Wall clock time and date at job start Tue Mar 9 2021 13:45:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35662 * 116.99493 * 2 1 4 4 C 1.38396 * 120.12407 * 0.02787 * 3 2 1 5 5 C 1.38728 * 120.03372 * 179.97438 * 4 3 2 6 6 O 1.35717 * 119.86407 * 179.97438 * 5 4 3 7 7 C 1.42900 * 116.99855 * 359.97438 * 6 5 4 8 8 C 1.39139 * 120.27064 * 359.97222 * 5 4 3 9 9 C 1.50703 * 119.87750 * 179.97438 * 8 5 4 10 10 O 1.42897 * 109.47359 * 285.00752 * 9 8 5 11 11 Si 1.86304 * 109.47074 * 165.00348 * 9 8 5 12 12 C 1.37581 * 120.24218 * 359.74731 * 8 5 4 13 13 C 1.39817 * 119.96392 * 0.53096 * 12 8 5 14 14 C 1.47305 * 120.13579 * 179.74329 * 13 12 8 15 15 O 1.21619 * 119.99578 * 179.72128 * 14 13 12 16 16 N 1.34773 * 120.00121 * 359.72531 * 14 13 12 17 17 C 1.46493 * 120.00282 * 180.02562 * 16 14 13 18 18 C 1.52998 * 109.47640 * 179.97438 * 17 16 14 19 19 H 1.09002 * 112.84870 * 43.80041 * 18 17 16 20 20 C 1.53776 * 113.61906 * 174.99895 * 18 17 16 21 21 C 1.53774 * 87.08408 * 89.19897 * 20 18 17 22 22 O 1.42903 * 113.61673 * 270.88945 * 21 20 18 23 23 C 1.53000 * 113.61561 * 140.06618 * 21 20 18 24 24 F 1.39903 * 109.46774 * 181.53048 * 23 21 20 25 25 F 1.39896 * 109.46912 * 301.52777 * 23 21 20 26 26 F 1.39893 * 109.47116 * 61.53444 * 23 21 20 27 27 C 1.53777 * 87.08184 * 25.43089 * 21 20 18 28 28 H 1.08994 * 109.47493 * 59.99777 * 1 2 3 29 29 H 1.09003 * 109.46883 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47146 * 299.99599 * 1 2 3 31 31 H 1.08007 * 119.98576 * 359.97438 * 4 3 2 32 32 H 1.09008 * 109.47101 * 300.00069 * 7 6 5 33 33 H 1.09000 * 109.47205 * 59.99852 * 7 6 5 34 34 H 1.09002 * 109.46669 * 180.02562 * 7 6 5 35 35 H 1.09003 * 109.47162 * 45.00903 * 9 8 5 36 36 H 0.96705 * 113.99359 * 299.99734 * 10 9 8 37 37 H 1.48497 * 110.00244 * 180.02562 * 11 9 8 38 38 H 1.48504 * 110.00098 * 301.32513 * 11 9 8 39 39 H 1.08006 * 120.01812 * 180.27279 * 12 8 5 40 40 H 0.97009 * 119.99688 * 359.97438 * 16 14 13 41 41 H 1.09004 * 109.47181 * 59.99317 * 17 16 14 42 42 H 1.09007 * 109.47065 * 299.99870 * 17 16 14 43 43 H 1.09002 * 113.61135 * 334.64990 * 20 18 17 44 44 H 1.09001 * 113.69206 * 203.76086 * 20 18 17 45 45 H 0.96700 * 114.00311 * 179.97438 * 22 21 20 46 46 H 1.09007 * 113.61025 * 89.11391 * 27 21 20 47 47 H 1.08997 * 113.62410 * 220.02130 * 27 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 1.2935 2.3711 0.0006 5 6 1.9251 3.6062 0.0011 6 8 1.1850 4.7438 0.0012 7 6 -0.2361 4.5931 0.0001 8 6 3.3144 3.6835 0.0017 9 6 3.9913 5.0299 0.0017 10 8 3.8942 5.6120 -1.2998 11 14 5.7860 4.8227 0.4569 12 6 4.0723 2.5353 0.0069 13 6 3.4461 1.2852 0.0005 14 6 4.2539 0.0534 0.0004 15 8 3.7066 -1.0326 -0.0001 16 7 5.5995 0.1300 0.0008 17 6 6.4029 -1.0950 0.0002 18 6 7.8888 -0.7305 0.0003 19 1 8.1272 0.0741 0.6959 20 6 8.8216 -1.9470 0.1224 21 6 8.7889 -2.0273 -1.4129 22 8 7.7236 -2.8327 -1.9215 23 6 10.1429 -2.3695 -2.0377 24 9 10.0225 -2.3857 -3.4315 25 9 11.0862 -1.4070 -1.6623 26 9 10.5578 -3.6285 -1.5909 27 6 8.4739 -0.5221 -1.4065 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 0.2148 2.3165 0.0006 32 1 -0.5426 4.0442 -0.8905 33 1 -0.5439 4.0434 0.8895 34 1 -0.7057 5.5768 -0.0002 35 1 3.5051 5.6811 0.7281 36 1 4.3067 5.0852 -1.9980 37 1 6.4647 6.1435 0.4611 38 1 5.9006 4.1890 1.7950 39 1 5.1504 2.5995 0.0118 40 1 6.0360 0.9963 0.0009 41 1 6.1727 -1.6800 -0.8903 42 1 6.1722 -1.6813 0.8897 43 1 8.3602 -2.8033 0.6144 44 1 9.8050 -1.7061 0.5262 45 1 7.6975 -2.8868 -2.8866 46 1 9.3620 0.1098 -1.4208 47 1 7.7319 -0.2280 -2.1488 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:02 Heat of formation + Delta-G solvation = -270.786695 kcal Electronic energy + Delta-G solvation = -38094.845131 eV Core-core repulsion = 32410.964386 eV Total energy + Delta-G solvation = -5683.880745 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.137 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -51.19417 -48.74581 -48.64673 -42.07657 -41.36014 -40.31828 -39.66133 -38.44910 -36.96047 -36.61560 -35.05715 -32.23764 -31.97606 -29.91096 -29.09373 -28.30623 -27.29559 -26.97342 -26.09969 -24.41551 -23.51148 -22.63231 -21.47067 -20.72195 -20.09462 -19.98172 -19.48026 -19.37281 -18.71741 -18.13970 -17.92241 -17.34091 -17.24476 -16.89588 -16.63406 -16.41711 -16.31153 -16.25598 -16.04472 -15.78673 -15.68922 -15.53804 -15.41693 -15.39272 -15.11139 -15.02740 -14.84140 -14.78624 -14.55349 -14.48917 -14.21603 -14.12369 -13.89255 -13.63079 -13.51402 -13.29951 -13.03428 -12.77395 -12.63682 -12.56264 -12.54729 -12.26387 -12.20575 -11.98949 -11.72586 -11.65885 -11.25531 -10.68651 -10.41807 -9.98913 -9.90444 -9.13930 -5.17253 -0.21290 0.10507 1.22258 1.51623 1.55408 1.87112 1.92684 2.03681 2.10336 2.14564 2.35591 2.57391 2.62997 2.71264 2.83634 3.24010 3.36077 3.41674 3.46136 3.47332 3.59762 3.71047 3.71477 3.84412 3.97987 4.03843 4.07834 4.12698 4.12973 4.21683 4.22986 4.30936 4.37590 4.41562 4.49246 4.53303 4.57089 4.65377 4.73705 4.76513 4.83625 4.92434 5.01188 5.12979 5.28240 5.49338 5.99508 6.08362 6.27965 6.57249 6.61121 7.39469 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.234 3.766 4 C -0.314 4.314 5 C 0.222 3.778 6 O -0.296 6.296 7 C 0.021 3.979 8 C -0.199 4.199 9 C -0.050 4.050 10 O -0.535 6.535 11 Si 0.672 3.328 12 C -0.005 4.005 13 C -0.208 4.208 14 C 0.565 3.435 15 O -0.516 6.516 16 N -0.733 5.733 17 C 0.134 3.866 18 C -0.113 4.113 19 H 0.100 0.900 20 C -0.110 4.110 21 C 0.062 3.938 22 O -0.507 6.507 23 C 0.432 3.568 24 F -0.183 7.183 25 F -0.175 7.175 26 F -0.175 7.175 27 C -0.154 4.154 28 H 0.058 0.942 29 H 0.107 0.893 30 H 0.057 0.943 31 H 0.145 0.855 32 H 0.060 0.940 33 H 0.058 0.942 34 H 0.107 0.893 35 H 0.114 0.886 36 H 0.375 0.625 37 H -0.250 1.250 38 H -0.251 1.251 39 H 0.139 0.861 40 H 0.396 0.604 41 H 0.091 0.909 42 H 0.073 0.927 43 H 0.099 0.901 44 H 0.112 0.888 45 H 0.391 0.609 46 H 0.109 0.891 47 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.054 2.477 -0.664 2.773 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.183 6.183 3 C 0.185 3.815 4 C -0.334 4.334 5 C 0.174 3.826 6 O -0.207 6.207 7 C -0.073 4.073 8 C -0.200 4.200 9 C -0.160 4.160 10 O -0.340 6.340 11 Si 0.573 3.427 12 C -0.023 4.023 13 C -0.212 4.212 14 C 0.353 3.647 15 O -0.391 6.391 16 N -0.386 5.386 17 C 0.011 3.989 18 C -0.132 4.132 19 H 0.118 0.882 20 C -0.147 4.147 21 C 0.018 3.982 22 O -0.314 6.314 23 C 0.377 3.623 24 F -0.165 7.165 25 F -0.157 7.157 26 F -0.156 7.156 27 C -0.192 4.192 28 H 0.076 0.924 29 H 0.126 0.874 30 H 0.076 0.924 31 H 0.162 0.838 32 H 0.079 0.921 33 H 0.077 0.923 34 H 0.125 0.875 35 H 0.132 0.868 36 H 0.222 0.778 37 H -0.175 1.175 38 H -0.176 1.176 39 H 0.156 0.844 40 H 0.230 0.770 41 H 0.109 0.891 42 H 0.092 0.908 43 H 0.118 0.882 44 H 0.131 0.869 45 H 0.242 0.758 46 H 0.127 0.873 47 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -1.111 2.241 0.852 2.643 hybrid contribution -0.535 0.486 -0.596 0.937 sum -1.646 2.727 0.256 3.196 Atomic orbital electron populations 1.23245 0.78213 1.04881 1.01325 1.86408 1.21186 1.25001 1.85753 1.18721 0.90652 0.84405 0.87765 1.21310 1.01155 0.91515 1.19388 1.18715 0.90455 0.84696 0.88709 1.86161 1.19466 1.28515 1.86574 1.23217 0.77817 1.04655 1.01645 1.19446 0.90860 0.96394 1.13316 1.24829 1.09697 0.92258 0.89255 1.86557 1.82063 1.49295 1.16086 0.95484 0.77300 0.84646 0.85277 1.20672 0.98407 0.90001 0.93207 1.19052 0.90666 0.93576 1.17951 1.17751 0.81648 0.88550 0.76751 1.90866 1.71348 1.28656 1.48279 1.45839 1.05985 1.09663 1.77157 1.21267 0.86944 0.86546 1.04186 1.22414 0.94377 0.99008 0.97419 0.88182 1.23124 1.01799 0.99780 0.90024 1.23648 0.82763 0.94050 0.97763 1.86658 1.46757 1.70172 1.27792 1.21323 0.89223 0.74975 0.76733 1.93190 1.96089 1.96251 1.30923 1.93184 1.67737 1.63652 1.91083 1.93227 1.91736 1.41807 1.88874 1.23817 1.03291 0.93211 0.98848 0.92367 0.87435 0.92427 0.83780 0.92148 0.92297 0.87509 0.86835 0.77785 1.17458 1.17592 0.84384 0.76959 0.89114 0.90827 0.88229 0.86929 0.75817 0.87275 0.88645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.27 -0.91 8.56 -40.61 -0.35 -1.25 16 3 C 0.23 0.55 6.70 -38.73 -0.26 0.29 16 4 C -0.31 -0.20 8.01 -39.34 -0.31 -0.51 16 5 C 0.22 0.25 6.67 -39.07 -0.26 -0.01 16 6 O -0.30 -0.36 9.80 -18.86 -0.18 -0.54 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 8 C -0.20 -0.03 5.27 -104.53 -0.55 -0.58 16 9 C -0.05 0.01 2.37 36.01 0.09 0.10 16 10 O -0.54 -0.16 12.88 -35.23 -0.45 -0.61 16 11 Si 0.67 -1.38 29.90 -169.99 -5.08 -6.46 16 12 C 0.00 0.00 8.14 -39.23 -0.32 -0.31 16 13 C -0.21 -0.34 5.89 -104.83 -0.62 -0.96 16 14 C 0.57 1.57 7.76 -12.58 -0.10 1.47 16 15 O -0.52 -3.57 15.15 -16.66 -0.25 -3.82 16 16 N -0.73 0.69 5.50 -61.42 -0.34 0.36 16 17 C 0.13 -0.12 5.26 -4.05 -0.02 -0.15 16 18 C -0.11 0.41 3.94 -89.81 -0.35 0.05 16 19 H 0.10 -0.51 8.14 -51.93 -0.42 -0.94 16 20 C -0.11 0.30 6.88 -25.93 -0.18 0.12 16 21 C 0.06 -0.13 1.34 -89.81 -0.12 -0.25 16 22 O -0.51 0.70 11.44 -35.23 -0.40 0.29 16 23 C 0.43 -0.16 2.84 37.16 0.11 -0.06 16 24 F -0.18 -0.04 16.69 2.25 0.04 0.00 16 25 F -0.18 0.03 15.75 2.25 0.04 0.07 16 26 F -0.18 -0.27 17.20 2.25 0.04 -0.23 16 27 C -0.15 0.60 6.91 -25.92 -0.18 0.42 16 28 H 0.06 -0.14 7.66 -51.93 -0.40 -0.53 16 29 H 0.11 -0.21 8.14 -51.93 -0.42 -0.64 16 30 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 31 H 0.14 -0.22 4.50 -52.48 -0.24 -0.45 16 32 H 0.06 -0.19 7.65 -51.92 -0.40 -0.58 16 33 H 0.06 -0.19 7.65 -51.93 -0.40 -0.58 16 34 H 0.11 -0.37 8.14 -51.93 -0.42 -0.80 16 35 H 0.11 0.11 7.82 -51.93 -0.41 -0.29 16 36 H 0.38 -1.45 8.70 45.56 0.40 -1.05 16 37 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 38 H -0.25 0.00 7.11 56.52 0.40 0.40 16 39 H 0.14 -0.59 3.43 -52.48 -0.18 -0.77 16 40 H 0.40 -1.61 6.49 -40.82 -0.26 -1.87 16 41 H 0.09 0.06 6.13 -51.93 -0.32 -0.26 16 42 H 0.07 0.03 8.14 -51.92 -0.42 -0.39 16 43 H 0.10 -0.21 8.10 -51.93 -0.42 -0.63 16 44 H 0.11 -0.43 7.83 -51.93 -0.41 -0.83 16 45 H 0.39 -1.60 8.47 45.56 0.39 -1.21 16 46 H 0.11 -0.51 7.18 -51.92 -0.37 -0.88 16 47 H 0.09 -0.40 8.10 -51.93 -0.42 -0.82 16 LS Contribution 394.59 15.07 5.95 5.95 Total: 0.00 -11.50 394.59 -6.83 -18.33 By element: Atomic # 1 Polarization: -8.89 SS G_CDS: -4.72 Total: -13.61 kcal Atomic # 6 Polarization: 2.65 SS G_CDS: -1.10 Total: 1.55 kcal Atomic # 7 Polarization: 0.69 SS G_CDS: -0.34 Total: 0.36 kcal Atomic # 8 Polarization: -4.30 SS G_CDS: -1.64 Total: -5.94 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.11 Total: -0.16 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.08 Total: -6.46 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -11.50 -6.83 -18.33 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -252.460 kcal (2) G-P(sol) polarization free energy of solvation -11.501 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -263.961 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.826 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.327 kcal (6) G-S(sol) free energy of system = (1) + (5) -270.787 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds