Wall clock time and date at job start Tue Mar 9 2021 13:46:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38975 * 119.95916 * 2 1 4 4 O 1.35712 * 119.90871 * 0.02562 * 3 2 1 5 5 C 1.39016 * 120.18034 * 180.27468 * 3 2 1 6 6 C 1.50693 * 119.95912 * 179.72423 * 5 3 2 7 7 O 1.42907 * 109.47661 * 284.73143 * 6 5 3 8 8 Si 1.86298 * 109.47618 * 164.72834 * 6 5 3 9 9 C 1.37684 * 120.08812 * 359.45474 * 5 3 2 10 10 C 1.39758 * 119.90754 * 0.27429 * 9 5 3 11 11 C 1.47602 * 120.08597 * 179.97438 * 10 9 5 12 12 O 1.21586 * 120.00061 * 359.97438 * 11 10 9 13 13 N 1.34775 * 119.99848 * 179.97438 * 11 10 9 14 14 C 1.46500 * 119.99675 * 180.02562 * 13 11 10 15 15 C 1.53007 * 109.46797 * 180.02562 * 14 13 11 16 16 H 1.08990 * 112.84659 * 316.19878 * 15 14 13 17 17 C 1.53781 * 113.61034 * 87.50396 * 15 14 13 18 18 C 1.53782 * 87.08447 * 89.11552 * 17 15 14 19 19 O 1.42897 * 113.61411 * 270.88501 * 18 17 15 20 20 C 1.52999 * 113.69521 * 139.98574 * 18 17 15 21 21 F 1.39901 * 109.47013 * 322.46845 * 20 18 17 22 22 F 1.39901 * 109.46768 * 82.46418 * 20 18 17 23 23 F 1.39903 * 109.47287 * 202.46551 * 20 18 17 24 24 C 1.53782 * 113.61083 * 184.99959 * 15 14 13 25 25 C 1.37724 * 119.95750 * 179.73219 * 2 1 3 26 26 H 1.08993 * 109.47097 * 270.26935 * 1 2 3 27 27 H 1.09000 * 109.47145 * 30.26960 * 1 2 3 28 28 H 1.09000 * 109.46730 * 150.26980 * 1 2 3 29 29 H 0.96702 * 114.00420 * 270.27437 * 4 3 2 30 30 H 1.09000 * 109.46936 * 44.72766 * 6 5 3 31 31 H 0.96697 * 114.00527 * 179.97438 * 7 6 5 32 32 H 1.48506 * 109.99834 * 298.68714 * 8 6 5 33 33 H 1.48502 * 110.00011 * 59.99978 * 8 6 5 34 34 H 1.07998 * 120.04737 * 180.29177 * 9 5 3 35 35 H 0.97002 * 120.00122 * 0.02562 * 13 11 10 36 36 H 1.09001 * 109.46992 * 300.00261 * 14 13 11 37 37 H 1.08997 * 109.47460 * 60.00512 * 14 13 11 38 38 H 1.09001 * 113.61286 * 203.65841 * 17 15 14 39 39 H 1.08994 * 113.61967 * 334.56211 * 17 15 14 40 40 H 0.96702 * 113.99916 * 277.49376 * 19 18 17 41 41 H 1.09004 * 113.61745 * 25.43056 * 24 15 14 42 42 H 1.08999 * 113.60994 * 156.25619 * 24 15 14 43 43 H 1.08007 * 120.04369 * 359.97400 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 0.0005 5 6 3.5911 1.2094 -0.0058 6 6 4.3386 2.5179 -0.0120 7 8 4.2721 3.0984 -1.3162 8 14 6.1198 2.2179 0.4440 9 6 4.2860 0.0208 -0.0002 10 6 3.5919 -1.1922 0.0055 11 6 4.3328 -2.4687 0.0110 12 8 5.5487 -2.4659 0.0101 13 7 3.6616 -3.6374 0.0170 14 6 4.3971 -4.9044 0.0230 15 6 3.4055 -6.0697 0.0284 16 1 2.5791 -5.9188 0.7229 17 6 2.9596 -6.5056 -1.3773 18 6 4.1644 -7.4612 -1.3775 19 8 5.3625 -6.8717 -1.8864 20 6 3.8651 -8.8278 -1.9969 21 9 2.5685 -9.2229 -1.6506 22 9 3.9701 -8.7418 -3.3893 23 9 4.7830 -9.7684 -1.5172 24 6 4.0753 -7.4479 0.1577 25 6 2.1947 -1.1932 0.0056 26 1 -0.3633 0.0048 1.0276 27 1 -0.3633 0.8876 -0.5180 28 1 -0.3633 -0.8924 -0.5096 29 1 1.3183 2.7161 -0.8827 30 1 3.8878 3.1973 0.7114 31 1 4.7327 3.9451 -1.3939 32 1 6.2044 1.6438 1.8110 33 1 6.7459 1.2931 -0.5348 34 1 5.3660 0.0258 0.0001 35 1 2.6916 -3.6397 0.0174 36 1 5.0236 -4.9650 -0.8669 37 1 5.0241 -4.9564 0.9130 38 1 1.9970 -7.0167 -1.3911 39 1 3.0302 -5.7137 -2.1229 40 1 5.4244 -6.8771 -2.8514 41 1 5.0468 -7.4167 0.6512 42 1 3.4181 -8.2162 0.5649 43 1 1.6547 -2.1286 0.0104 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_13287732.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:46:31 Heat of formation + Delta-G solvation = -250.266852 kcal Electronic energy + Delta-G solvation = -32949.715126 eV Core-core repulsion = 27740.944000 eV Total energy + Delta-G solvation = -5208.771127 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -51.25287 -48.80605 -48.70299 -41.81924 -41.31899 -40.14295 -37.78903 -37.56348 -36.75096 -35.32808 -34.15372 -32.15908 -29.98439 -28.15472 -27.43191 -27.33706 -26.69557 -24.49684 -23.46757 -22.03774 -21.51103 -20.71320 -20.13968 -19.57605 -19.52902 -19.44364 -18.56164 -18.40689 -17.88135 -17.36740 -16.70737 -16.62090 -16.46893 -16.30433 -15.91308 -15.61928 -15.49822 -15.37670 -15.24321 -15.16917 -15.12917 -14.91279 -14.86820 -14.70752 -14.61254 -14.39954 -14.11016 -13.94239 -13.74938 -13.62051 -13.53096 -13.21120 -13.04094 -12.89103 -12.69042 -12.60068 -12.33457 -11.92437 -11.81236 -11.53746 -11.35456 -11.00329 -10.35348 -10.19915 -10.03409 -9.69946 -4.98298 -0.42070 0.01197 1.26775 1.45000 1.60195 1.70730 1.92882 2.02151 2.27170 2.50682 2.53623 2.55836 2.75664 3.04163 3.13668 3.22092 3.28514 3.39305 3.50045 3.55535 3.63777 3.76081 3.89345 4.10410 4.12358 4.22607 4.24415 4.27448 4.36242 4.47964 4.49231 4.55951 4.57386 4.59404 4.66877 4.71803 4.93946 4.96297 5.02427 5.06020 5.21467 5.28668 5.47280 6.00958 6.35167 6.52221 6.54559 7.11725 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.109 4.109 2 C -0.117 4.117 3 C 0.161 3.839 4 O -0.487 6.487 5 C -0.104 4.104 6 C -0.065 4.065 7 O -0.547 6.547 8 Si 0.678 3.322 9 C -0.054 4.054 10 C -0.138 4.138 11 C 0.561 3.439 12 O -0.531 6.531 13 N -0.725 5.725 14 C 0.130 3.870 15 C -0.113 4.113 16 H 0.100 0.900 17 C -0.154 4.154 18 C 0.062 3.938 19 O -0.507 6.507 20 C 0.433 3.567 21 F -0.175 7.175 22 F -0.183 7.183 23 F -0.174 7.174 24 C -0.108 4.108 25 C -0.066 4.066 26 H 0.077 0.923 27 H 0.072 0.928 28 H 0.070 0.930 29 H 0.399 0.601 30 H 0.081 0.919 31 H 0.385 0.615 32 H -0.252 1.252 33 H -0.245 1.245 34 H 0.139 0.861 35 H 0.400 0.600 36 H 0.092 0.908 37 H 0.076 0.924 38 H 0.109 0.891 39 H 0.093 0.907 40 H 0.392 0.608 41 H 0.100 0.900 42 H 0.113 0.887 43 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.462 3.081 -0.160 5.425 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.117 4.117 3 C 0.116 3.884 4 O -0.299 6.299 5 C -0.105 4.105 6 C -0.175 4.175 7 O -0.354 6.354 8 Si 0.579 3.421 9 C -0.072 4.072 10 C -0.141 4.141 11 C 0.348 3.652 12 O -0.408 6.408 13 N -0.378 5.378 14 C 0.008 3.992 15 C -0.132 4.132 16 H 0.118 0.882 17 C -0.192 4.192 18 C 0.018 3.982 19 O -0.314 6.314 20 C 0.378 3.622 21 F -0.156 7.156 22 F -0.164 7.164 23 F -0.156 7.156 24 C -0.146 4.146 25 C -0.085 4.085 26 H 0.095 0.905 27 H 0.091 0.909 28 H 0.089 0.911 29 H 0.257 0.743 30 H 0.099 0.901 31 H 0.233 0.767 32 H -0.177 1.177 33 H -0.170 1.170 34 H 0.156 0.844 35 H 0.235 0.765 36 H 0.110 0.890 37 H 0.094 0.906 38 H 0.128 0.872 39 H 0.112 0.888 40 H 0.243 0.757 41 H 0.119 0.881 42 H 0.132 0.868 43 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -3.158 1.921 1.158 3.873 hybrid contribution -1.236 -0.593 -1.278 1.874 sum -4.394 1.327 -0.120 4.592 Atomic orbital electron populations 1.20694 0.89486 1.03244 1.03143 1.20205 0.97382 0.91983 1.02141 1.18266 0.88640 0.85407 0.96133 1.84680 1.75559 1.35652 1.34010 1.19613 0.93186 0.93922 1.03779 1.24533 1.10146 0.93907 0.88945 1.86426 1.79402 1.40933 1.28632 0.95436 0.77977 0.88072 0.80590 1.20989 1.00261 0.90543 0.95408 1.19781 0.93554 0.93279 1.07493 1.18092 0.87200 0.83515 0.76397 1.90827 1.13344 1.87496 1.49157 1.45844 1.10358 1.05598 1.75966 1.21340 0.93517 0.80027 1.04360 1.22401 0.99085 0.94237 0.97455 0.88192 1.23816 0.97424 0.99185 0.98775 1.23640 0.89458 0.87281 0.97830 1.86651 1.36942 1.79964 1.27882 1.21287 0.74683 0.89526 0.76687 1.93186 1.38478 1.92142 1.91836 1.93190 1.95752 1.96465 1.31009 1.93233 1.66476 1.68065 1.87780 1.23122 1.03807 0.97624 0.90063 1.21081 0.92406 0.97882 0.97125 0.90484 0.90902 0.91140 0.74269 0.90121 0.76734 1.17679 1.16977 0.84356 0.76490 0.88979 0.90597 0.87250 0.88833 0.75748 0.88146 0.86829 0.84873 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.22 9.78 36.01 0.35 0.57 16 2 C -0.12 -0.03 5.89 -104.54 -0.62 -0.64 16 3 C 0.16 0.25 6.66 -39.02 -0.26 -0.01 16 4 O -0.49 -0.13 11.84 -18.84 -0.22 -0.36 16 5 C -0.10 -0.28 5.30 -104.54 -0.55 -0.83 16 6 C -0.06 -0.03 2.37 36.00 0.09 0.05 16 7 O -0.55 0.13 12.86 -35.23 -0.45 -0.32 16 8 Si 0.68 0.21 30.19 -169.99 -5.13 -4.92 16 9 C -0.05 -0.21 8.20 -39.22 -0.32 -0.53 16 10 C -0.14 -0.35 5.88 -104.96 -0.62 -0.97 16 11 C 0.56 1.93 7.76 -12.44 -0.10 1.83 16 12 O -0.53 -4.02 16.34 5.29 0.09 -3.93 16 13 N -0.72 0.27 5.51 -61.32 -0.34 -0.07 16 14 C 0.13 -0.06 5.26 -4.04 -0.02 -0.08 16 15 C -0.11 0.35 3.94 -89.80 -0.35 0.00 16 16 H 0.10 -0.46 8.14 -51.93 -0.42 -0.89 16 17 C -0.15 0.50 6.91 -25.92 -0.18 0.32 16 18 C 0.06 -0.10 1.36 -89.80 -0.12 -0.22 16 19 O -0.51 0.48 11.44 -35.23 -0.40 0.08 16 20 C 0.43 -0.02 2.85 37.16 0.11 0.08 16 21 F -0.17 -0.02 15.77 2.25 0.04 0.01 16 22 F -0.18 -0.10 16.65 2.25 0.04 -0.06 16 23 F -0.17 -0.30 17.18 2.25 0.04 -0.26 16 24 C -0.11 0.27 6.86 -25.91 -0.18 0.09 16 25 C -0.07 0.01 9.18 -39.22 -0.36 -0.35 16 26 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 27 H 0.07 -0.17 7.53 -51.93 -0.39 -0.56 16 28 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 29 H 0.40 -1.27 9.06 45.56 0.41 -0.85 16 30 H 0.08 -0.03 7.81 -51.93 -0.41 -0.44 16 31 H 0.38 -1.93 8.74 45.56 0.40 -1.54 16 32 H -0.25 -0.84 7.11 56.52 0.40 -0.43 16 33 H -0.24 -0.93 6.75 56.52 0.38 -0.55 16 34 H 0.14 0.71 4.47 -52.49 -0.23 0.48 16 35 H 0.40 -1.34 6.49 -40.82 -0.27 -1.60 16 36 H 0.09 0.11 6.12 -51.93 -0.32 -0.21 16 37 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 38 H 0.11 -0.43 7.14 -51.93 -0.37 -0.80 16 39 H 0.09 -0.30 8.10 -51.93 -0.42 -0.72 16 40 H 0.39 -1.42 8.42 45.56 0.38 -1.03 16 41 H 0.10 -0.19 8.10 -51.93 -0.42 -0.61 16 42 H 0.11 -0.40 7.89 -51.93 -0.41 -0.81 16 43 H 0.13 -0.47 6.39 -52.48 -0.34 -0.81 16 LS Contribution 368.60 15.07 5.55 5.55 Total: 0.00 -10.73 368.60 -7.21 -17.95 By element: Atomic # 1 Polarization: -9.69 SS G_CDS: -3.28 Total: -12.98 kcal Atomic # 6 Polarization: 2.45 SS G_CDS: -3.13 Total: -0.69 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -0.34 Total: -0.07 kcal Atomic # 8 Polarization: -3.54 SS G_CDS: -0.99 Total: -4.53 kcal Atomic # 9 Polarization: -0.43 SS G_CDS: 0.11 Total: -0.31 kcal Atomic # 14 Polarization: 0.21 SS G_CDS: -5.13 Total: -4.92 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -10.73 -7.21 -17.95 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_13287732.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -232.321 kcal (2) G-P(sol) polarization free energy of solvation -10.733 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -243.054 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.213 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.946 kcal (6) G-S(sol) free energy of system = (1) + (5) -250.267 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds