Wall clock time and date at job start Tue Mar 9 2021 13:45:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35652 * 116.99750 * 2 1 4 4 C 1.40137 * 120.14971 * 180.02562 * 3 2 1 5 5 C 1.47534 * 120.19193 * 359.97438 * 4 3 2 6 6 O 1.21588 * 119.99738 * 0.02562 * 5 4 3 7 7 N 1.34782 * 119.99904 * 179.97438 * 5 4 3 8 8 C 1.46499 * 119.99770 * 180.02562 * 7 5 4 9 9 C 1.53001 * 109.46919 * 180.02562 * 8 7 5 10 10 H 1.08994 * 112.85480 * 45.32799 * 9 8 7 11 11 C 1.53775 * 113.61395 * 176.53236 * 9 8 7 12 12 C 1.53777 * 87.08677 * 89.11309 * 11 9 8 13 13 O 1.42907 * 113.61431 * 270.89022 * 12 11 9 14 14 C 1.52997 * 113.61826 * 140.06558 * 12 11 9 15 15 F 1.39892 * 109.46950 * 60.00303 * 14 12 11 16 16 F 1.39901 * 109.47276 * 180.02562 * 14 12 11 17 17 F 1.39900 * 109.46946 * 300.00212 * 14 12 11 18 18 C 1.53783 * 113.60967 * 274.13467 * 9 8 7 19 19 C 1.39714 * 119.61537 * 180.02562 * 4 3 2 20 20 C 1.37789 * 119.91015 * 359.97438 * 19 4 3 21 21 C 1.50692 * 119.84839 * 180.02562 * 20 19 4 22 22 O 1.42905 * 109.47269 * 300.00078 * 21 20 19 23 23 Si 1.86303 * 109.47053 * 180.02562 * 21 20 19 24 24 C 1.38551 * 120.29794 * 0.02562 * 20 19 4 25 25 C 1.38048 * 120.39010 * 359.71554 * 24 20 19 26 26 H 1.09002 * 109.47382 * 59.99849 * 1 2 3 27 27 H 1.09001 * 109.46938 * 299.99835 * 1 2 3 28 28 H 1.09004 * 109.46926 * 179.97438 * 1 2 3 29 29 H 0.96999 * 120.00130 * 0.02562 * 7 5 4 30 30 H 1.09001 * 109.47433 * 300.00027 * 8 7 5 31 31 H 1.08997 * 109.47171 * 60.00348 * 8 7 5 32 32 H 1.09002 * 113.61556 * 203.66258 * 11 9 8 33 33 H 1.09011 * 113.61391 * 334.56164 * 11 9 8 34 34 H 0.96697 * 114.00080 * 180.02562 * 13 12 11 35 35 H 1.08997 * 113.61711 * 25.43501 * 18 9 8 36 36 H 1.09004 * 113.61271 * 156.33542 * 18 9 8 37 37 H 1.08004 * 120.04563 * 179.97438 * 19 4 3 38 38 H 1.08999 * 109.47692 * 60.00203 * 21 20 19 39 39 H 0.96704 * 113.99891 * 300.00160 * 22 21 20 40 40 H 1.48509 * 109.99826 * 58.68095 * 23 21 20 41 41 H 1.48500 * 110.00121 * 179.97438 * 23 21 20 42 42 H 1.08001 * 119.80049 * 180.02562 * 24 20 19 43 43 H 1.07999 * 119.95794 * 180.30459 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4441 1.2858 -0.0005 5 6 4.2550 0.0533 -0.0005 6 8 3.7095 -1.0333 -0.0005 7 7 5.6005 0.1319 -0.0016 8 6 6.4058 -1.0919 -0.0022 9 6 7.8911 -0.7250 -0.0027 10 1 8.1331 0.0618 0.7116 11 6 8.8264 -1.9427 0.0819 12 6 8.7817 -1.9852 -1.4546 13 8 7.7134 -2.7794 -1.9745 14 6 10.1311 -2.3097 -2.0984 15 9 10.5678 -3.5639 -1.6588 16 9 9.9920 -2.3255 -3.4904 17 9 11.0675 -1.3360 -1.7347 18 6 8.4642 -0.4784 -1.4083 19 6 4.0667 2.5365 0.0000 20 6 3.3036 3.6838 0.0005 21 6 3.9766 5.0321 0.0005 22 8 4.7926 5.1573 1.1670 23 14 2.6823 6.3722 0.0021 24 6 1.9205 3.6034 0.0011 25 6 1.2924 2.3740 -0.0048 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 6.0357 0.9988 -0.0020 30 1 6.1769 -1.6779 0.8880 31 1 6.1756 -1.6779 -0.8919 32 1 9.8123 -1.7090 0.4837 33 1 8.3701 -2.8117 0.5562 34 1 7.6803 -2.8103 -2.9404 35 1 7.7156 -0.1659 -2.1363 36 1 9.3512 0.1550 -1.4132 37 1 5.1446 2.6040 0.0000 38 1 4.5982 5.1280 -0.8896 39 1 4.3044 5.0820 1.9984 40 1 1.8087 6.2331 1.1949 41 1 3.3332 7.7069 0.0028 42 1 1.3302 4.5078 0.0011 43 1 0.2138 2.3195 -0.0094 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664666_12496546.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:44 Heat of formation + Delta-G solvation = -239.927924 kcal Electronic energy + Delta-G solvation = -33195.747771 eV Core-core repulsion = 27987.424974 eV Total energy + Delta-G solvation = -5208.322797 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -51.24130 -48.78239 -48.72732 -41.81303 -41.15146 -39.86440 -39.21005 -37.21222 -36.60849 -35.17928 -32.78416 -31.83075 -29.94228 -28.52728 -27.21227 -27.07784 -26.14424 -24.86693 -23.46411 -22.47126 -21.52230 -20.61512 -20.04922 -19.55377 -19.51102 -19.26411 -18.39698 -18.08587 -17.34453 -17.15571 -16.89270 -16.59443 -16.29188 -16.20998 -16.10521 -15.91646 -15.80469 -15.60671 -15.43329 -15.16895 -15.10419 -14.91134 -14.85193 -14.67964 -14.51822 -14.46789 -14.44738 -13.95667 -13.54820 -13.49272 -13.37634 -13.08747 -12.96103 -12.46991 -12.40545 -12.21680 -12.11258 -12.03782 -11.66801 -11.59473 -11.19199 -10.98898 -10.54463 -10.27638 -10.00156 -9.27624 -4.88086 -0.24715 0.23118 1.35276 1.53385 1.63452 1.79547 2.00916 2.06653 2.28383 2.47563 2.59606 2.69388 2.70045 2.92060 3.36252 3.40860 3.45749 3.53744 3.60408 3.66922 3.73644 3.82617 4.01767 4.18277 4.31200 4.36585 4.37512 4.42444 4.48006 4.52957 4.65759 4.68251 4.72313 4.75601 4.79014 4.87069 4.89803 4.95886 5.11422 5.15518 5.28893 5.41750 5.58400 6.29082 6.31340 6.53185 6.53450 7.23307 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.314 6.314 3 C 0.170 3.830 4 C -0.196 4.196 5 C 0.554 3.446 6 O -0.566 6.566 7 N -0.714 5.714 8 C 0.135 3.865 9 C -0.102 4.102 10 H 0.121 0.879 11 C -0.112 4.112 12 C 0.059 3.941 13 O -0.521 6.521 14 C 0.431 3.569 15 F -0.188 7.188 16 F -0.188 7.188 17 F -0.175 7.175 18 C -0.144 4.144 19 C -0.015 4.015 20 C -0.165 4.165 21 C -0.070 4.070 22 O -0.546 6.546 23 Si 0.758 3.242 24 C -0.043 4.043 25 C -0.213 4.213 26 H 0.075 0.925 27 H 0.071 0.929 28 H 0.106 0.894 29 H 0.412 0.588 30 H 0.057 0.943 31 H 0.073 0.927 32 H 0.127 0.873 33 H 0.091 0.909 34 H 0.400 0.600 35 H 0.096 0.904 36 H 0.122 0.878 37 H 0.153 0.847 38 H 0.132 0.868 39 H 0.386 0.614 40 H -0.282 1.282 41 H -0.306 1.306 42 H 0.157 0.843 43 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.461 6.221 -0.908 6.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.226 6.226 3 C 0.121 3.879 4 C -0.200 4.200 5 C 0.343 3.657 6 O -0.446 6.446 7 N -0.367 5.367 8 C 0.012 3.988 9 C -0.120 4.120 10 H 0.139 0.861 11 C -0.149 4.149 12 C 0.015 3.985 13 O -0.330 6.330 14 C 0.376 3.624 15 F -0.169 7.169 16 F -0.169 7.169 17 F -0.157 7.157 18 C -0.181 4.181 19 C -0.034 4.034 20 C -0.165 4.165 21 C -0.180 4.180 22 O -0.354 6.354 23 Si 0.664 3.336 24 C -0.060 4.060 25 C -0.231 4.231 26 H 0.094 0.906 27 H 0.090 0.910 28 H 0.124 0.876 29 H 0.250 0.750 30 H 0.075 0.925 31 H 0.092 0.908 32 H 0.145 0.855 33 H 0.109 0.891 34 H 0.253 0.747 35 H 0.115 0.885 36 H 0.140 0.860 37 H 0.170 0.830 38 H 0.150 0.850 39 H 0.236 0.764 40 H -0.209 1.209 41 H -0.235 1.235 42 H 0.174 0.826 43 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -2.722 5.854 -0.340 6.465 hybrid contribution 0.758 -0.321 0.291 0.873 sum -1.964 5.533 -0.049 5.871 Atomic orbital electron populations 1.23444 0.76561 1.05426 1.02861 1.86341 1.23181 1.26485 1.86566 1.19442 0.91416 0.85524 0.91479 1.19413 0.91096 0.94008 1.15477 1.18307 0.82643 0.88630 0.76120 1.90823 1.72564 1.30446 1.50770 1.45734 1.05085 1.10598 1.75297 1.21203 0.88708 0.86380 1.02557 1.22284 0.92218 0.99212 0.98331 0.86087 1.23222 1.02513 0.99850 0.89333 1.23863 0.81743 0.95221 0.97631 1.86640 1.46941 1.70860 1.28567 1.21590 0.89705 0.74342 0.76744 1.93198 1.91355 1.43137 1.89224 1.93174 1.95907 1.96234 1.31616 1.93178 1.68349 1.62796 1.91370 1.23857 1.03721 0.92150 0.98397 1.21111 1.00804 0.89018 0.92424 1.20178 0.93765 0.95901 1.06673 1.25076 1.02821 0.98669 0.91417 1.86575 1.37759 1.94460 1.16610 0.94225 0.77673 0.74076 0.87648 1.21276 0.93892 0.97811 0.93059 1.21462 1.01745 0.90910 1.08992 0.90635 0.90998 0.87552 0.75009 0.92467 0.90842 0.85501 0.89077 0.74744 0.88542 0.86013 0.82960 0.84995 0.76437 1.20854 1.23451 0.82631 0.82115 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 9.81 113.37 1.11 1.10 16 2 O -0.31 -2.67 8.57 -68.75 -0.59 -3.26 16 3 C 0.17 0.83 6.70 22.85 0.15 0.98 16 4 C -0.20 -0.86 5.89 -20.01 -0.12 -0.98 16 5 C 0.55 4.67 7.76 86.69 0.67 5.34 16 6 O -0.57 -10.13 15.16 16.93 0.26 -9.88 16 7 N -0.71 -0.37 5.51 -466.27 -2.57 -2.94 16 8 C 0.13 0.12 5.27 86.38 0.46 0.57 16 9 C -0.10 0.59 3.94 -10.27 -0.04 0.55 16 10 H 0.12 -1.17 8.14 -2.39 -0.02 -1.19 16 11 C -0.11 0.46 6.86 31.12 0.21 0.68 16 12 C 0.06 -0.15 1.36 -10.18 -0.01 -0.16 16 13 O -0.52 0.19 11.42 -148.98 -1.70 -1.52 16 14 C 0.43 0.27 2.85 71.98 0.21 0.48 16 15 F -0.19 -0.86 17.18 44.97 0.77 -0.09 16 16 F -0.19 -0.35 16.65 44.97 0.75 0.40 16 17 F -0.18 -0.08 15.77 44.97 0.71 0.63 16 18 C -0.14 0.93 6.93 31.21 0.22 1.14 16 19 C -0.01 0.03 9.09 22.52 0.20 0.24 16 20 C -0.16 0.66 5.39 -19.90 -0.11 0.56 16 21 C -0.07 0.39 2.81 71.23 0.20 0.59 16 22 O -0.55 1.44 12.76 -148.98 -1.90 -0.46 16 23 Si 0.76 -4.32 29.77 68.60 2.04 -2.28 16 24 C -0.04 0.20 8.66 22.30 0.19 0.40 16 25 C -0.21 0.41 9.03 22.34 0.20 0.61 16 26 H 0.08 -0.39 7.65 -2.39 -0.02 -0.41 16 27 H 0.07 -0.34 7.67 -2.39 -0.02 -0.36 16 28 H 0.11 -0.26 8.14 -2.38 -0.02 -0.27 16 29 H 0.41 -2.43 6.50 -92.71 -0.60 -3.03 16 30 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 31 H 0.07 0.36 6.09 -2.39 -0.01 0.34 16 32 H 0.13 -0.89 7.88 -2.39 -0.02 -0.91 16 33 H 0.09 -0.19 8.10 -2.38 -0.02 -0.21 16 34 H 0.40 -2.30 8.42 -74.06 -0.62 -2.92 16 35 H 0.10 -0.63 8.10 -2.39 -0.02 -0.65 16 36 H 0.12 -1.05 7.15 -2.39 -0.02 -1.07 16 37 H 0.15 -1.00 6.40 -2.91 -0.02 -1.02 16 38 H 0.13 -1.04 7.96 -2.39 -0.02 -1.06 16 39 H 0.39 -2.86 8.70 -74.05 -0.64 -3.51 16 40 H -0.28 0.53 7.11 99.48 0.71 1.24 16 41 H -0.31 -0.90 7.11 99.48 0.71 -0.19 16 42 H 0.16 -1.51 4.85 -2.91 -0.01 -1.52 16 43 H 0.16 -1.10 6.30 -2.91 -0.02 -1.12 16 Total: 0.00 -25.54 365.55 0.61 -24.93 By element: Atomic # 1 Polarization: -16.93 SS G_CDS: -0.71 Total: -17.64 kcal Atomic # 6 Polarization: 8.55 SS G_CDS: 3.55 Total: 12.10 kcal Atomic # 7 Polarization: -0.37 SS G_CDS: -2.57 Total: -2.94 kcal Atomic # 8 Polarization: -11.18 SS G_CDS: -3.93 Total: -15.11 kcal Atomic # 9 Polarization: -1.29 SS G_CDS: 2.23 Total: 0.94 kcal Atomic # 14 Polarization: -4.32 SS G_CDS: 2.04 Total: -2.28 kcal Total: -25.54 0.61 -24.93 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_12496546.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -214.997 kcal (2) G-P(sol) polarization free energy of solvation -25.540 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -240.537 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.609 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.931 kcal (6) G-S(sol) free energy of system = (1) + (5) -239.928 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds