Wall clock time and date at job start Tue Mar 9 2021 13:45:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86297 * 109.47127 * 2 1 4 4 C 1.50694 * 109.47023 * 120.00070 * 2 1 3 5 5 C 1.38614 * 119.84254 * 195.02016 * 4 2 1 6 6 F 1.35102 * 119.91733 * 0.02562 * 5 4 2 7 7 C 1.38111 * 120.16590 * 179.76385 * 5 4 2 8 8 C 1.39612 * 119.85060 * 0.46424 * 7 5 4 9 9 C 1.47699 * 120.15559 * 179.78882 * 8 7 5 10 10 O 1.21571 * 120.00023 * 179.72672 * 9 8 7 11 11 N 1.34777 * 120.00227 * 359.73012 * 9 8 7 12 12 C 1.46494 * 120.00431 * 180.02562 * 11 9 8 13 13 C 1.52995 * 109.47338 * 179.97438 * 12 11 9 14 14 H 1.08993 * 112.90953 * 316.24873 * 13 12 11 15 15 C 1.53778 * 113.61555 * 87.50001 * 13 12 11 16 16 C 1.53778 * 87.08449 * 89.11552 * 15 13 12 17 17 O 1.42902 * 113.61795 * 270.88711 * 16 15 13 18 18 C 1.53001 * 113.69389 * 139.99094 * 16 15 13 19 19 F 1.39903 * 109.46868 * 322.46869 * 18 16 15 20 20 F 1.39902 * 109.46744 * 82.46645 * 18 16 15 21 21 F 1.39898 * 109.47451 * 202.46901 * 18 16 15 22 22 C 1.53784 * 113.61429 * 184.99742 * 13 12 11 23 23 C 1.39844 * 119.69159 * 359.51927 * 8 7 5 24 24 F 1.35106 * 120.08547 * 180.27118 * 23 8 7 25 25 C 1.38229 * 119.84336 * 14.99920 * 4 2 1 26 26 H 0.96699 * 113.99874 * 300.00155 * 1 2 3 27 27 H 1.09002 * 109.47041 * 240.00207 * 2 1 3 28 28 H 1.48506 * 110.00207 * 178.68107 * 3 2 1 29 29 H 1.48500 * 110.00070 * 299.99561 * 3 2 1 30 30 H 1.07999 * 120.07925 * 180.26158 * 7 5 4 31 31 H 0.97000 * 119.99369 * 359.97438 * 11 9 8 32 32 H 1.09002 * 109.47493 * 59.99092 * 12 11 9 33 33 H 1.09006 * 109.46717 * 299.99586 * 12 11 9 34 34 H 1.08999 * 113.61526 * 334.56887 * 15 13 12 35 35 H 1.09004 * 113.61886 * 203.66897 * 15 13 12 36 36 H 0.96699 * 113.99936 * 277.49636 * 17 16 15 37 37 H 1.09004 * 113.61451 * 156.33669 * 22 13 12 38 38 H 1.08994 * 113.61477 * 25.42971 * 22 13 12 39 39 H 1.07997 * 119.93034 * 359.97438 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 3.2561 -0.5722 1.6142 6 9 4.0920 0.1988 0.8848 7 6 3.7223 -1.2163 2.7434 8 6 2.8584 -2.0161 3.4938 9 6 3.3510 -2.7118 4.7000 10 8 2.5950 -3.4036 5.3541 11 7 4.6386 -2.5797 5.0755 12 6 5.1274 -3.2701 6.2715 13 6 6.6112 -2.9552 6.4716 14 1 7.1838 -3.0034 5.5455 15 6 6.8650 -1.6762 7.2868 16 6 6.8292 -2.5634 8.5424 17 8 5.5215 -2.7172 9.0977 18 6 7.8793 -2.1886 9.5902 19 9 9.0631 -1.8086 8.9487 20 9 7.4059 -1.1239 10.3645 21 9 8.1289 -3.2905 10.4152 22 6 7.2540 -3.7297 7.6344 23 6 1.5229 -2.1510 3.1013 24 9 0.6786 -2.9186 3.8247 25 6 1.0687 -1.4964 1.9712 26 1 -0.3933 0.4417 0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 3.5346 1.7703 0.0321 29 1 1.5616 2.4678 -1.2085 30 1 4.7537 -1.1043 3.0435 31 1 5.2419 -2.0280 4.5534 32 1 4.9979 -4.3455 6.1488 33 1 4.5636 -2.9332 7.1414 34 1 6.0473 -0.9572 7.2370 35 1 7.8391 -1.2246 7.0989 36 1 5.2487 -1.9868 9.6697 37 1 8.3344 -3.8395 7.5414 38 1 6.7503 -4.6684 7.8650 39 1 0.0375 -1.5992 1.6670 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_12360598.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:42 Heat of formation + Delta-G solvation = -280.319279 kcal Electronic energy + Delta-G solvation = -33566.052631 eV Core-core repulsion = 27891.290193 eV Total energy + Delta-G solvation = -5674.762438 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.088 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -51.26000 -50.50296 -49.96857 -48.81319 -48.71035 -41.67816 -40.96766 -39.84205 -37.78534 -36.77648 -35.35937 -33.23777 -31.50244 -30.19902 -28.24021 -27.39445 -26.83875 -24.30400 -23.93579 -23.35546 -21.87517 -20.94469 -20.18787 -19.64770 -19.53157 -19.33891 -19.14376 -18.56257 -17.90544 -17.54296 -17.45038 -17.19263 -16.82346 -16.73442 -16.35112 -16.22978 -16.07369 -15.82792 -15.79358 -15.61805 -15.48213 -15.37745 -15.17470 -15.00612 -14.89781 -14.82120 -14.62735 -14.50260 -14.16742 -14.09978 -13.75676 -13.68505 -13.32804 -13.17457 -13.00428 -12.69507 -12.57697 -12.36032 -11.83135 -11.56857 -11.36184 -11.09553 -11.04003 -10.35185 -10.20891 -9.75787 -5.14348 -0.81809 -0.36599 1.03154 1.44148 1.46995 1.54923 1.78556 1.90300 2.24707 2.29519 2.49723 2.54486 2.71723 2.73848 2.77337 3.00310 3.07220 3.12434 3.26622 3.35171 3.38398 3.45311 3.62083 3.73279 4.04783 4.08602 4.21341 4.23083 4.24999 4.30408 4.46392 4.52315 4.55676 4.64283 4.66378 4.68606 4.69362 4.94940 5.21007 5.35173 5.99789 6.23234 6.25559 7.00477 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.072 4.072 3 Si 0.688 3.312 4 C -0.091 4.091 5 C 0.074 3.926 6 F -0.118 7.118 7 C -0.085 4.085 8 C -0.150 4.150 9 C 0.559 3.441 10 O -0.512 6.512 11 N -0.724 5.724 12 C 0.131 3.869 13 C -0.114 4.114 14 H 0.100 0.900 15 C -0.155 4.155 16 C 0.062 3.938 17 O -0.507 6.507 18 C 0.433 3.567 19 F -0.175 7.175 20 F -0.183 7.183 21 F -0.174 7.174 22 C -0.108 4.108 23 C 0.162 3.838 24 F -0.105 7.105 25 C -0.125 4.125 26 H 0.383 0.617 27 H 0.130 0.870 28 H -0.226 1.226 29 H -0.256 1.256 30 H 0.151 0.849 31 H 0.399 0.601 32 H 0.077 0.923 33 H 0.094 0.906 34 H 0.094 0.906 35 H 0.109 0.891 36 H 0.392 0.608 37 H 0.113 0.887 38 H 0.100 0.900 39 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.186 3.867 -1.209 4.603 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.181 4.181 3 Si 0.586 3.414 4 C -0.093 4.093 5 C 0.055 3.945 6 F -0.097 7.097 7 C -0.105 4.105 8 C -0.154 4.154 9 C 0.345 3.655 10 O -0.387 6.387 11 N -0.377 5.377 12 C 0.009 3.991 13 C -0.132 4.132 14 H 0.118 0.882 15 C -0.192 4.192 16 C 0.018 3.982 17 O -0.314 6.314 18 C 0.378 3.622 19 F -0.157 7.157 20 F -0.164 7.164 21 F -0.156 7.156 22 C -0.146 4.146 23 C 0.141 3.859 24 F -0.083 7.083 25 C -0.144 4.144 26 H 0.231 0.769 27 H 0.147 0.853 28 H -0.149 1.149 29 H -0.181 1.181 30 H 0.168 0.832 31 H 0.235 0.765 32 H 0.095 0.905 33 H 0.112 0.888 34 H 0.112 0.888 35 H 0.128 0.872 36 H 0.243 0.757 37 H 0.132 0.868 38 H 0.119 0.881 39 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 2.246 3.082 -1.979 4.297 hybrid contribution 0.645 0.194 0.220 0.709 sum 2.892 3.276 -1.759 4.710 Atomic orbital electron populations 1.86534 1.16434 1.81400 1.49611 1.25156 0.85806 1.10701 0.96453 0.95152 0.81901 0.75782 0.88543 1.20448 0.92194 0.98155 0.98466 1.17215 0.87997 0.96464 0.92845 1.91603 1.70852 1.71547 1.75655 1.21097 1.00541 0.95495 0.93326 1.19855 0.93454 1.03275 0.98857 1.17804 0.82279 0.81365 0.84033 1.90909 1.55332 1.38551 1.53940 1.45824 1.10638 1.51712 1.29511 1.21353 0.92079 0.97848 0.87861 1.22402 0.96122 0.95911 0.98800 0.88174 1.23821 1.05067 0.97363 0.92963 1.23643 0.83170 1.01963 0.89443 1.86649 1.27315 1.49868 1.67607 1.21290 0.83173 0.74938 0.82804 1.93188 1.49728 1.91398 1.81337 1.93191 1.88018 1.57882 1.77319 1.93232 1.94772 1.53353 1.74198 1.23124 1.02560 0.97239 0.91693 1.17630 0.86632 0.91237 0.90393 1.91658 1.69138 1.71692 1.75803 1.20857 1.02489 0.97327 0.93698 0.76924 0.85292 1.14937 1.18127 0.83185 0.76528 0.90461 0.88824 0.88782 0.87246 0.75721 0.86837 0.88106 0.81906 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.03 11.63 -35.23 -0.41 0.62 16 2 C -0.07 0.14 2.96 36.00 0.11 0.25 16 3 Si 0.69 -1.53 30.81 -169.99 -5.24 -6.76 16 4 C -0.09 0.16 5.14 -104.49 -0.54 -0.37 16 5 C 0.07 -0.12 6.65 -39.49 -0.26 -0.38 16 6 F -0.12 0.07 12.80 2.25 0.03 0.10 16 7 C -0.09 0.21 9.52 -39.12 -0.37 -0.16 16 8 C -0.15 0.02 5.88 -104.92 -0.62 -0.60 16 9 C 0.56 0.81 7.77 -12.40 -0.10 0.71 16 10 O -0.51 -2.98 15.34 5.30 0.08 -2.89 16 11 N -0.72 1.43 5.51 -61.30 -0.34 1.09 16 12 C 0.13 -0.22 5.26 -4.05 -0.02 -0.24 16 13 C -0.11 0.46 3.94 -89.81 -0.35 0.10 16 14 H 0.10 -0.55 8.14 -51.93 -0.42 -0.97 16 15 C -0.15 0.63 6.91 -25.92 -0.18 0.45 16 16 C 0.06 -0.14 1.36 -89.81 -0.12 -0.27 16 17 O -0.51 0.88 11.44 -35.23 -0.40 0.48 16 18 C 0.43 -0.25 2.85 37.16 0.11 -0.14 16 19 F -0.18 0.06 15.76 2.25 0.04 0.09 16 20 F -0.18 -0.01 16.65 2.25 0.04 0.03 16 21 F -0.17 -0.22 17.18 2.25 0.04 -0.18 16 22 C -0.11 0.34 6.86 -25.91 -0.18 0.16 16 23 C 0.16 0.13 7.28 -38.97 -0.28 -0.15 16 24 F -0.11 -0.38 15.55 2.25 0.04 -0.34 16 25 C -0.13 0.17 9.20 -39.57 -0.36 -0.20 16 26 H 0.38 -2.28 8.42 45.56 0.38 -1.90 16 27 H 0.13 -0.21 7.96 -51.93 -0.41 -0.63 16 28 H -0.23 0.02 5.26 56.52 0.30 0.32 16 29 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 30 H 0.15 -0.81 6.40 -52.49 -0.34 -1.15 16 31 H 0.40 -1.97 6.50 -40.82 -0.27 -2.24 16 32 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 33 H 0.09 -0.01 6.12 -51.93 -0.32 -0.33 16 34 H 0.09 -0.40 8.10 -51.93 -0.42 -0.82 16 35 H 0.11 -0.50 7.14 -51.93 -0.37 -0.87 16 36 H 0.39 -1.73 8.42 45.56 0.38 -1.34 16 37 H 0.11 -0.47 7.88 -51.93 -0.41 -0.88 16 38 H 0.10 -0.26 8.10 -51.93 -0.42 -0.68 16 39 H 0.16 -0.42 7.06 -52.49 -0.37 -0.79 16 LS Contribution 345.00 15.07 5.20 5.20 Total: 0.00 -9.24 345.00 -6.81 -16.05 By element: Atomic # 1 Polarization: -9.93 SS G_CDS: -2.70 Total: -12.63 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: -3.17 Total: -0.84 kcal Atomic # 7 Polarization: 1.43 SS G_CDS: -0.34 Total: 1.09 kcal Atomic # 8 Polarization: -1.06 SS G_CDS: -0.73 Total: -1.80 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.18 Total: -0.30 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.24 Total: -6.76 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -9.24 -6.81 -16.05 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_12360598.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -264.273 kcal (2) G-P(sol) polarization free energy of solvation -9.237 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -273.510 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.809 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.046 kcal (6) G-S(sol) free energy of system = (1) + (5) -280.319 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds