Wall clock time and date at job start Tue Mar 9 2021 13:45:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86302 * 109.47136 * 2 1 4 4 C 1.50701 * 109.46656 * 119.99506 * 2 1 3 5 5 C 1.35088 * 126.07875 * 255.34982 * 4 2 1 6 6 N 1.35032 * 107.98219 * 180.12944 * 5 4 2 7 7 C 1.46503 * 125.93242 * 179.84108 * 6 5 4 8 8 C 1.50692 * 109.47453 * 124.71392 * 7 6 5 9 9 O 1.21291 * 119.99974 * 0.02562 * 8 7 6 10 10 N 1.34780 * 120.00323 * 179.97438 * 8 7 6 11 11 C 1.46500 * 120.00219 * 180.02562 * 10 8 7 12 12 C 1.52998 * 109.46940 * 180.02562 * 11 10 8 13 13 H 1.09004 * 112.91142 * 43.74856 * 12 11 10 14 14 C 1.53784 * 113.61395 * 174.99914 * 12 11 10 15 15 C 1.53787 * 87.07923 * 89.11282 * 14 12 11 16 16 O 1.42896 * 113.61731 * 270.79808 * 15 14 12 17 17 C 1.53000 * 113.60890 * 139.98364 * 15 14 12 18 18 F 1.39891 * 109.47547 * 59.99915 * 17 15 14 19 19 F 1.39901 * 109.46800 * 179.97438 * 17 15 14 20 20 F 1.39899 * 109.47157 * 299.99702 * 17 15 14 21 21 C 1.53779 * 113.61251 * 272.49443 * 12 11 10 22 22 N 1.40074 * 108.13727 * 359.57316 * 6 5 4 23 23 C 1.31620 * 108.11167 * 0.26573 * 22 6 5 24 24 C 1.48412 * 126.03929 * 179.97438 * 23 22 6 25 25 C 1.39330 * 120.11747 * 144.75203 * 24 23 22 26 26 C 1.38025 * 119.87371 * 179.71931 * 25 24 23 27 27 C 1.38313 * 120.12414 * 0.55056 * 26 25 24 28 28 C 1.38324 * 120.23819 * 359.72293 * 27 26 25 29 29 C 1.38025 * 120.12175 * 359.97438 * 28 27 26 30 30 H 0.96698 * 113.99690 * 300.00855 * 1 2 3 31 31 H 1.08995 * 109.47160 * 239.99187 * 2 1 3 32 32 H 1.48502 * 109.99434 * 299.99406 * 3 2 1 33 33 H 1.48493 * 110.00047 * 61.31597 * 3 2 1 34 34 H 1.08002 * 126.00721 * 359.97438 * 5 4 2 35 35 H 1.08997 * 109.47253 * 4.71088 * 7 6 5 36 36 H 1.09002 * 109.46865 * 244.71516 * 7 6 5 37 37 H 0.97000 * 119.99552 * 0.02562 * 10 8 7 38 38 H 1.08997 * 109.47243 * 59.99960 * 11 10 8 39 39 H 1.09002 * 109.47186 * 300.00198 * 11 10 8 40 40 H 1.09004 * 113.61451 * 334.56768 * 14 12 11 41 41 H 1.08994 * 113.61477 * 203.66069 * 14 12 11 42 42 H 0.96696 * 114.00577 * 179.97438 * 16 15 14 43 43 H 1.09006 * 113.61307 * 156.33907 * 21 12 11 44 44 H 1.08999 * 113.69146 * 25.44393 * 21 12 11 45 45 H 1.07993 * 120.06293 * 359.96805 * 25 24 23 46 46 H 1.08003 * 119.93585 * 180.27547 * 26 25 24 47 47 H 1.07995 * 119.88418 * 179.69922 * 27 26 25 48 48 H 1.08005 * 119.93691 * 180.02562 * 28 27 26 49 49 H 1.07998 * 120.06165 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.4567 -0.1245 2.3285 6 7 2.7871 -1.0987 3.2032 7 6 3.3914 -0.9005 4.5230 8 6 2.5373 -1.5654 5.5715 9 8 1.5238 -2.1480 5.2482 10 7 2.9002 -1.5136 6.8685 11 6 2.0702 -2.1605 7.8878 12 6 2.7013 -1.9534 9.2661 13 1 3.0556 -0.9343 9.4217 14 6 1.8431 -2.4906 10.4236 15 6 2.5686 -3.8333 10.2341 16 8 1.9306 -4.7013 9.2952 17 6 2.9156 -4.5333 11.5496 18 9 1.7412 -4.7906 12.2649 19 9 3.5692 -5.7399 11.2775 20 9 3.7533 -3.7096 12.3093 21 6 3.7357 -3.0288 9.6378 22 7 2.4461 -2.3315 2.6320 23 6 1.9299 -2.1027 1.4431 24 6 1.4345 -3.1304 0.4938 25 6 0.3292 -2.8635 -0.3113 26 6 -0.1237 -3.8208 -1.1965 27 6 0.5105 -5.0473 -1.2770 28 6 1.6047 -5.3196 -0.4759 29 6 2.0699 -4.3673 0.4083 30 1 -0.3933 0.4418 0.7650 31 1 1.7924 -0.5139 -0.8899 32 1 1.5616 2.4677 -1.2086 33 1 1.5879 2.4586 1.2241 34 1 2.5914 0.9365 2.4791 35 1 3.4610 0.1665 4.7342 36 1 4.3891 -1.3392 4.5353 37 1 3.7109 -1.0480 7.1270 38 1 2.0007 -3.2275 7.6762 39 1 1.0724 -1.7220 7.8758 40 1 0.7783 -2.5336 10.1943 41 1 2.0521 -2.0126 11.3805 42 1 2.3825 -5.5472 9.1715 43 1 4.4621 -2.6978 10.3801 44 1 4.1997 -3.5069 8.7752 45 1 -0.1697 -1.9080 -0.2458 46 1 -0.9777 -3.6133 -1.8243 47 1 0.1498 -5.7953 -1.9675 48 1 2.0966 -6.2788 -0.5431 49 1 2.9241 -4.5811 1.0336 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_12622748.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:45:51 Heat of formation + Delta-G solvation = -117.268936 kcal Electronic energy + Delta-G solvation = -39139.038407 eV Core-core repulsion = 33428.111213 eV Total energy + Delta-G solvation = -5710.927194 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.144 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -51.27058 -48.82376 -48.71932 -42.43945 -41.54907 -40.38131 -39.54790 -37.85419 -36.78068 -35.28992 -34.73353 -32.28250 -31.74564 -31.32960 -30.32016 -28.76451 -27.40883 -26.96129 -25.77973 -24.03492 -23.50511 -23.27236 -21.89260 -21.46488 -20.99308 -20.67416 -20.16337 -19.55471 -19.46320 -18.76001 -18.34160 -17.68591 -17.51037 -17.28818 -16.90948 -16.63542 -16.40108 -16.25421 -16.10967 -15.70055 -15.65426 -15.54235 -15.42300 -15.38568 -15.21891 -15.18152 -14.91087 -14.87403 -14.73970 -14.62453 -14.40247 -14.27495 -14.11363 -13.99636 -13.75611 -13.67805 -13.53724 -13.32919 -13.09010 -12.68293 -12.49868 -12.37625 -12.27234 -11.96630 -11.84324 -11.63489 -11.49118 -11.39329 -11.17632 -10.56180 -10.38371 -10.21441 -9.66149 -9.61277 -9.13498 -4.95882 0.29076 0.72507 0.82809 1.21832 1.35128 1.43282 1.44276 1.56944 1.86625 1.93700 2.00010 2.24912 2.49001 2.53582 2.73008 3.07753 3.12511 3.23784 3.33155 3.37046 3.44991 3.46843 3.61780 3.64155 3.74320 3.82434 4.06863 4.15485 4.19763 4.23928 4.25671 4.29320 4.45190 4.46666 4.52540 4.53067 4.61127 4.65853 4.67259 4.79355 4.90362 4.94415 4.96760 5.18757 5.21869 5.38982 5.47619 5.79129 5.81698 5.85536 5.87749 5.99341 6.25713 6.27088 6.50598 6.72489 7.04162 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.036 4.036 3 Si 0.686 3.314 4 C -0.248 4.248 5 C 0.061 3.939 6 N -0.358 5.358 7 C 0.117 3.883 8 C 0.497 3.503 9 O -0.501 6.501 10 N -0.730 5.730 11 C 0.133 3.867 12 C -0.112 4.112 13 H 0.100 0.900 14 C -0.109 4.109 15 C 0.061 3.939 16 O -0.507 6.507 17 C 0.432 3.568 18 F -0.174 7.174 19 F -0.183 7.183 20 F -0.175 7.175 21 C -0.154 4.154 22 N -0.249 5.249 23 C 0.134 3.866 24 C -0.021 4.021 25 C -0.099 4.099 26 C -0.125 4.125 27 C -0.112 4.112 28 C -0.127 4.127 29 C -0.091 4.091 30 H 0.375 0.625 31 H 0.116 0.884 32 H -0.256 1.256 33 H -0.260 1.260 34 H 0.178 0.822 35 H 0.128 0.872 36 H 0.119 0.881 37 H 0.401 0.599 38 H 0.091 0.909 39 H 0.073 0.927 40 H 0.099 0.901 41 H 0.113 0.887 42 H 0.392 0.608 43 H 0.109 0.891 44 H 0.093 0.907 45 H 0.153 0.847 46 H 0.124 0.876 47 H 0.122 0.878 48 H 0.124 0.876 49 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.340 5.227 1.929 8.440 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.147 4.147 3 Si 0.588 3.412 4 C -0.259 4.259 5 C -0.084 4.084 6 N -0.140 5.140 7 C -0.009 4.009 8 C 0.280 3.720 9 O -0.374 6.374 10 N -0.384 5.384 11 C 0.010 3.990 12 C -0.130 4.130 13 H 0.118 0.882 14 C -0.147 4.147 15 C 0.018 3.982 16 O -0.315 6.315 17 C 0.378 3.622 18 F -0.156 7.156 19 F -0.164 7.164 20 F -0.156 7.156 21 C -0.191 4.191 22 N -0.070 5.070 23 C -0.032 4.032 24 C -0.023 4.023 25 C -0.118 4.118 26 C -0.143 4.143 27 C -0.130 4.130 28 C -0.145 4.145 29 C -0.111 4.111 30 H 0.223 0.777 31 H 0.134 0.866 32 H -0.180 1.180 33 H -0.185 1.185 34 H 0.195 0.805 35 H 0.146 0.854 36 H 0.137 0.863 37 H 0.235 0.765 38 H 0.109 0.891 39 H 0.091 0.909 40 H 0.118 0.882 41 H 0.132 0.868 42 H 0.243 0.757 43 H 0.127 0.873 44 H 0.112 0.888 45 H 0.171 0.829 46 H 0.142 0.858 47 H 0.140 0.860 48 H 0.142 0.858 49 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 5.455 4.953 2.165 7.680 hybrid contribution -0.316 -0.104 0.751 0.822 sum 5.139 4.850 2.917 7.644 Atomic orbital electron populations 1.86495 1.18365 1.79161 1.49468 1.24248 0.83161 1.10086 0.97172 0.95167 0.91412 0.74242 0.80423 1.20373 1.13256 0.93232 0.99076 1.22278 1.00304 0.95375 0.90437 1.47838 1.48581 1.04399 1.13148 1.21499 0.97178 1.03420 0.78798 1.20532 0.86751 0.81509 0.83228 1.90862 1.24920 1.41018 1.80554 1.45865 1.28532 1.57721 1.06267 1.21294 0.93772 0.99796 0.84127 1.22390 0.96525 0.99903 0.94225 0.88177 1.23128 1.01746 0.89838 0.99983 1.23641 0.98428 0.91021 0.85146 1.86652 1.53644 1.31687 1.59475 1.21294 0.74871 0.77637 0.88420 1.93230 1.47652 1.94235 1.80448 1.93192 1.81895 1.47624 1.93692 1.93185 1.72289 1.72017 1.78157 1.23811 0.96123 0.96581 1.02634 1.77795 1.19138 1.01715 1.08303 1.20633 0.98056 0.92362 0.92116 1.17780 0.96700 0.92059 0.95761 1.21895 0.94995 1.00933 0.93983 1.21132 1.00331 0.93677 0.99156 1.21291 0.95759 0.97086 0.98913 1.21080 0.97326 0.99334 0.96755 1.21206 0.99662 0.92323 0.97862 0.77717 0.86597 1.18022 1.18548 0.80533 0.85434 0.86333 0.76479 0.89085 0.90850 0.88205 0.86845 0.75703 0.87269 0.88833 0.82941 0.85785 0.86016 0.85845 0.85904 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.62 10.10 -35.23 -0.36 -0.98 16 2 C -0.04 -0.01 2.00 36.01 0.07 0.06 16 3 Si 0.69 -1.06 30.82 -169.99 -5.24 -6.30 16 4 C -0.25 -0.41 5.34 -104.75 -0.56 -0.96 16 5 C 0.06 -0.01 9.96 -17.26 -0.17 -0.18 16 6 N -0.36 -0.48 3.40 -62.59 -0.21 -0.69 16 7 C 0.12 -0.33 6.99 -5.20 -0.04 -0.37 16 8 C 0.50 0.11 7.86 -10.99 -0.09 0.03 16 9 O -0.50 -3.04 15.70 5.55 0.09 -2.95 16 10 N -0.73 2.24 5.56 -60.30 -0.33 1.90 16 11 C 0.13 -0.23 5.26 -4.04 -0.02 -0.25 16 12 C -0.11 0.47 3.94 -89.81 -0.35 0.11 16 13 H 0.10 -0.59 8.14 -51.93 -0.42 -1.01 16 14 C -0.11 0.33 6.86 -25.91 -0.18 0.15 16 15 C 0.06 -0.13 1.36 -89.81 -0.12 -0.25 16 16 O -0.51 0.60 11.45 -35.23 -0.40 0.20 16 17 C 0.43 -0.15 2.85 37.16 0.11 -0.05 16 18 F -0.17 -0.27 17.18 2.25 0.04 -0.23 16 19 F -0.18 -0.06 16.65 2.25 0.04 -0.02 16 20 F -0.18 0.04 15.75 2.25 0.04 0.07 16 21 C -0.15 0.62 6.90 -25.92 -0.18 0.44 16 22 N -0.25 -1.26 11.63 33.43 0.39 -0.87 16 23 C 0.13 0.59 6.74 -82.78 -0.56 0.04 16 24 C -0.02 -0.10 5.80 -104.90 -0.61 -0.70 16 25 C -0.10 -0.38 8.94 -39.25 -0.35 -0.74 16 26 C -0.12 -0.36 10.03 -39.63 -0.40 -0.75 16 27 C -0.11 -0.27 10.04 -39.52 -0.40 -0.66 16 28 C -0.13 -0.34 10.03 -39.63 -0.40 -0.74 16 29 C -0.09 -0.36 9.75 -39.26 -0.38 -0.74 16 30 H 0.37 -0.48 8.70 45.56 0.40 -0.08 16 31 H 0.12 0.05 7.84 -51.93 -0.41 -0.36 16 32 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 33 H -0.26 0.11 6.99 56.52 0.39 0.51 16 34 H 0.18 -0.65 6.33 -52.49 -0.33 -0.98 16 35 H 0.13 -0.89 8.07 -51.93 -0.42 -1.31 16 36 H 0.12 -0.60 8.14 -51.93 -0.42 -1.02 16 37 H 0.40 -2.65 8.47 -40.82 -0.35 -3.00 16 38 H 0.09 0.05 6.13 -51.93 -0.32 -0.27 16 39 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 40 H 0.10 -0.23 8.10 -51.93 -0.42 -0.65 16 41 H 0.11 -0.46 7.88 -51.93 -0.41 -0.87 16 42 H 0.39 -1.48 8.42 45.56 0.38 -1.10 16 43 H 0.11 -0.50 7.13 -51.93 -0.37 -0.87 16 44 H 0.09 -0.38 8.10 -51.93 -0.42 -0.80 16 45 H 0.15 0.55 4.52 -52.49 -0.24 0.31 16 46 H 0.12 0.13 8.06 -52.48 -0.42 -0.29 16 47 H 0.12 0.04 8.06 -52.49 -0.42 -0.39 16 48 H 0.12 0.08 8.06 -52.48 -0.42 -0.34 16 49 H 0.12 0.42 8.06 -52.49 -0.42 0.00 16 LS Contribution 419.35 15.07 6.32 6.32 Total: 0.00 -12.84 419.35 -9.32 -22.17 By element: Atomic # 1 Polarization: -7.98 SS G_CDS: -5.06 Total: -13.05 kcal Atomic # 6 Polarization: -0.95 SS G_CDS: -4.62 Total: -5.57 kcal Atomic # 7 Polarization: 0.50 SS G_CDS: -0.16 Total: 0.34 kcal Atomic # 8 Polarization: -3.06 SS G_CDS: -0.67 Total: -3.73 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.11 Total: -0.17 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.24 Total: -6.30 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -12.84 -9.32 -22.17 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_12622748.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.100 kcal (2) G-P(sol) polarization free energy of solvation -12.844 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.944 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.325 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.169 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.269 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds