Wall clock time and date at job start Tue Mar 9 2021 13:45:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.37806 * 119.94434 * 14.71994 * 4 2 1 6 6 C 1.39670 * 119.88424 * 179.79622 * 5 4 2 7 7 C 1.47718 * 120.12332 * 180.21171 * 6 5 4 8 8 O 1.21568 * 120.00151 * 0.24898 * 7 6 5 9 9 N 1.34776 * 120.00451 * 180.24809 * 7 6 5 10 10 C 1.46500 * 120.00252 * 179.97438 * 9 7 6 11 11 C 1.52997 * 109.47096 * 179.97438 * 10 9 7 12 12 H 1.09004 * 112.85342 * 314.66886 * 11 10 9 13 13 C 1.53780 * 113.61565 * 85.86687 * 11 10 9 14 14 C 1.54050 * 86.98804 * 89.16161 * 13 11 10 15 15 O 1.42900 * 113.61321 * 270.89148 * 14 13 11 16 16 C 1.52996 * 113.69740 * 139.99068 * 14 13 11 17 17 F 1.39902 * 109.47138 * 322.46807 * 16 14 13 18 18 F 1.39907 * 109.46990 * 82.46711 * 16 14 13 19 19 F 1.39901 * 109.47215 * 202.46532 * 16 14 13 20 20 C 1.53782 * 87.07506 * 25.43388 * 14 13 11 21 21 C 1.39636 * 119.76008 * 0.45657 * 6 5 4 22 22 C 1.37854 * 119.87683 * 359.77909 * 21 6 5 23 23 C 1.38636 * 120.12307 * 0.02562 * 22 21 6 24 24 F 1.35101 * 119.88101 * 179.97438 * 23 22 21 25 25 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 26 26 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 27 27 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 28 28 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 29 29 H 1.08001 * 120.06375 * 0.02562 * 5 4 2 30 30 H 0.97004 * 119.99871 * 0.02562 * 9 7 6 31 31 H 1.08997 * 109.47213 * 300.00418 * 10 9 7 32 32 H 1.08997 * 109.46761 * 60.00301 * 10 9 7 33 33 H 1.09000 * 113.62028 * 203.66595 * 13 11 10 34 34 H 1.09007 * 113.60975 * 334.56545 * 13 11 10 35 35 H 0.96704 * 113.99739 * 277.48742 * 15 14 13 36 36 H 1.09003 * 113.61358 * 220.02517 * 20 14 13 37 37 H 1.09000 * 113.69215 * 89.13311 * 20 14 13 38 38 H 1.07996 * 120.05862 * 179.79016 * 21 6 5 39 39 H 1.08002 * 119.93994 * 180.02562 * 22 21 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 1.0718 -1.4901 1.9736 6 6 1.5397 -2.1516 3.1112 7 6 0.6240 -2.9923 3.9092 8 8 -0.5381 -3.1133 3.5735 9 7 1.0769 -3.6255 5.0094 10 6 0.1686 -4.4589 5.8010 11 6 0.9286 -5.0582 6.9859 12 1 1.9007 -5.4630 6.7043 13 6 0.9781 -4.1365 8.2159 14 6 -0.3417 -4.7947 8.6610 15 8 -1.5069 -4.1405 8.1546 16 6 -0.4179 -5.0639 10.1651 17 9 0.8387 -5.4651 10.6313 18 9 -0.8104 -3.8963 10.8285 19 9 -1.3516 -6.0762 10.4110 20 6 0.0835 -6.0212 7.8365 21 6 2.8750 -2.0111 3.4946 22 6 3.7251 -1.2248 2.7466 23 6 3.2564 -0.5738 1.6159 24 9 4.0936 0.1960 0.8868 25 1 -0.3934 0.4418 -0.7650 26 1 1.7923 -0.5137 -0.8901 27 1 1.5616 2.4678 1.2086 28 1 3.5346 1.7703 -0.0322 29 1 0.0389 -1.5926 1.6748 30 1 2.0041 -3.5288 5.2775 31 1 -0.6564 -3.8489 6.1690 32 1 -0.2236 -5.2623 5.1775 33 1 1.8153 -4.3425 8.8826 34 1 0.8797 -3.0784 7.9727 35 1 -1.7793 -3.3683 8.6690 36 1 -0.7366 -6.4837 7.2873 37 1 0.6765 -6.7426 8.3985 38 1 3.2411 -2.5176 4.3754 39 1 4.7582 -1.1158 3.0420 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664666_12496548.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:47 Heat of formation + Delta-G solvation = -243.190018 kcal Electronic energy + Delta-G solvation = -30856.744989 eV Core-core repulsion = 25653.046572 eV Total energy + Delta-G solvation = -5203.698417 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.097 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -51.24825 -50.57814 -48.79283 -48.73431 -41.64857 -40.91931 -39.59164 -37.67735 -36.68353 -35.32903 -33.06921 -32.15943 -29.96855 -27.49887 -27.11192 -26.85793 -24.71583 -23.37724 -23.30069 -21.55995 -20.61706 -20.05424 -19.53694 -19.44528 -19.24163 -18.82132 -18.33974 -17.68260 -17.37685 -17.12368 -16.70967 -16.52092 -16.32311 -16.05412 -15.83273 -15.63655 -15.48213 -15.36552 -15.18943 -15.17751 -14.95937 -14.90287 -14.85772 -14.70035 -14.49543 -14.32096 -14.06275 -13.76351 -13.47885 -13.30001 -12.98249 -12.81456 -12.47532 -12.25147 -12.11838 -11.74814 -11.60796 -11.31834 -11.09095 -10.95760 -10.31799 -10.07225 -9.71348 -4.97744 -0.62256 -0.05557 1.20640 1.52844 1.55097 1.62741 1.91340 1.95018 2.45997 2.50629 2.59152 2.68730 2.82382 2.91102 3.04965 3.33299 3.39064 3.40325 3.51102 3.60138 3.70894 3.78376 3.94698 4.12371 4.30848 4.36052 4.46400 4.49444 4.53251 4.70640 4.73292 4.77370 4.79906 4.85887 4.88483 4.96978 5.00666 5.11421 5.31042 5.50746 6.27148 6.38320 6.80534 7.05916 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.078 4.078 3 Si 0.766 3.234 4 C -0.135 4.135 5 C -0.027 4.027 6 C -0.152 4.152 7 C 0.558 3.442 8 O -0.577 6.577 9 N -0.704 5.704 10 C 0.131 3.869 11 C -0.100 4.100 12 H 0.127 0.873 13 C -0.145 4.145 14 C 0.057 3.943 15 O -0.522 6.522 16 C 0.430 3.570 17 F -0.175 7.175 18 F -0.189 7.189 19 F -0.188 7.188 20 C -0.112 4.112 21 C -0.046 4.046 22 C -0.145 4.145 23 C 0.089 3.911 24 F -0.124 7.124 25 H 0.408 0.592 26 H 0.102 0.898 27 H -0.313 1.313 28 H -0.257 1.257 29 H 0.136 0.864 30 H 0.417 0.583 31 H 0.074 0.926 32 H 0.063 0.937 33 H 0.123 0.877 34 H 0.096 0.904 35 H 0.400 0.600 36 H 0.091 0.909 37 H 0.128 0.872 38 H 0.181 0.819 39 H 0.177 0.823 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.031 0.267 -1.075 6.132 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.187 4.187 3 Si 0.671 3.329 4 C -0.136 4.136 5 C -0.046 4.046 6 C -0.156 4.156 7 C 0.346 3.654 8 O -0.457 6.457 9 N -0.357 5.357 10 C 0.007 3.993 11 C -0.119 4.119 12 H 0.145 0.855 13 C -0.182 4.182 14 C 0.013 3.987 15 O -0.331 6.331 16 C 0.375 3.625 17 F -0.157 7.157 18 F -0.170 7.170 19 F -0.170 7.170 20 C -0.150 4.150 21 C -0.064 4.064 22 C -0.163 4.163 23 C 0.070 3.930 24 F -0.103 7.103 25 H 0.260 0.740 26 H 0.120 0.880 27 H -0.242 1.242 28 H -0.184 1.184 29 H 0.154 0.846 30 H 0.256 0.744 31 H 0.093 0.907 32 H 0.081 0.919 33 H 0.141 0.859 34 H 0.115 0.885 35 H 0.252 0.748 36 H 0.109 0.891 37 H 0.146 0.854 38 H 0.198 0.802 39 H 0.194 0.806 Dipole moment (debyes) X Y Z Total from point charges 5.818 -0.008 -0.755 5.867 hybrid contribution -0.055 0.098 1.073 1.079 sum 5.764 0.090 0.318 5.773 Atomic orbital electron populations 1.86377 1.16706 1.82489 1.51675 1.24728 0.86488 1.10844 0.96630 0.94978 0.77819 0.73683 0.86445 1.19667 0.92481 1.01358 1.00107 1.20891 1.00272 0.91623 0.91807 1.20083 0.95369 1.02176 0.97953 1.18292 0.86776 0.79419 0.80928 1.90812 1.19749 1.64316 1.70860 1.45684 1.15200 1.48805 1.26038 1.21294 0.92539 0.94250 0.91176 1.22286 1.00913 0.96225 0.92460 0.85518 1.23875 0.95018 1.01353 0.97950 1.23906 0.89954 1.00275 0.84529 1.86636 1.43527 1.47891 1.55018 1.21632 0.73592 0.74044 0.93216 1.93178 1.41224 1.90779 1.90492 1.93175 1.90994 1.49063 1.83806 1.93201 1.66541 1.61560 1.95666 1.23230 1.00522 0.94308 0.96892 1.21548 0.90253 0.95227 0.99359 1.21436 1.03198 0.98134 0.93542 1.18049 0.87346 0.94691 0.92956 1.91483 1.70886 1.71721 1.76218 0.73967 0.88027 1.24182 1.18378 0.84600 0.74439 0.90742 0.91912 0.85912 0.88533 0.74762 0.89067 0.85437 0.80157 0.80600 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.76 11.47 -148.98 -1.71 -2.47 16 2 C -0.08 -0.08 2.96 71.23 0.21 0.13 16 3 Si 0.77 0.01 30.73 68.60 2.11 2.12 16 4 C -0.14 -0.70 5.15 -19.86 -0.10 -0.80 16 5 C -0.03 -0.20 8.90 22.51 0.20 0.00 16 6 C -0.15 -0.47 5.87 -20.09 -0.12 -0.58 16 7 C 0.56 3.07 7.77 86.75 0.67 3.74 16 8 O -0.58 -8.89 16.34 -3.93 -0.06 -8.96 16 9 N -0.70 2.22 5.51 -466.11 -2.57 -0.35 16 10 C 0.13 -0.27 5.27 86.38 0.46 0.18 16 11 C -0.10 0.86 3.93 -10.27 -0.04 0.82 16 12 H 0.13 -1.70 8.14 -2.38 -0.02 -1.72 16 13 C -0.14 1.25 6.93 31.21 0.22 1.47 16 14 C 0.06 -0.23 1.36 -10.18 -0.01 -0.24 16 15 O -0.52 0.87 11.42 -148.98 -1.70 -0.83 16 16 C 0.43 -0.19 2.85 71.98 0.21 0.01 16 17 F -0.18 0.13 15.77 44.97 0.71 0.84 16 18 F -0.19 -0.21 16.65 44.97 0.75 0.54 16 19 F -0.19 -0.70 17.18 44.97 0.77 0.07 16 20 C -0.11 0.69 6.86 31.12 0.21 0.90 16 21 C -0.05 0.21 9.54 22.52 0.21 0.42 16 22 C -0.14 0.40 10.01 22.27 0.22 0.63 16 23 C 0.09 0.28 6.67 22.47 0.15 0.43 16 24 F -0.12 -0.60 12.86 44.97 0.58 -0.02 16 25 H 0.41 -3.82 8.74 -74.05 -0.65 -4.47 16 26 H 0.10 -0.29 7.96 -2.38 -0.02 -0.31 16 27 H -0.31 -2.88 7.11 99.48 0.71 -2.17 16 28 H -0.26 -1.11 5.40 99.48 0.54 -0.58 16 29 H 0.14 1.55 6.71 -2.91 -0.02 1.53 16 30 H 0.42 -4.56 6.50 -92.71 -0.60 -5.16 16 31 H 0.07 0.17 6.09 -2.39 -0.01 0.16 16 32 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 33 H 0.12 -1.33 7.15 -2.39 -0.02 -1.35 16 34 H 0.10 -0.84 8.10 -2.38 -0.02 -0.86 16 35 H 0.40 -2.69 8.42 -74.05 -0.62 -3.31 16 36 H 0.09 -0.36 8.10 -2.39 -0.02 -0.38 16 37 H 0.13 -1.14 7.89 -2.39 -0.02 -1.16 16 38 H 0.18 -2.48 6.40 -2.91 -0.02 -2.50 16 39 H 0.18 -1.53 8.06 -2.91 -0.02 -1.55 16 Total: 0.00 -26.26 340.92 0.53 -25.73 By element: Atomic # 1 Polarization: -22.94 SS G_CDS: -0.84 Total: -23.78 kcal Atomic # 6 Polarization: 4.62 SS G_CDS: 2.49 Total: 7.11 kcal Atomic # 7 Polarization: 2.22 SS G_CDS: -2.57 Total: -0.35 kcal Atomic # 8 Polarization: -8.79 SS G_CDS: -3.47 Total: -12.26 kcal Atomic # 9 Polarization: -1.38 SS G_CDS: 2.81 Total: 1.43 kcal Atomic # 14 Polarization: 0.01 SS G_CDS: 2.11 Total: 2.12 kcal Total: -26.26 0.53 -25.73 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_12496548.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -217.459 kcal (2) G-P(sol) polarization free energy of solvation -26.256 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -243.715 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.525 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.731 kcal (6) G-S(sol) free energy of system = (1) + (5) -243.190 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds