 7 34 34 H 1.07994 * 126.45801 * 359.97438 * 14 13 11 35 35 H 1.07997 * 126.06689 * 179.97438 * 15 14 13 36 36 H 1.09000 * 109.47206 * 125.02544 * 17 16 15 37 37 H 0.96693 * 113.99930 * 59.99798 * 18 17 16 38 38 H 1.48504 * 110.00132 * 58.68195 * 19 17 16 39 39 H 1.48501 * 109.99960 * 179.97438 * 19 17 16 40 40 H 0.96996 * 125.67918 * 179.97438 * 20 16 15 41 41 H 1.08993 * 113.61418 * 105.46781 * 21 5 2 42 42 H 1.09007 * 113.61167 * 334.56335 * 21 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 6 2.0401 -0.7214 1.2492 6 1 1.8184 -0.1814 2.1698 7 6 1.6571 -2.2098 1.3005 8 6 3.0674 -2.4726 1.8545 9 1 3.5329 -3.3733 1.4544 10 7 3.1488 -2.3909 3.3149 11 6 4.1169 -3.0579 3.9743 12 8 4.9235 -3.7275 3.3564 13 6 4.1981 -2.9765 5.4366 14 6 5.1297 -3.6027 6.2371 15 6 4.8368 -3.2530 7.5590 16 6 3.7559 -2.4369 7.5432 17 6 3.0986 -1.8293 8.7555 18 8 1.7754 -2.3514 8.8920 19 14 4.0913 -2.2479 10.2754 20 7 3.3579 -2.2611 6.2595 21 6 3.5031 -1.1823 1.1402 22 1 -0.3633 0.5138 0.8900 23 1 -0.3634 0.5139 -0.8899 24 1 -0.3633 -1.0277 -0.0005 25 1 3.1301 1.4424 -0.0005 26 1 1.6767 1.9563 -0.8899 27 1 1.6768 1.9562 0.8900 28 1 1.7748 -1.7770 -1.1930 29 1 1.5847 -0.2791 -2.1354 30 1 3.1238 -0.6215 -1.3095 31 1 1.4847 -2.6504 0.3186 32 1 0.8605 -2.4329 2.0104 33 1 2.5060 -1.8569 3.8075 34 1 5.9335 -4.2433 5.9058 35 1 5.3767 -3.5762 8.4367 36 1 3.0517 -0.7465 8.6391 37 1 1.7408 -3.3116 8.9999 38 1 5.4786 -1.7380 10.1324 39 1 3.4538 -1.6539 11.4779 40 1 2.6062 -1.7213 5.9692 41 1 4.1968 -0.5746 1.7211 42 1 3.8353 -1.3420 0.1143 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_6580494.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:44:22 Heat of formation + Delta-G solvation = -8.654941 kcal Electronic energy + Delta-G solvation = -22053.667063 eV Core-core repulsion = 18808.361936 eV Total energy + Delta-G solvation = -3245.305127 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.162 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.54959 -41.46827 -39.64612 -37.79558 -36.58318 -33.90030 -32.09763 -31.30753 -28.59307 -28.33002 -27.26755 -26.36098 -25.76807 -23.41921 -21.73487 -21.24283 -21.03288 -19.88698 -19.15616 -18.18442 -17.09262 -16.78157 -16.50124 -16.27912 -15.99364 -15.69980 -15.26467 -15.17404 -15.08366 -14.55233 -14.44353 -14.29553 -13.98682 -13.92506 -13.76703 -13.51341 -13.26835 -12.85724 -12.80549 -12.53160 -12.26690 -12.14508 -12.08653 -11.97124 -11.47292 -11.22272 -11.14906 -10.96631 -10.75758 -10.14943 -10.08348 -9.27174 -5.07567 0.35612 1.09755 1.52915 1.62662 1.82454 1.98159 2.13320 2.37607 3.26483 3.41220 3.44275 3.52124 3.63417 3.72324 3.82344 3.95251 4.14924 4.17238 4.18107 4.25640 4.38508 4.43066 4.60237 4.65134 4.66666 4.69749 4.76585 4.84093 4.88320 4.92640 4.98919 5.01613 5.02837 5.06539 5.09476 5.14429 5.28746 5.35690 5.37819 5.55110 5.61882 5.81972 6.19114 6.35249 6.42326 7.12646 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.059 4.059 3 C -0.141 4.141 4 C -0.149 4.149 5 C -0.099 4.099 6 H 0.085 0.915 7 C -0.144 4.144 8 C 0.120 3.880 9 H 0.106 0.894 10 N -0.714 5.714 11 C 0.592 3.408 12 O -0.522 6.522 13 C -0.051 4.051 14 C -0.097 4.097 15 C -0.199 4.199 16 C 0.021 3.979 17 C -0.056 4.056 18 O -0.543 6.543 19 Si 0.722 3.278 20 N -0.524 5.524 21 C -0.151 4.151 22 H 0.053 0.947 23 H 0.055 0.945 24 H 0.056 0.944 25 H 0.055 0.945 26 H 0.055 0.945 27 H 0.053 0.947 28 H 0.059 0.941 29 H 0.055 0.945 30 H 0.059 0.941 31 H 0.101 0.899 32 H 0.071 0.929 33 H 0.394 0.606 34 H 0.153 0.847 35 H 0.152 0.848 36 H 0.114 0.886 37 H 0.384 0.616 38 H -0.253 1.253 39 H -0.253 1.253 40 H 0.416 0.584 41 H 0.069 0.931 42 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.762 0.319 1.220 3.036 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.059 4.059 3 C -0.199 4.199 4 C -0.205 4.205 5 C -0.117 4.117 6 H 0.103 0.897 7 C -0.181 4.181 8 C 0.015 3.985 9 H 0.124 0.876 10 N -0.365 5.365 11 C 0.380 3.620 12 O -0.397 6.397 13 C -0.165 4.165 14 C -0.124 4.124 15 C -0.224 4.224 16 C -0.097 4.097 17 C -0.166 4.166 18 O -0.349 6.349 19 Si 0.621 3.379 20 N -0.120 5.120 21 C -0.189 4.189 22 H 0.072 0.928 23 H 0.074 0.926 24 H 0.075 0.925 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.072 0.928 28 H 0.078 0.922 29 H 0.074 0.926 30 H 0.078 0.922 31 H 0.119 0.881 32 H 0.090 0.910 33 H 0.228 0.772 34 H 0.171 0.829 35 H 0.169 0.831 36 H 0.131 0.869 37 H 0.232 0.768 38 H -0.177 1.177 39 H -0.178 1.178 40 H 0.253 0.747 41 H 0.087 0.913 42 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -1.988 0.851 1.277 2.511 hybrid contribution -0.890 1.055 -0.477 1.460 sum -2.878 1.906 0.799 3.543 Atomic orbital electron populations 1.21853 0.94417 1.01850 1.01749 1.20428 0.95533 0.95378 0.94579 1.21850 1.01097 0.95209 1.01722 1.22041 1.01228 1.00441 0.96833 1.22641 0.96027 0.94939 0.98132 0.89677 1.23461 0.95957 0.96458 1.02261 1.21862 0.97737 0.99781 0.79153 0.87647 1.45568 1.32438 1.51149 1.07337 1.17052 0.80921 0.79145 0.84873 1.90872 1.40452 1.40882 1.67540 1.20461 0.99109 1.06667 0.90246 1.21340 0.98887 1.00539 0.91604 1.20712 0.99676 1.03981 0.97992 1.21159 0.99302 1.03766 0.85436 1.24962 0.89713 1.00473 1.01446 1.86499 1.25046 1.27679 1.95673 0.94001 0.77761 0.91238 0.74880 1.41952 1.25619 1.38552 1.05890 1.23608 0.96552 0.96914 1.01839 0.92812 0.92608 0.92519 0.92591 0.92591 0.92838 0.92219 0.92568 0.92178 0.88094 0.91030 0.77248 0.82904 0.83067 0.86864 0.76829 1.17687 1.17827 0.74689 0.91259 0.88234 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.20 8.31 37.16 0.31 0.51 16 2 C -0.06 0.09 0.68 -154.51 -0.11 -0.02 16 3 C -0.14 0.14 8.43 37.16 0.31 0.45 16 4 C -0.15 0.21 7.48 37.16 0.28 0.49 16 5 C -0.10 0.18 2.91 -89.81 -0.26 -0.08 16 6 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 7 C -0.14 0.26 6.40 -25.92 -0.17 0.10 16 8 C 0.12 -0.02 4.32 -67.12 -0.29 -0.31 16 9 H 0.11 0.17 7.46 -51.93 -0.39 -0.21 16 10 N -0.71 0.16 5.26 -54.32 -0.29 -0.13 16 11 C 0.59 1.66 7.79 -12.85 -0.10 1.56 16 12 O -0.52 -3.45 16.48 5.20 0.09 -3.37 16 13 C -0.05 -0.08 7.06 -81.98 -0.58 -0.66 16 14 C -0.10 -0.16 10.65 -39.12 -0.42 -0.58 16 15 C -0.20 0.03 9.32 -39.98 -0.37 -0.34 16 16 C 0.02 -0.01 6.46 -81.95 -0.53 -0.54 16 17 C -0.06 0.10 3.08 36.00 0.11 0.21 16 18 O -0.54 0.78 12.88 -35.23 -0.45 0.32 16 19 Si 0.72 -1.68 30.56 -169.99 -5.19 -6.87 16 20 N -0.52 0.41 5.99 -5.69 -0.03 0.38 16 21 C -0.15 0.10 7.09 -25.92 -0.18 -0.08 16 22 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 23 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.06 -0.08 7.57 -51.93 -0.39 -0.48 16 25 H 0.05 -0.04 8.10 -51.93 -0.42 -0.46 16 26 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 27 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.06 -0.10 6.05 -51.93 -0.31 -0.41 16 29 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 30 H 0.06 -0.08 6.46 -51.93 -0.34 -0.41 16 31 H 0.10 -0.21 6.09 -51.93 -0.32 -0.52 16 32 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 33 H 0.39 -1.05 7.83 -40.82 -0.32 -1.37 16 34 H 0.15 0.22 8.06 -52.49 -0.42 -0.20 16 35 H 0.15 -0.36 6.19 -52.49 -0.32 -0.68 16 36 H 0.11 -0.19 7.96 -51.93 -0.41 -0.60 16 37 H 0.38 -1.87 8.70 45.56 0.40 -1.48 16 38 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 39 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 40 H 0.42 -1.25 8.19 -40.82 -0.33 -1.58 16 41 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 42 H 0.10 -0.08 5.69 -51.92 -0.30 -0.38 16 LS Contribution 334.86 15.07 5.05 5.05 Total: 0.00 -6.86 334.86 -9.29 -16.14 By element: Atomic # 1 Polarization: -5.76 SS G_CDS: -6.46 Total: -12.22 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: -1.99 Total: 0.70 kcal Atomic # 7 Polarization: 0.57 SS G_CDS: -0.32 Total: 0.25 kcal Atomic # 8 Polarization: -2.68 SS G_CDS: -0.37 Total: -3.05 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.19 Total: -6.87 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -6.86 -9.29 -16.14 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_6580494.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.490 kcal (2) G-P(sol) polarization free energy of solvation -6.855 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.634 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.289 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.145 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.655 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds