Wall clock time and date at job start Tue Mar 9 2021 13:45:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35662 * 116.99493 * 2 1 4 4 C 1.38396 * 120.12407 * 0.02787 * 3 2 1 5 5 C 1.38728 * 120.03372 * 179.97438 * 4 3 2 6 6 O 1.35717 * 119.86407 * 179.97438 * 5 4 3 7 7 C 1.42900 * 116.99855 * 359.97438 * 6 5 4 8 8 C 1.39139 * 120.27064 * 359.97222 * 5 4 3 9 9 C 1.50703 * 119.87750 * 179.97438 * 8 5 4 10 10 O 1.42897 * 109.47359 * 285.00752 * 9 8 5 11 11 Si 1.86304 * 109.47074 * 165.00348 * 9 8 5 12 12 C 1.37581 * 120.24218 * 359.74731 * 8 5 4 13 13 C 1.39817 * 119.96392 * 0.53096 * 12 8 5 14 14 C 1.47305 * 120.13579 * 179.74329 * 13 12 8 15 15 O 1.21619 * 119.99578 * 179.72128 * 14 13 12 16 16 N 1.34773 * 120.00121 * 359.72531 * 14 13 12 17 17 C 1.46493 * 120.00282 * 180.02562 * 16 14 13 18 18 C 1.52998 * 109.47640 * 179.97438 * 17 16 14 19 19 H 1.09002 * 112.84870 * 43.80041 * 18 17 16 20 20 C 1.53776 * 113.61906 * 174.99895 * 18 17 16 21 21 C 1.53774 * 87.08408 * 89.19897 * 20 18 17 22 22 O 1.42903 * 113.61673 * 270.88945 * 21 20 18 23 23 C 1.53000 * 113.61561 * 140.06618 * 21 20 18 24 24 F 1.39903 * 109.46774 * 181.53048 * 23 21 20 25 25 F 1.39896 * 109.46912 * 301.52777 * 23 21 20 26 26 F 1.39893 * 109.47116 * 61.53444 * 23 21 20 27 27 C 1.53777 * 87.08184 * 25.43089 * 21 20 18 28 28 H 1.08994 * 109.47493 * 59.99777 * 1 2 3 29 29 H 1.09003 * 109.46883 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47146 * 299.99599 * 1 2 3 31 31 H 1.08007 * 119.98576 * 359.97438 * 4 3 2 32 32 H 1.09008 * 109.47101 * 300.00069 * 7 6 5 33 33 H 1.09000 * 109.47205 * 59.99852 * 7 6 5 34 34 H 1.09002 * 109.46669 * 180.02562 * 7 6 5 35 35 H 1.09003 * 109.47162 * 45.00903 * 9 8 5 36 36 H 0.96705 * 113.99359 * 299.99734 * 10 9 8 37 37 H 1.48497 * 110.00244 * 180.02562 * 11 9 8 38 38 H 1.48504 * 110.00098 * 301.32513 * 11 9 8 39 39 H 1.08006 * 120.01812 * 180.27279 * 12 8 5 40 40 H 0.97009 * 119.99688 * 359.97438 * 16 14 13 41 41 H 1.09004 * 109.47181 * 59.99317 * 17 16 14 42 42 H 1.09007 * 109.47065 * 299.99870 * 17 16 14 43 43 H 1.09002 * 113.61135 * 334.64990 * 20 18 17 44 44 H 1.09001 * 113.69206 * 203.76086 * 20 18 17 45 45 H 0.96700 * 114.00311 * 179.97438 * 22 21 20 46 46 H 1.09007 * 113.61025 * 89.11391 * 27 21 20 47 47 H 1.08997 * 113.62410 * 220.02130 * 27 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 1.2935 2.3711 0.0006 5 6 1.9251 3.6062 0.0011 6 8 1.1850 4.7438 0.0012 7 6 -0.2361 4.5931 0.0001 8 6 3.3144 3.6835 0.0017 9 6 3.9913 5.0299 0.0017 10 8 3.8942 5.6120 -1.2998 11 14 5.7860 4.8227 0.4569 12 6 4.0723 2.5353 0.0069 13 6 3.4461 1.2852 0.0005 14 6 4.2539 0.0534 0.0004 15 8 3.7066 -1.0326 -0.0001 16 7 5.5995 0.1300 0.0008 17 6 6.4029 -1.0950 0.0002 18 6 7.8888 -0.7305 0.0003 19 1 8.1272 0.0741 0.6959 20 6 8.8216 -1.9470 0.1224 21 6 8.7889 -2.0273 -1.4129 22 8 7.7236 -2.8327 -1.9215 23 6 10.1429 -2.3695 -2.0377 24 9 10.0225 -2.3857 -3.4315 25 9 11.0862 -1.4070 -1.6623 26 9 10.5578 -3.6285 -1.5909 27 6 8.4739 -0.5221 -1.4065 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 0.2148 2.3165 0.0006 32 1 -0.5426 4.0442 -0.8905 33 1 -0.5439 4.0434 0.8895 34 1 -0.7057 5.5768 -0.0002 35 1 3.5051 5.6811 0.7281 36 1 4.3067 5.0852 -1.9980 37 1 6.4647 6.1435 0.4611 38 1 5.9006 4.1890 1.7950 39 1 5.1504 2.5995 0.0118 40 1 6.0360 0.9963 0.0009 41 1 6.1727 -1.6800 -0.8903 42 1 6.1722 -1.6813 0.8897 43 1 8.3602 -2.8033 0.6144 44 1 9.8050 -1.7061 0.5262 45 1 7.6975 -2.8868 -2.8866 46 1 9.3620 0.1098 -1.4208 47 1 7.7319 -0.2280 -2.1488 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664666_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:01 Heat of formation + Delta-G solvation = -275.689744 kcal Electronic energy + Delta-G solvation = -38095.057743 eV Core-core repulsion = 32410.964386 eV Total energy + Delta-G solvation = -5684.093357 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.137 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -51.17288 -48.71214 -48.66395 -42.09216 -41.19687 -40.34239 -39.73329 -38.43605 -36.96214 -36.52457 -35.07648 -32.24132 -31.97876 -29.81999 -28.98664 -28.21442 -27.03124 -26.90566 -26.07737 -24.41156 -23.39354 -22.60511 -21.54047 -20.58189 -20.02450 -19.91831 -19.46036 -19.32251 -18.70687 -18.12578 -17.90799 -17.23898 -17.18630 -16.90114 -16.62457 -16.33376 -16.28888 -16.21809 -15.98052 -15.77617 -15.63518 -15.53576 -15.36214 -15.34488 -15.10434 -15.01022 -14.84523 -14.79196 -14.52327 -14.39968 -14.17613 -14.03659 -13.86394 -13.50793 -13.37046 -13.20457 -12.87799 -12.66735 -12.53934 -12.52104 -12.36226 -12.24020 -12.01886 -11.95694 -11.64139 -11.49067 -11.10049 -10.85171 -10.36314 -10.06030 -9.90011 -9.17453 -5.03277 -0.24368 0.09273 1.32955 1.61174 1.67735 1.78802 2.03439 2.11792 2.12443 2.19471 2.55768 2.64222 2.67414 2.77932 3.01534 3.44227 3.46315 3.52177 3.54373 3.62205 3.69490 3.75147 3.85855 3.92301 4.12871 4.18769 4.24656 4.25931 4.27133 4.28430 4.48808 4.51317 4.58910 4.63052 4.63412 4.65815 4.76357 4.82356 4.88400 4.92070 4.98642 5.01634 5.04467 5.24824 5.31164 5.51094 6.03555 6.29442 6.37103 6.61106 6.86796 7.31992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.304 6.304 3 C 0.215 3.785 4 C -0.312 4.312 5 C 0.211 3.789 6 O -0.314 6.314 7 C 0.013 3.987 8 C -0.204 4.204 9 C -0.064 4.064 10 O -0.554 6.554 11 Si 0.778 3.222 12 C 0.011 3.989 13 C -0.224 4.224 14 C 0.562 3.438 15 O -0.567 6.567 16 N -0.714 5.714 17 C 0.135 3.865 18 C -0.103 4.103 19 H 0.127 0.873 20 C -0.114 4.114 21 C 0.057 3.943 22 O -0.522 6.522 23 C 0.429 3.571 24 F -0.188 7.188 25 F -0.175 7.175 26 F -0.190 7.190 27 C -0.143 4.143 28 H 0.071 0.929 29 H 0.112 0.888 30 H 0.070 0.930 31 H 0.161 0.839 32 H 0.069 0.931 33 H 0.068 0.932 34 H 0.118 0.882 35 H 0.096 0.904 36 H 0.393 0.607 37 H -0.296 1.296 38 H -0.272 1.272 39 H 0.171 0.829 40 H 0.413 0.587 41 H 0.074 0.926 42 H 0.056 0.944 43 H 0.088 0.912 44 H 0.126 0.874 45 H 0.400 0.600 46 H 0.125 0.875 47 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.289 3.748 -0.698 3.823 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.215 6.215 3 C 0.166 3.834 4 C -0.331 4.331 5 C 0.163 3.837 6 O -0.226 6.226 7 C -0.082 4.082 8 C -0.205 4.205 9 C -0.173 4.173 10 O -0.362 6.362 11 Si 0.682 3.318 12 C -0.007 4.007 13 C -0.229 4.229 14 C 0.351 3.649 15 O -0.447 6.447 16 N -0.367 5.367 17 C 0.012 3.988 18 C -0.121 4.121 19 H 0.145 0.855 20 C -0.152 4.152 21 C 0.013 3.987 22 O -0.331 6.331 23 C 0.375 3.625 24 F -0.170 7.170 25 F -0.157 7.157 26 F -0.172 7.172 27 C -0.180 4.180 28 H 0.090 0.910 29 H 0.131 0.869 30 H 0.088 0.912 31 H 0.178 0.822 32 H 0.087 0.913 33 H 0.087 0.913 34 H 0.136 0.864 35 H 0.114 0.886 36 H 0.243 0.757 37 H -0.224 1.224 38 H -0.198 1.198 39 H 0.188 0.812 40 H 0.251 0.749 41 H 0.092 0.908 42 H 0.075 0.925 43 H 0.106 0.894 44 H 0.144 0.856 45 H 0.252 0.748 46 H 0.143 0.857 47 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -0.345 3.528 0.786 3.631 hybrid contribution -0.829 0.143 -0.606 1.037 sum -1.173 3.670 0.180 3.857 Atomic orbital electron populations 1.23459 0.76632 1.05714 1.02568 1.86372 1.23104 1.25933 1.86056 1.19013 0.91277 0.84599 0.88504 1.21408 1.01958 0.90836 1.18931 1.18975 0.91101 0.84838 0.88827 1.86142 1.21036 1.28848 1.86574 1.23452 0.76353 1.05772 1.02577 1.19626 0.90817 0.96873 1.13207 1.25118 1.11624 0.91555 0.88973 1.86512 1.82684 1.50203 1.16804 0.94326 0.73280 0.81498 0.82736 1.20865 0.99799 0.88526 0.91508 1.19169 0.90679 0.93968 1.19050 1.18006 0.82629 0.88206 0.76104 1.90835 1.72479 1.30407 1.50931 1.45685 1.04905 1.10688 1.75468 1.21209 0.88736 0.86276 1.02623 1.22312 0.92024 0.99347 0.98445 0.85481 1.23237 1.02601 0.99826 0.89486 1.23855 0.81542 0.95274 0.97982 1.86643 1.46990 1.70668 1.28786 1.21663 0.89951 0.74375 0.76539 1.93175 1.96133 1.96237 1.31444 1.93177 1.67935 1.63495 1.91051 1.93194 1.91994 1.42946 1.89028 1.23841 1.03936 0.91735 0.98536 0.91037 0.86926 0.91192 0.82191 0.91252 0.91314 0.86386 0.88601 0.75746 1.22421 1.19797 0.81214 0.74873 0.90785 0.92516 0.89367 0.85562 0.74783 0.85704 0.88001 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.30 -2.49 8.56 -68.81 -0.59 -3.07 16 3 C 0.22 1.20 6.70 22.82 0.15 1.35 16 4 C -0.31 -0.49 8.01 22.42 0.18 -0.31 16 5 C 0.21 0.50 6.67 22.60 0.15 0.65 16 6 O -0.31 -0.82 9.80 -90.38 -0.89 -1.71 16 7 C 0.01 -0.06 9.80 113.37 1.11 1.05 16 8 C -0.20 0.02 5.27 -19.80 -0.10 -0.08 16 9 C -0.06 0.06 2.37 71.24 0.17 0.22 16 10 O -0.55 -0.05 12.88 -148.98 -1.92 -1.97 16 11 Si 0.78 -4.34 29.90 68.60 2.05 -2.28 16 12 C 0.01 -0.03 8.14 22.50 0.18 0.15 16 13 C -0.22 -0.81 5.89 -20.00 -0.12 -0.92 16 14 C 0.56 3.54 7.76 86.63 0.67 4.21 16 15 O -0.57 -9.03 15.15 16.87 0.26 -8.78 16 16 N -0.71 1.73 5.50 -466.50 -2.57 -0.84 16 17 C 0.13 -0.23 5.26 86.38 0.45 0.22 16 18 C -0.10 0.88 3.94 -10.27 -0.04 0.84 16 19 H 0.13 -1.71 8.14 -2.39 -0.02 -1.73 16 20 C -0.11 0.69 6.88 31.12 0.21 0.90 16 21 C 0.06 -0.25 1.34 -10.27 -0.01 -0.26 16 22 O -0.52 1.06 11.44 -148.98 -1.70 -0.64 16 23 C 0.43 -0.35 2.84 71.98 0.20 -0.15 16 24 F -0.19 -0.10 16.69 44.97 0.75 0.66 16 25 F -0.18 0.20 15.75 44.97 0.71 0.91 16 26 F -0.19 -0.70 17.20 44.97 0.77 0.08 16 27 C -0.14 1.35 6.91 31.12 0.22 1.57 16 28 H 0.07 -0.31 7.66 -2.39 -0.02 -0.33 16 29 H 0.11 -0.33 8.14 -2.39 -0.02 -0.35 16 30 H 0.07 -0.29 7.66 -2.39 -0.02 -0.31 16 31 H 0.16 -0.48 4.50 -2.91 -0.01 -0.50 16 32 H 0.07 -0.45 7.65 -2.38 -0.02 -0.47 16 33 H 0.07 -0.46 7.65 -2.39 -0.02 -0.48 16 34 H 0.12 -0.86 8.14 -2.39 -0.02 -0.88 16 35 H 0.10 0.23 7.82 -2.39 -0.02 0.22 16 36 H 0.39 -3.48 8.70 -74.05 -0.64 -4.13 16 37 H -0.30 -0.70 7.11 99.48 0.71 0.00 16 38 H -0.27 0.54 7.11 99.48 0.71 1.25 16 39 H 0.17 -1.86 3.43 -2.91 -0.01 -1.87 16 40 H 0.41 -4.22 6.49 -92.70 -0.60 -4.82 16 41 H 0.07 0.17 6.13 -2.38 -0.01 0.15 16 42 H 0.06 0.12 8.14 -2.38 -0.02 0.10 16 43 H 0.09 -0.31 8.10 -2.39 -0.02 -0.33 16 44 H 0.13 -1.11 7.83 -2.39 -0.02 -1.13 16 45 H 0.40 -2.93 8.47 -74.06 -0.63 -3.56 16 46 H 0.12 -1.50 7.18 -2.38 -0.02 -1.52 16 47 H 0.10 -1.04 8.10 -2.39 -0.02 -1.06 16 Total: 0.00 -29.52 394.59 0.67 -28.84 By element: Atomic # 1 Polarization: -20.99 SS G_CDS: -0.74 Total: -21.73 kcal Atomic # 6 Polarization: 6.00 SS G_CDS: 4.54 Total: 10.54 kcal Atomic # 7 Polarization: 1.73 SS G_CDS: -2.57 Total: -0.84 kcal Atomic # 8 Polarization: -11.34 SS G_CDS: -4.84 Total: -16.18 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 2.23 Total: 1.64 kcal Atomic # 14 Polarization: -4.34 SS G_CDS: 2.05 Total: -2.28 kcal Total: -29.52 0.67 -28.84 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -246.845 kcal (2) G-P(sol) polarization free energy of solvation -29.520 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -276.364 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.675 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.845 kcal (6) G-S(sol) free energy of system = (1) + (5) -275.690 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds