Wall clock time and date at job start Tue Mar 9 2021 13:46:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38975 * 119.95916 * 2 1 4 4 O 1.35712 * 119.90871 * 0.02562 * 3 2 1 5 5 C 1.39016 * 120.18034 * 180.27468 * 3 2 1 6 6 C 1.50693 * 119.95912 * 179.72423 * 5 3 2 7 7 O 1.42907 * 109.47661 * 284.73143 * 6 5 3 8 8 Si 1.86298 * 109.47618 * 164.72834 * 6 5 3 9 9 C 1.37684 * 120.08812 * 359.45474 * 5 3 2 10 10 C 1.39758 * 119.90754 * 0.27429 * 9 5 3 11 11 C 1.47602 * 120.08597 * 179.97438 * 10 9 5 12 12 O 1.21586 * 120.00061 * 359.97438 * 11 10 9 13 13 N 1.34775 * 119.99848 * 179.97438 * 11 10 9 14 14 C 1.46500 * 119.99675 * 180.02562 * 13 11 10 15 15 C 1.53007 * 109.46797 * 180.02562 * 14 13 11 16 16 H 1.08990 * 112.84659 * 316.19878 * 15 14 13 17 17 C 1.53781 * 113.61034 * 87.50396 * 15 14 13 18 18 C 1.53782 * 87.08447 * 89.11552 * 17 15 14 19 19 O 1.42897 * 113.61411 * 270.88501 * 18 17 15 20 20 C 1.52999 * 113.69521 * 139.98574 * 18 17 15 21 21 F 1.39901 * 109.47013 * 322.46845 * 20 18 17 22 22 F 1.39901 * 109.46768 * 82.46418 * 20 18 17 23 23 F 1.39903 * 109.47287 * 202.46551 * 20 18 17 24 24 C 1.53782 * 113.61083 * 184.99959 * 15 14 13 25 25 C 1.37724 * 119.95750 * 179.73219 * 2 1 3 26 26 H 1.08993 * 109.47097 * 270.26935 * 1 2 3 27 27 H 1.09000 * 109.47145 * 30.26960 * 1 2 3 28 28 H 1.09000 * 109.46730 * 150.26980 * 1 2 3 29 29 H 0.96702 * 114.00420 * 270.27437 * 4 3 2 30 30 H 1.09000 * 109.46936 * 44.72766 * 6 5 3 31 31 H 0.96697 * 114.00527 * 179.97438 * 7 6 5 32 32 H 1.48506 * 109.99834 * 298.68714 * 8 6 5 33 33 H 1.48502 * 110.00011 * 59.99978 * 8 6 5 34 34 H 1.07998 * 120.04737 * 180.29177 * 9 5 3 35 35 H 0.97002 * 120.00122 * 0.02562 * 13 11 10 36 36 H 1.09001 * 109.46992 * 300.00261 * 14 13 11 37 37 H 1.08997 * 109.47460 * 60.00512 * 14 13 11 38 38 H 1.09001 * 113.61286 * 203.65841 * 17 15 14 39 39 H 1.08994 * 113.61967 * 334.56211 * 17 15 14 40 40 H 0.96702 * 113.99916 * 277.49376 * 19 18 17 41 41 H 1.09004 * 113.61745 * 25.43056 * 24 15 14 42 42 H 1.08999 * 113.60994 * 156.25619 * 24 15 14 43 43 H 1.08007 * 120.04369 * 359.97400 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 0.0005 5 6 3.5911 1.2094 -0.0058 6 6 4.3386 2.5179 -0.0120 7 8 4.2721 3.0984 -1.3162 8 14 6.1198 2.2179 0.4440 9 6 4.2860 0.0208 -0.0002 10 6 3.5919 -1.1922 0.0055 11 6 4.3328 -2.4687 0.0110 12 8 5.5487 -2.4659 0.0101 13 7 3.6616 -3.6374 0.0170 14 6 4.3971 -4.9044 0.0230 15 6 3.4055 -6.0697 0.0284 16 1 2.5791 -5.9188 0.7229 17 6 2.9596 -6.5056 -1.3773 18 6 4.1644 -7.4612 -1.3775 19 8 5.3625 -6.8717 -1.8864 20 6 3.8651 -8.8278 -1.9969 21 9 2.5685 -9.2229 -1.6506 22 9 3.9701 -8.7418 -3.3893 23 9 4.7830 -9.7684 -1.5172 24 6 4.0753 -7.4479 0.1577 25 6 2.1947 -1.1932 0.0056 26 1 -0.3633 0.0048 1.0276 27 1 -0.3633 0.8876 -0.5180 28 1 -0.3633 -0.8924 -0.5096 29 1 1.3183 2.7161 -0.8827 30 1 3.8878 3.1973 0.7114 31 1 4.7327 3.9451 -1.3939 32 1 6.2044 1.6438 1.8110 33 1 6.7459 1.2931 -0.5348 34 1 5.3660 0.0258 0.0001 35 1 2.6916 -3.6397 0.0174 36 1 5.0236 -4.9650 -0.8669 37 1 5.0241 -4.9564 0.9130 38 1 1.9970 -7.0167 -1.3911 39 1 3.0302 -5.7137 -2.1229 40 1 5.4244 -6.8771 -2.8514 41 1 5.0468 -7.4167 0.6512 42 1 3.4181 -8.2162 0.5649 43 1 1.6547 -2.1286 0.0104 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664666_13287732.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:46:30 Heat of formation + Delta-G solvation = -256.574412 kcal Electronic energy + Delta-G solvation = -32949.988643 eV Core-core repulsion = 27740.944000 eV Total energy + Delta-G solvation = -5209.044643 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -51.26568 -48.80845 -48.75064 -41.88894 -41.22191 -40.27745 -37.77770 -37.59868 -36.73742 -35.39365 -34.15934 -32.21598 -29.94651 -28.08360 -27.42669 -27.13687 -26.72310 -24.56907 -23.41063 -22.06179 -21.63980 -20.60816 -20.07696 -19.59717 -19.54657 -19.43375 -18.61043 -18.39960 -17.96756 -17.22454 -16.73388 -16.69389 -16.58012 -16.25775 -15.96562 -15.65382 -15.51652 -15.48057 -15.25393 -15.19334 -15.14406 -14.95097 -14.91133 -14.75100 -14.52303 -14.30790 -14.08907 -13.97311 -13.78124 -13.56911 -13.47551 -13.09082 -12.94642 -12.91313 -12.69881 -12.50060 -12.20274 -12.17630 -11.63917 -11.54878 -11.36243 -11.13036 -10.38162 -10.34494 -10.08448 -9.76086 -5.09952 -0.52716 -0.07021 1.19808 1.45325 1.50657 1.54607 1.85714 1.90899 2.41312 2.44024 2.56973 2.66633 2.89028 3.03817 3.22167 3.30426 3.36670 3.47942 3.51426 3.55577 3.71746 3.78963 3.87048 4.08626 4.30185 4.31483 4.35007 4.42856 4.50219 4.53522 4.63033 4.68535 4.74048 4.79921 4.82336 4.84327 4.91948 4.97399 5.05394 5.13083 5.23107 5.25578 5.50906 6.24597 6.31006 6.64934 6.83651 6.97933 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C -0.116 4.116 3 C 0.159 3.841 4 O -0.490 6.490 5 C -0.125 4.125 6 C -0.058 4.058 7 O -0.557 6.557 8 Si 0.763 3.237 9 C -0.083 4.083 10 C -0.153 4.153 11 C 0.556 3.444 12 O -0.586 6.586 13 N -0.702 5.702 14 C 0.130 3.870 15 C -0.101 4.101 16 H 0.127 0.873 17 C -0.144 4.144 18 C 0.057 3.943 19 O -0.523 6.523 20 C 0.431 3.569 21 F -0.175 7.175 22 F -0.188 7.188 23 F -0.188 7.188 24 C -0.112 4.112 25 C -0.053 4.053 26 H 0.080 0.920 27 H 0.077 0.923 28 H 0.091 0.909 29 H 0.414 0.586 30 H 0.097 0.903 31 H 0.406 0.594 32 H -0.299 1.299 33 H -0.302 1.302 34 H 0.111 0.889 35 H 0.417 0.583 36 H 0.074 0.926 37 H 0.061 0.939 38 H 0.125 0.875 39 H 0.096 0.904 40 H 0.400 0.600 41 H 0.090 0.910 42 H 0.129 0.871 43 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.633 3.400 -0.186 8.358 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C -0.116 4.116 3 C 0.113 3.887 4 O -0.304 6.304 5 C -0.125 4.125 6 C -0.169 4.169 7 O -0.367 6.367 8 Si 0.672 3.328 9 C -0.102 4.102 10 C -0.156 4.156 11 C 0.344 3.656 12 O -0.468 6.468 13 N -0.355 5.355 14 C 0.007 3.993 15 C -0.119 4.119 16 H 0.145 0.855 17 C -0.181 4.181 18 C 0.013 3.987 19 O -0.332 6.332 20 C 0.376 3.624 21 F -0.156 7.156 22 F -0.170 7.170 23 F -0.169 7.169 24 C -0.149 4.149 25 C -0.071 4.071 26 H 0.099 0.901 27 H 0.095 0.905 28 H 0.109 0.891 29 H 0.275 0.725 30 H 0.115 0.885 31 H 0.257 0.743 32 H -0.226 1.226 33 H -0.231 1.231 34 H 0.129 0.871 35 H 0.256 0.744 36 H 0.092 0.908 37 H 0.079 0.921 38 H 0.143 0.857 39 H 0.114 0.886 40 H 0.253 0.747 41 H 0.108 0.892 42 H 0.147 0.853 43 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges -6.380 2.270 1.108 6.862 hybrid contribution -0.232 -0.758 -1.300 1.523 sum -6.612 1.512 -0.192 6.785 Atomic orbital electron populations 1.20774 0.87368 1.04573 1.03701 1.20548 0.98798 0.91438 1.00843 1.18394 0.88230 0.86428 0.95659 1.84641 1.75126 1.35237 1.35388 1.19860 0.94236 0.94109 1.04321 1.24418 1.09054 0.93698 0.89765 1.86383 1.79828 1.42478 1.27997 0.94793 0.76674 0.85817 0.75535 1.20967 0.99288 0.92194 0.97737 1.19817 0.94871 0.92238 1.08694 1.18374 0.86669 0.84750 0.75796 1.90796 1.15707 1.88251 1.52009 1.45678 1.11182 1.04591 1.74031 1.21312 0.94222 0.80924 1.02840 1.22283 0.98828 0.92460 0.98346 0.85481 1.23827 0.97170 0.98657 0.98472 1.23842 0.89996 0.86652 0.98166 1.86638 1.37707 1.79974 1.28856 1.21591 0.74397 0.89940 0.76461 1.93179 1.38388 1.92235 1.91801 1.93175 1.95771 1.96487 1.31549 1.93202 1.67039 1.68776 1.87932 1.23238 1.03823 0.98436 0.89432 1.21417 0.90991 0.99567 0.95160 0.90122 0.90456 0.89052 0.72488 0.88519 0.74268 1.22639 1.23097 0.87128 0.74366 0.90764 0.92114 0.85725 0.88580 0.74745 0.89170 0.85286 0.81093 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.74 9.78 71.24 0.70 1.44 16 2 C -0.12 0.14 5.89 -19.81 -0.12 0.02 16 3 C 0.16 0.39 6.66 22.63 0.15 0.54 16 4 O -0.49 0.44 11.84 -90.33 -1.07 -0.63 16 5 C -0.12 -0.78 5.30 -19.81 -0.11 -0.89 16 6 C -0.06 -0.10 2.37 71.23 0.17 0.07 16 7 O -0.56 0.39 12.86 -148.98 -1.92 -1.53 16 8 Si 0.76 2.45 30.19 68.60 2.07 4.53 16 9 C -0.08 -0.86 8.20 22.51 0.18 -0.68 16 10 C -0.15 -0.97 5.88 -20.08 -0.12 -1.08 16 11 C 0.56 4.83 7.76 86.72 0.67 5.50 16 12 O -0.59 -11.08 16.34 -3.99 -0.07 -11.15 16 13 N -0.70 0.54 5.51 -466.19 -2.57 -2.03 16 14 C 0.13 -0.03 5.26 86.38 0.45 0.42 16 15 C -0.10 0.75 3.94 -10.26 -0.04 0.71 16 16 H 0.13 -1.56 8.14 -2.39 -0.02 -1.58 16 17 C -0.14 1.13 6.91 31.12 0.21 1.35 16 18 C 0.06 -0.19 1.36 -10.26 -0.01 -0.20 16 19 O -0.52 0.41 11.44 -148.98 -1.70 -1.29 16 20 C 0.43 -0.03 2.85 71.98 0.21 0.18 16 21 F -0.17 0.09 15.77 44.97 0.71 0.80 16 22 F -0.19 -0.27 16.65 44.97 0.75 0.48 16 23 F -0.19 -0.77 17.18 44.97 0.77 0.00 16 24 C -0.11 0.59 6.86 31.12 0.21 0.81 16 25 C -0.05 0.09 9.18 22.50 0.21 0.29 16 26 H 0.08 -0.55 8.14 -2.39 -0.02 -0.57 16 27 H 0.08 -0.56 7.53 -2.39 -0.02 -0.58 16 28 H 0.09 -0.98 8.08 -2.39 -0.02 -1.00 16 29 H 0.41 -3.31 9.06 -74.06 -0.67 -3.98 16 30 H 0.10 -0.14 7.81 -2.39 -0.02 -0.16 16 31 H 0.41 -4.41 8.74 -74.06 -0.65 -5.06 16 32 H -0.30 -3.13 7.11 99.48 0.71 -2.42 16 33 H -0.30 -3.78 6.75 99.48 0.67 -3.10 16 34 H 0.11 1.68 4.47 -2.91 -0.01 1.67 16 35 H 0.42 -3.61 6.49 -92.71 -0.60 -4.21 16 36 H 0.07 0.30 6.12 -2.39 -0.01 0.28 16 37 H 0.06 0.19 8.14 -2.39 -0.02 0.18 16 38 H 0.12 -1.29 7.14 -2.39 -0.02 -1.31 16 39 H 0.10 -0.75 8.10 -2.39 -0.02 -0.77 16 40 H 0.40 -2.40 8.42 -74.06 -0.62 -3.02 16 41 H 0.09 -0.27 8.10 -2.39 -0.02 -0.29 16 42 H 0.13 -1.08 7.89 -2.39 -0.02 -1.10 16 43 H 0.17 -1.77 6.39 -2.91 -0.02 -1.79 16 Total: 0.00 -29.51 368.60 -1.65 -31.16 By element: Atomic # 1 Polarization: -27.42 SS G_CDS: -1.40 Total: -28.82 kcal Atomic # 6 Polarization: 5.70 SS G_CDS: 2.77 Total: 8.48 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: -2.57 Total: -2.03 kcal Atomic # 8 Polarization: -9.84 SS G_CDS: -4.75 Total: -14.60 kcal Atomic # 9 Polarization: -0.95 SS G_CDS: 2.23 Total: 1.28 kcal Atomic # 14 Polarization: 2.45 SS G_CDS: 2.07 Total: 4.53 kcal Total: -29.51 -1.65 -31.16 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_13287732.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -225.413 kcal (2) G-P(sol) polarization free energy of solvation -29.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -254.928 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.646 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.161 kcal (6) G-S(sol) free energy of system = (1) + (5) -256.574 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds