Wall clock time and date at job start Tue Mar 9 2021 13:45:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.37806 * 119.94434 * 14.71994 * 4 2 1 6 6 C 1.39670 * 119.88424 * 179.79622 * 5 4 2 7 7 C 1.47718 * 120.12332 * 180.21171 * 6 5 4 8 8 O 1.21568 * 120.00151 * 0.24898 * 7 6 5 9 9 N 1.34776 * 120.00451 * 180.24809 * 7 6 5 10 10 C 1.46500 * 120.00252 * 179.97438 * 9 7 6 11 11 C 1.52997 * 109.47096 * 179.97438 * 10 9 7 12 12 H 1.09004 * 112.85342 * 314.66886 * 11 10 9 13 13 C 1.53780 * 113.61565 * 85.86687 * 11 10 9 14 14 C 1.54050 * 86.98804 * 89.16161 * 13 11 10 15 15 O 1.42900 * 113.61321 * 270.89148 * 14 13 11 16 16 C 1.52996 * 113.69740 * 139.99068 * 14 13 11 17 17 F 1.39902 * 109.47138 * 322.46807 * 16 14 13 18 18 F 1.39907 * 109.46990 * 82.46711 * 16 14 13 19 19 F 1.39901 * 109.47215 * 202.46532 * 16 14 13 20 20 C 1.53782 * 87.07506 * 25.43388 * 14 13 11 21 21 C 1.39636 * 119.76008 * 0.45657 * 6 5 4 22 22 C 1.37854 * 119.87683 * 359.77909 * 21 6 5 23 23 C 1.38636 * 120.12307 * 0.02562 * 22 21 6 24 24 F 1.35101 * 119.88101 * 179.97438 * 23 22 21 25 25 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 26 26 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 27 27 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 28 28 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 29 29 H 1.08001 * 120.06375 * 0.02562 * 5 4 2 30 30 H 0.97004 * 119.99871 * 0.02562 * 9 7 6 31 31 H 1.08997 * 109.47213 * 300.00418 * 10 9 7 32 32 H 1.08997 * 109.46761 * 60.00301 * 10 9 7 33 33 H 1.09000 * 113.62028 * 203.66595 * 13 11 10 34 34 H 1.09007 * 113.60975 * 334.56545 * 13 11 10 35 35 H 0.96704 * 113.99739 * 277.48742 * 15 14 13 36 36 H 1.09003 * 113.61358 * 220.02517 * 20 14 13 37 37 H 1.09000 * 113.69215 * 89.13311 * 20 14 13 38 38 H 1.07996 * 120.05862 * 179.79016 * 21 6 5 39 39 H 1.08002 * 119.93994 * 180.02562 * 22 21 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 1.0718 -1.4901 1.9736 6 6 1.5397 -2.1516 3.1112 7 6 0.6240 -2.9923 3.9092 8 8 -0.5381 -3.1133 3.5735 9 7 1.0769 -3.6255 5.0094 10 6 0.1686 -4.4589 5.8010 11 6 0.9286 -5.0582 6.9859 12 1 1.9007 -5.4630 6.7043 13 6 0.9781 -4.1365 8.2159 14 6 -0.3417 -4.7947 8.6610 15 8 -1.5069 -4.1405 8.1546 16 6 -0.4179 -5.0639 10.1651 17 9 0.8387 -5.4651 10.6313 18 9 -0.8104 -3.8963 10.8285 19 9 -1.3516 -6.0762 10.4110 20 6 0.0835 -6.0212 7.8365 21 6 2.8750 -2.0111 3.4946 22 6 3.7251 -1.2248 2.7466 23 6 3.2564 -0.5738 1.6159 24 9 4.0936 0.1960 0.8868 25 1 -0.3934 0.4418 -0.7650 26 1 1.7923 -0.5137 -0.8901 27 1 1.5616 2.4678 1.2086 28 1 3.5346 1.7703 -0.0322 29 1 0.0389 -1.5926 1.6748 30 1 2.0041 -3.5288 5.2775 31 1 -0.6564 -3.8489 6.1690 32 1 -0.2236 -5.2623 5.1775 33 1 1.8153 -4.3425 8.8826 34 1 0.8797 -3.0784 7.9727 35 1 -1.7793 -3.3683 8.6690 36 1 -0.7366 -6.4837 7.2873 37 1 0.6765 -6.7426 8.3985 38 1 3.2411 -2.5176 4.3754 39 1 4.7582 -1.1158 3.0420 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_12496548.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:48 Heat of formation + Delta-G solvation = -240.455822 kcal Electronic energy + Delta-G solvation = -30856.626425 eV Core-core repulsion = 25653.046572 eV Total energy + Delta-G solvation = -5203.579853 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.097 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -51.25049 -50.47657 -48.80430 -48.70150 -41.67108 -40.99026 -39.50989 -37.69506 -36.74873 -35.31083 -33.06682 -32.11411 -30.03967 -27.52172 -27.36137 -26.87459 -24.67950 -23.47662 -23.28897 -21.48843 -20.75545 -20.14011 -19.53779 -19.46474 -19.22895 -18.81407 -18.31530 -17.65659 -17.42468 -17.16869 -16.63702 -16.47100 -16.39896 -16.09291 -15.81699 -15.62156 -15.48930 -15.37330 -15.16691 -15.16366 -14.96266 -14.88006 -14.81666 -14.69292 -14.58404 -14.33804 -14.12963 -13.68653 -13.60570 -13.31155 -13.06261 -12.76536 -12.65410 -12.36088 -12.21968 -11.81460 -11.60368 -11.34901 -11.03747 -10.94783 -10.22492 -10.05011 -9.70483 -4.97321 -0.55753 -0.03670 1.20900 1.45184 1.63715 1.68051 1.92169 1.99645 2.27258 2.50709 2.55667 2.57627 2.75256 2.80940 3.02353 3.14508 3.28535 3.33795 3.39693 3.51292 3.63739 3.71245 3.88441 4.07924 4.11717 4.22816 4.26073 4.26781 4.46001 4.48216 4.56956 4.65767 4.70186 4.72458 4.77457 4.96661 5.03159 5.07405 5.28396 5.53518 6.01098 6.34620 6.50713 7.11896 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.069 4.069 3 Si 0.676 3.324 4 C -0.118 4.118 5 C -0.005 4.005 6 C -0.144 4.144 7 C 0.561 3.439 8 O -0.525 6.525 9 N -0.726 5.726 10 C 0.130 3.870 11 C -0.113 4.113 12 H 0.100 0.900 13 C -0.155 4.155 14 C 0.062 3.938 15 O -0.507 6.507 16 C 0.433 3.567 17 F -0.175 7.175 18 F -0.183 7.183 19 F -0.174 7.174 20 C -0.108 4.108 21 C -0.061 4.061 22 C -0.151 4.151 23 C 0.107 3.893 24 F -0.117 7.117 25 H 0.389 0.611 26 H 0.085 0.915 27 H -0.258 1.258 28 H -0.229 1.229 29 H 0.159 0.841 30 H 0.399 0.601 31 H 0.093 0.907 32 H 0.076 0.924 33 H 0.109 0.891 34 H 0.093 0.907 35 H 0.392 0.608 36 H 0.100 0.900 37 H 0.113 0.887 38 H 0.139 0.861 39 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.883 0.673 -1.549 4.235 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.179 4.179 3 Si 0.575 3.425 4 C -0.119 4.119 5 C -0.024 4.024 6 C -0.147 4.147 7 C 0.348 3.652 8 O -0.401 6.401 9 N -0.379 5.379 10 C 0.008 3.992 11 C -0.132 4.132 12 H 0.118 0.882 13 C -0.192 4.192 14 C 0.018 3.982 15 O -0.314 6.314 16 C 0.378 3.622 17 F -0.157 7.157 18 F -0.164 7.164 19 F -0.156 7.156 20 C -0.146 4.146 21 C -0.080 4.080 22 C -0.170 4.170 23 C 0.088 3.912 24 F -0.096 7.096 25 H 0.238 0.762 26 H 0.102 0.898 27 H -0.182 1.182 28 H -0.154 1.154 29 H 0.177 0.823 30 H 0.234 0.766 31 H 0.111 0.889 32 H 0.094 0.906 33 H 0.127 0.873 34 H 0.112 0.888 35 H 0.243 0.757 36 H 0.119 0.881 37 H 0.132 0.868 38 H 0.156 0.844 39 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 3.647 0.409 -1.223 3.868 hybrid contribution 0.632 -0.034 1.139 1.303 sum 4.278 0.375 -0.083 4.295 Atomic orbital electron populations 1.86399 1.16611 1.81957 1.50113 1.24544 0.86325 1.10460 0.96539 0.95895 0.80970 0.76133 0.89468 1.19424 0.92034 1.01075 0.99331 1.20999 1.00954 0.90040 0.90423 1.20046 0.94204 1.02174 0.98299 1.18056 0.87342 0.79447 0.80365 1.90839 1.17559 1.62366 1.69359 1.45848 1.14358 1.50234 1.27456 1.21338 0.92422 0.94957 0.90525 1.22402 1.00399 0.96654 0.93739 0.88217 1.23862 0.95847 1.01303 0.98200 1.23696 0.89341 0.99355 0.85826 1.86649 1.42878 1.47302 1.54586 1.21294 0.73987 0.74613 0.92307 1.93186 1.41335 1.90782 1.90351 1.93192 1.90917 1.48800 1.83518 1.93232 1.65929 1.60900 1.95493 1.23113 1.00427 0.94197 0.96867 1.21168 0.91943 0.96205 0.98678 1.21042 1.01804 0.99399 0.94758 1.17767 0.87488 0.93966 0.91987 1.91498 1.70819 1.71393 1.75874 0.76236 0.89761 1.18241 1.15372 0.82317 0.76569 0.88923 0.90555 0.87284 0.88837 0.75742 0.88116 0.86848 0.84368 0.83455 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.01 11.47 -35.23 -0.40 -0.40 16 2 C -0.07 -0.01 2.96 36.00 0.11 0.10 16 3 Si 0.68 -0.29 30.73 -169.99 -5.22 -5.52 16 4 C -0.12 -0.24 5.15 -104.62 -0.54 -0.78 16 5 C -0.01 -0.01 8.90 -39.21 -0.35 -0.36 16 6 C -0.14 -0.20 5.87 -104.97 -0.62 -0.81 16 7 C 0.56 1.33 7.77 -12.39 -0.10 1.23 16 8 O -0.52 -3.40 16.34 5.31 0.09 -3.31 16 9 N -0.73 0.85 5.51 -61.29 -0.34 0.51 16 10 C 0.13 -0.13 5.27 -4.04 -0.02 -0.15 16 11 C -0.11 0.40 3.93 -89.81 -0.35 0.05 16 12 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 13 C -0.15 0.54 6.93 -25.78 -0.18 0.37 16 14 C 0.06 -0.12 1.36 -89.67 -0.12 -0.24 16 15 O -0.51 0.62 11.42 -35.23 -0.40 0.22 16 16 C 0.43 -0.09 2.85 37.16 0.11 0.02 16 17 F -0.18 0.00 15.77 2.25 0.04 0.03 16 18 F -0.18 -0.08 16.65 2.25 0.04 -0.04 16 19 F -0.17 -0.27 17.18 2.25 0.04 -0.24 16 20 C -0.11 0.30 6.86 -25.92 -0.18 0.12 16 21 C -0.06 0.08 9.54 -39.20 -0.37 -0.29 16 22 C -0.15 0.08 10.01 -39.58 -0.40 -0.32 16 23 C 0.11 0.17 6.67 -39.27 -0.26 -0.09 16 24 F -0.12 -0.28 12.86 2.25 0.03 -0.25 16 25 H 0.39 -1.95 8.74 45.56 0.40 -1.55 16 26 H 0.08 -0.13 7.96 -51.93 -0.41 -0.54 16 27 H -0.26 -0.88 7.11 56.52 0.40 -0.48 16 28 H -0.23 -0.42 5.40 56.52 0.30 -0.11 16 29 H 0.16 0.63 6.71 -52.49 -0.35 0.28 16 30 H 0.40 -1.65 6.50 -40.82 -0.27 -1.92 16 31 H 0.09 0.06 6.09 -51.93 -0.32 -0.25 16 32 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.11 -0.45 7.15 -51.93 -0.37 -0.82 16 34 H 0.09 -0.33 8.10 -51.93 -0.42 -0.75 16 35 H 0.39 -1.51 8.42 45.56 0.38 -1.13 16 36 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 37 H 0.11 -0.43 7.89 -51.93 -0.41 -0.84 16 38 H 0.14 -0.67 6.40 -52.49 -0.34 -1.01 16 39 H 0.15 -0.41 8.06 -52.49 -0.42 -0.83 16 LS Contribution 340.92 15.07 5.14 5.14 Total: 0.00 -9.61 340.92 -7.36 -16.97 By element: Atomic # 1 Polarization: -8.86 SS G_CDS: -3.09 Total: -11.94 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -3.27 Total: -1.17 kcal Atomic # 7 Polarization: 0.85 SS G_CDS: -0.34 Total: 0.51 kcal Atomic # 8 Polarization: -2.77 SS G_CDS: -0.72 Total: -3.49 kcal Atomic # 9 Polarization: -0.63 SS G_CDS: 0.14 Total: -0.49 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: -5.22 Total: -5.52 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -9.61 -7.36 -16.97 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_12496548.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -223.486 kcal (2) G-P(sol) polarization free energy of solvation -9.608 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -233.095 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.361 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.970 kcal (6) G-S(sol) free energy of system = (1) + (5) -240.456 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds