Wall clock time and date at job start Tue Mar 9 2021 13:45:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35652 * 116.99750 * 2 1 4 4 C 1.40137 * 120.14971 * 180.02562 * 3 2 1 5 5 C 1.47534 * 120.19193 * 359.97438 * 4 3 2 6 6 O 1.21588 * 119.99738 * 0.02562 * 5 4 3 7 7 N 1.34782 * 119.99904 * 179.97438 * 5 4 3 8 8 C 1.46499 * 119.99770 * 180.02562 * 7 5 4 9 9 C 1.53001 * 109.46919 * 180.02562 * 8 7 5 10 10 H 1.08994 * 112.85480 * 45.32799 * 9 8 7 11 11 C 1.53775 * 113.61395 * 176.53236 * 9 8 7 12 12 C 1.53777 * 87.08677 * 89.11309 * 11 9 8 13 13 O 1.42907 * 113.61431 * 270.89022 * 12 11 9 14 14 C 1.52997 * 113.61826 * 140.06558 * 12 11 9 15 15 F 1.39892 * 109.46950 * 60.00303 * 14 12 11 16 16 F 1.39901 * 109.47276 * 180.02562 * 14 12 11 17 17 F 1.39900 * 109.46946 * 300.00212 * 14 12 11 18 18 C 1.53783 * 113.60967 * 274.13467 * 9 8 7 19 19 C 1.39714 * 119.61537 * 180.02562 * 4 3 2 20 20 C 1.37789 * 119.91015 * 359.97438 * 19 4 3 21 21 C 1.50692 * 119.84839 * 180.02562 * 20 19 4 22 22 O 1.42905 * 109.47269 * 300.00078 * 21 20 19 23 23 Si 1.86303 * 109.47053 * 180.02562 * 21 20 19 24 24 C 1.38551 * 120.29794 * 0.02562 * 20 19 4 25 25 C 1.38048 * 120.39010 * 359.71554 * 24 20 19 26 26 H 1.09002 * 109.47382 * 59.99849 * 1 2 3 27 27 H 1.09001 * 109.46938 * 299.99835 * 1 2 3 28 28 H 1.09004 * 109.46926 * 179.97438 * 1 2 3 29 29 H 0.96999 * 120.00130 * 0.02562 * 7 5 4 30 30 H 1.09001 * 109.47433 * 300.00027 * 8 7 5 31 31 H 1.08997 * 109.47171 * 60.00348 * 8 7 5 32 32 H 1.09002 * 113.61556 * 203.66258 * 11 9 8 33 33 H 1.09011 * 113.61391 * 334.56164 * 11 9 8 34 34 H 0.96697 * 114.00080 * 180.02562 * 13 12 11 35 35 H 1.08997 * 113.61711 * 25.43501 * 18 9 8 36 36 H 1.09004 * 113.61271 * 156.33542 * 18 9 8 37 37 H 1.08004 * 120.04563 * 179.97438 * 19 4 3 38 38 H 1.08999 * 109.47692 * 60.00203 * 21 20 19 39 39 H 0.96704 * 113.99891 * 300.00160 * 22 21 20 40 40 H 1.48509 * 109.99826 * 58.68095 * 23 21 20 41 41 H 1.48500 * 110.00121 * 179.97438 * 23 21 20 42 42 H 1.08001 * 119.80049 * 180.02562 * 24 20 19 43 43 H 1.07999 * 119.95794 * 180.30459 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4441 1.2858 -0.0005 5 6 4.2550 0.0533 -0.0005 6 8 3.7095 -1.0333 -0.0005 7 7 5.6005 0.1319 -0.0016 8 6 6.4058 -1.0919 -0.0022 9 6 7.8911 -0.7250 -0.0027 10 1 8.1331 0.0618 0.7116 11 6 8.8264 -1.9427 0.0819 12 6 8.7817 -1.9852 -1.4546 13 8 7.7134 -2.7794 -1.9745 14 6 10.1311 -2.3097 -2.0984 15 9 10.5678 -3.5639 -1.6588 16 9 9.9920 -2.3255 -3.4904 17 9 11.0675 -1.3360 -1.7347 18 6 8.4642 -0.4784 -1.4083 19 6 4.0667 2.5365 0.0000 20 6 3.3036 3.6838 0.0005 21 6 3.9766 5.0321 0.0005 22 8 4.7926 5.1573 1.1670 23 14 2.6823 6.3722 0.0021 24 6 1.9205 3.6034 0.0011 25 6 1.2924 2.3740 -0.0048 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 6.0357 0.9988 -0.0020 30 1 6.1769 -1.6779 0.8880 31 1 6.1756 -1.6779 -0.8919 32 1 9.8123 -1.7090 0.4837 33 1 8.3701 -2.8117 0.5562 34 1 7.6803 -2.8103 -2.9404 35 1 7.7156 -0.1659 -2.1363 36 1 9.3512 0.1550 -1.4132 37 1 5.1446 2.6040 0.0000 38 1 4.5982 5.1280 -0.8896 39 1 4.3044 5.0820 1.9984 40 1 1.8087 6.2331 1.1949 41 1 3.3332 7.7069 0.0028 42 1 1.3302 4.5078 0.0011 43 1 0.2138 2.3195 -0.0094 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_12496546.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:45 Heat of formation + Delta-G solvation = -237.404129 kcal Electronic energy + Delta-G solvation = -33195.638332 eV Core-core repulsion = 27987.424974 eV Total energy + Delta-G solvation = -5208.213357 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -51.20288 -48.75417 -48.65585 -41.80165 -41.25736 -39.73641 -39.25525 -37.28308 -36.63040 -35.09085 -32.81043 -31.90039 -29.97302 -28.62136 -27.31504 -27.15074 -26.24968 -24.87970 -23.52298 -22.52651 -21.43239 -20.70360 -20.08634 -19.54730 -19.47625 -19.29679 -18.46781 -18.06297 -17.38828 -17.25623 -16.88055 -16.55319 -16.29065 -16.26556 -16.17779 -15.97827 -15.84936 -15.54959 -15.40349 -15.12193 -15.11570 -14.86203 -14.81495 -14.71058 -14.59271 -14.53633 -14.39361 -13.95784 -13.62392 -13.60883 -13.44012 -13.19230 -13.02112 -12.57389 -12.45787 -12.29182 -12.23021 -12.11835 -11.74986 -11.73237 -11.26180 -10.90607 -10.55642 -10.24596 -9.94473 -9.29844 -5.05241 -0.26276 0.16937 1.19005 1.50335 1.50678 1.87580 1.89009 2.09224 2.20967 2.34501 2.56251 2.61850 2.72861 2.82233 3.22913 3.25763 3.36577 3.45809 3.48320 3.57959 3.61924 3.72282 3.95607 4.06758 4.18361 4.19094 4.21415 4.30043 4.32696 4.36069 4.48215 4.55471 4.56417 4.61403 4.64625 4.74378 4.82548 4.87261 5.03306 5.11851 5.20868 5.45651 5.49523 6.07327 6.27353 6.30222 6.55991 7.36244 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.174 4.174 5 C 0.560 3.440 6 O -0.514 6.514 7 N -0.730 5.730 8 C 0.133 3.867 9 C -0.113 4.113 10 H 0.099 0.901 11 C -0.109 4.109 12 C 0.062 3.938 13 O -0.507 6.507 14 C 0.433 3.567 15 F -0.175 7.175 16 F -0.183 7.183 17 F -0.175 7.175 18 C -0.154 4.154 19 C -0.020 4.020 20 C -0.167 4.167 21 C -0.068 4.068 22 O -0.530 6.530 23 Si 0.681 3.319 24 C -0.047 4.047 25 C -0.214 4.214 26 H 0.059 0.941 27 H 0.058 0.942 28 H 0.105 0.895 29 H 0.398 0.602 30 H 0.073 0.927 31 H 0.091 0.909 32 H 0.112 0.888 33 H 0.100 0.900 34 H 0.391 0.609 35 H 0.093 0.907 36 H 0.108 0.892 37 H 0.135 0.865 38 H 0.120 0.880 39 H 0.377 0.623 40 H -0.260 1.260 41 H -0.256 1.256 42 H 0.134 0.866 43 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.569 4.367 -0.856 5.138 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.178 4.178 5 C 0.348 3.652 6 O -0.389 6.389 7 N -0.384 5.384 8 C 0.010 3.990 9 C -0.132 4.132 10 H 0.117 0.883 11 C -0.146 4.146 12 C 0.018 3.982 13 O -0.314 6.314 14 C 0.378 3.622 15 F -0.156 7.156 16 F -0.164 7.164 17 F -0.157 7.157 18 C -0.191 4.191 19 C -0.039 4.039 20 C -0.168 4.168 21 C -0.178 4.178 22 O -0.337 6.337 23 Si 0.582 3.418 24 C -0.065 4.065 25 C -0.233 4.233 26 H 0.078 0.922 27 H 0.076 0.924 28 H 0.124 0.876 29 H 0.233 0.767 30 H 0.092 0.908 31 H 0.109 0.891 32 H 0.131 0.869 33 H 0.118 0.882 34 H 0.242 0.758 35 H 0.112 0.888 36 H 0.127 0.873 37 H 0.153 0.847 38 H 0.137 0.863 39 H 0.225 0.775 40 H -0.184 1.184 41 H -0.181 1.181 42 H 0.151 0.849 43 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.855 3.990 -0.276 4.914 hybrid contribution 0.779 0.200 0.265 0.847 sum -2.076 4.190 -0.011 4.676 Atomic orbital electron populations 1.23242 0.78171 1.04786 1.01446 1.86388 1.21212 1.25175 1.86139 1.19104 0.90960 0.85072 0.90467 1.19344 0.90901 0.93899 1.13649 1.17914 0.81751 0.88667 0.76909 1.90861 1.71474 1.28574 1.48009 1.45855 1.05969 1.09793 1.76815 1.21272 0.86979 0.86601 1.04139 1.22403 0.94394 0.98883 0.97472 0.88280 1.23115 1.01759 0.99913 0.89850 1.23704 0.82810 0.94271 0.97419 1.86654 1.46725 1.70449 1.27550 1.21305 0.89108 0.74880 0.76916 1.93227 1.91120 1.42157 1.89093 1.93188 1.95870 1.96247 1.31142 1.93186 1.68165 1.62914 1.91394 1.23854 1.03266 0.93269 0.98752 1.20962 0.99863 0.89832 0.93240 1.20064 0.93557 0.95904 1.07279 1.24931 1.02507 0.99175 0.91201 1.86595 1.36856 1.94462 1.15774 0.95082 0.79626 0.77604 0.89490 1.20989 0.93739 0.97343 0.94420 1.21234 1.00761 0.91545 1.09711 0.92229 0.92358 0.87647 0.76729 0.90849 0.89113 0.86930 0.88175 0.75810 0.88811 0.87340 0.84711 0.86265 0.77549 1.18434 1.18074 0.84860 0.84131 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.94 8.57 -40.54 -0.35 -1.29 16 3 C 0.19 0.40 6.70 -38.69 -0.26 0.14 16 4 C -0.17 -0.32 5.89 -104.84 -0.62 -0.94 16 5 C 0.56 1.90 7.76 -12.47 -0.10 1.81 16 6 O -0.51 -3.84 15.16 -16.59 -0.25 -4.09 16 7 N -0.73 0.02 5.51 -61.35 -0.34 -0.31 16 8 C 0.13 -0.01 5.27 -4.04 -0.02 -0.03 16 9 C -0.11 0.30 3.94 -89.81 -0.35 -0.06 16 10 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 11 C -0.11 0.23 6.86 -25.92 -0.18 0.05 16 12 C 0.06 -0.08 1.36 -89.67 -0.12 -0.21 16 13 O -0.51 0.38 11.42 -35.23 -0.40 -0.02 16 14 C 0.43 0.09 2.85 37.16 0.11 0.19 16 15 F -0.17 -0.34 17.18 2.25 0.04 -0.30 16 16 F -0.18 -0.14 16.65 2.25 0.04 -0.10 16 17 F -0.18 -0.08 15.77 2.25 0.04 -0.04 16 18 C -0.15 0.43 6.93 -25.78 -0.18 0.25 16 19 C -0.02 0.01 9.09 -39.19 -0.36 -0.34 16 20 C -0.17 0.21 5.39 -104.67 -0.56 -0.35 16 21 C -0.07 0.13 2.81 36.00 0.10 0.23 16 22 O -0.53 0.31 12.76 -35.23 -0.45 -0.14 16 23 Si 0.68 -1.53 29.77 -169.99 -5.06 -6.59 16 24 C -0.05 0.07 8.66 -39.54 -0.34 -0.27 16 25 C -0.21 0.13 9.03 -39.47 -0.36 -0.23 16 26 H 0.06 -0.15 7.65 -51.93 -0.40 -0.55 16 27 H 0.06 -0.14 7.67 -51.93 -0.40 -0.54 16 28 H 0.11 -0.19 8.14 -51.93 -0.42 -0.62 16 29 H 0.40 -1.04 6.50 -40.82 -0.27 -1.31 16 30 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 31 H 0.09 0.14 6.09 -51.93 -0.32 -0.18 16 32 H 0.11 -0.35 7.88 -51.93 -0.41 -0.76 16 33 H 0.10 -0.16 8.10 -51.92 -0.42 -0.58 16 34 H 0.39 -1.36 8.42 45.56 0.38 -0.97 16 35 H 0.09 -0.27 8.10 -51.93 -0.42 -0.69 16 36 H 0.11 -0.37 7.15 -51.93 -0.37 -0.74 16 37 H 0.14 -0.34 6.40 -52.48 -0.34 -0.68 16 38 H 0.12 -0.33 7.96 -51.93 -0.41 -0.75 16 39 H 0.38 -1.15 8.70 45.56 0.40 -0.76 16 40 H -0.26 0.07 7.11 56.52 0.40 0.47 16 41 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 42 H 0.13 -0.48 4.85 -52.49 -0.25 -0.74 16 43 H 0.14 -0.39 6.30 -52.49 -0.33 -0.72 16 LS Contribution 365.55 15.07 5.51 5.51 Total: 0.00 -9.86 365.55 -7.49 -17.35 By element: Atomic # 1 Polarization: -7.18 SS G_CDS: -4.02 Total: -11.20 kcal Atomic # 6 Polarization: 3.47 SS G_CDS: -2.25 Total: 1.22 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -0.34 Total: -0.31 kcal Atomic # 8 Polarization: -4.09 SS G_CDS: -1.45 Total: -5.54 kcal Atomic # 9 Polarization: -0.55 SS G_CDS: 0.11 Total: -0.44 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.06 Total: -6.59 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -9.86 -7.49 -17.35 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_12496546.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -220.054 kcal (2) G-P(sol) polarization free energy of solvation -9.856 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -229.910 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.494 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.350 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.404 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds