Wall clock time and date at job start Tue Mar 9 2021 13:46:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.47001 * 2 1 4 4 C 1.50699 * 109.46635 * 119.99401 * 2 1 3 5 5 C 1.38508 * 119.80631 * 244.99778 * 4 2 1 6 6 C 1.37834 * 120.30187 * 179.97438 * 5 4 2 7 7 C 1.39662 * 119.90645 * 0.29040 * 6 5 4 8 8 C 1.47538 * 120.19104 * 179.71835 * 7 6 5 9 9 O 1.21594 * 119.99995 * 179.97438 * 8 7 6 10 10 N 1.34778 * 119.99925 * 359.97438 * 8 7 6 11 11 C 1.46502 * 119.99759 * 179.97438 * 10 8 7 12 12 C 1.53001 * 109.46635 * 179.97438 * 11 10 8 13 13 H 1.09003 * 112.85311 * 45.33902 * 12 11 10 14 14 C 1.53791 * 113.61091 * 176.52880 * 12 11 10 15 15 C 1.53781 * 87.07711 * 89.12145 * 14 12 11 16 16 O 1.42906 * 113.61235 * 270.88432 * 15 14 12 17 17 C 1.53000 * 113.61425 * 140.06796 * 15 14 12 18 18 F 1.39898 * 109.47390 * 59.99438 * 17 15 14 19 19 F 1.39903 * 109.47169 * 179.97438 * 17 15 14 20 20 F 1.39904 * 109.46783 * 299.99381 * 17 15 14 21 21 C 1.53774 * 113.61792 * 274.13891 * 12 11 10 22 22 C 1.40178 * 119.61796 * 359.48416 * 7 6 5 23 23 O 1.35653 * 120.14941 * 180.25832 * 22 7 6 24 24 C 1.38103 * 119.80873 * 65.02792 * 4 2 1 25 25 H 0.96702 * 113.99403 * 60.00844 * 1 2 3 26 26 H 1.08997 * 109.47956 * 239.99531 * 2 1 3 27 27 H 1.48496 * 110.00008 * 59.99264 * 3 2 1 28 28 H 1.48502 * 110.00053 * 181.31730 * 3 2 1 29 29 H 1.07995 * 119.84844 * 0.02987 * 5 4 2 30 30 H 1.08002 * 120.04324 * 180.02562 * 6 5 4 31 31 H 0.96992 * 120.00025 * 0.02562 * 10 8 7 32 32 H 1.08992 * 109.47467 * 300.00309 * 11 10 8 33 33 H 1.09004 * 109.46931 * 60.00583 * 11 10 8 34 34 H 1.09002 * 113.61190 * 203.66535 * 14 12 11 35 35 H 1.08995 * 113.61593 * 334.48695 * 14 12 11 36 36 H 0.96700 * 113.99797 * 180.02562 * 16 15 14 37 37 H 1.08999 * 113.61808 * 25.43401 * 21 12 11 38 38 H 1.09005 * 113.61827 * 156.34138 * 21 12 11 39 39 H 0.96705 * 113.99897 * 270.22827 * 23 22 7 40 40 H 1.08001 * 119.95369 * 359.97438 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7103 1.2306 5 6 2.6396 -0.0068 2.1907 6 6 3.1032 -0.6461 3.3203 7 6 2.8635 -2.0108 3.4960 8 6 3.3622 -2.7027 4.6998 9 8 3.1512 -3.8908 4.8495 10 7 4.0518 -2.0179 5.6337 11 6 4.5465 -2.7049 6.8293 12 6 5.2903 -1.7073 7.7195 13 1 4.7545 -0.7657 7.8395 14 6 5.7790 -2.3113 9.0468 15 6 7.0709 -2.6945 8.3058 16 8 7.0145 -3.9801 7.6843 17 6 8.3382 -2.4924 9.1389 18 9 8.2687 -3.2811 10.2923 19 9 9.4561 -2.8662 8.3855 20 9 8.4484 -1.1455 9.5009 21 6 6.7706 -1.5300 7.3430 22 6 2.1421 -2.7182 2.5244 23 8 1.8985 -4.0428 2.6866 24 6 1.6830 -2.0590 1.3941 25 1 -0.3932 0.4416 -0.7652 26 1 1.7925 -0.5139 -0.8899 27 1 1.5613 2.4679 1.2084 28 1 3.5346 1.7704 -0.0321 29 1 2.8287 1.0476 2.0539 30 1 3.6547 -0.0935 4.0665 31 1 4.2199 -1.0701 5.5145 32 1 3.7059 -3.1273 7.3797 33 1 5.2260 -3.5045 6.5339 34 1 5.9297 -1.5721 9.8335 35 1 5.1933 -3.1688 9.3781 36 1 7.8243 -4.2269 7.2170 37 1 6.9860 -1.7581 6.2991 38 1 7.1921 -0.5777 7.6649 39 1 2.5828 -4.6168 2.3158 40 1 1.1300 -2.6007 0.6411 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_13422076.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:46:46 Heat of formation + Delta-G solvation = -242.071613 kcal Electronic energy + Delta-G solvation = -30772.108626 eV Core-core repulsion = 25719.230491 eV Total energy + Delta-G solvation = -5052.878135 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.106 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -51.25287 -48.80768 -48.70251 -41.76438 -41.21171 -39.70333 -38.37262 -37.24675 -36.68903 -35.18417 -33.05013 -31.17289 -30.10596 -27.94171 -27.36917 -26.56840 -23.97592 -23.69191 -23.12328 -21.56335 -20.85969 -20.15390 -19.55045 -19.49052 -19.18928 -18.70293 -18.47229 -17.68468 -17.34193 -16.76187 -16.61354 -16.37365 -16.30236 -16.02440 -15.70627 -15.58182 -15.44115 -15.29353 -15.16864 -14.97873 -14.90049 -14.82991 -14.60339 -14.56792 -14.27560 -14.07189 -13.91392 -13.65771 -13.39667 -13.10692 -13.06602 -12.64381 -12.42996 -12.31674 -12.14581 -11.80696 -11.76960 -11.32519 -10.78583 -10.51841 -10.18718 -10.04477 -9.81231 -5.09348 -0.44186 0.05741 1.12216 1.45031 1.50562 1.75018 1.82328 1.97432 2.27679 2.50451 2.54912 2.55774 2.75659 3.01740 3.16213 3.23941 3.29616 3.39434 3.52916 3.54630 3.65767 3.70963 3.98364 4.12918 4.15824 4.17660 4.23368 4.27809 4.48203 4.50038 4.57958 4.63787 4.67370 4.74815 4.88981 4.98391 5.09714 5.16167 5.34728 5.47653 6.00828 6.40672 6.48326 6.68991 7.20261 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.079 4.079 3 Si 0.687 3.313 4 C -0.031 4.031 5 C -0.142 4.142 6 C -0.064 4.064 7 C -0.164 4.164 8 C 0.559 3.441 9 O -0.514 6.514 10 N -0.729 5.729 11 C 0.132 3.868 12 C -0.113 4.113 13 H 0.099 0.901 14 C -0.108 4.108 15 C 0.062 3.938 16 O -0.507 6.507 17 C 0.433 3.567 18 F -0.174 7.174 19 F -0.183 7.183 20 F -0.175 7.175 21 C -0.154 4.154 22 C 0.175 3.825 23 O -0.474 6.474 24 C -0.126 4.126 25 H 0.385 0.615 26 H 0.079 0.921 27 H -0.249 1.249 28 H -0.253 1.253 29 H 0.127 0.873 30 H 0.133 0.867 31 H 0.398 0.602 32 H 0.075 0.925 33 H 0.092 0.908 34 H 0.113 0.887 35 H 0.100 0.900 36 H 0.391 0.609 37 H 0.093 0.907 38 H 0.109 0.891 39 H 0.398 0.602 40 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.276 5.780 -5.022 7.762 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.189 4.189 3 Si 0.588 3.412 4 C -0.032 4.032 5 C -0.160 4.160 6 C -0.083 4.083 7 C -0.168 4.168 8 C 0.346 3.654 9 O -0.390 6.390 10 N -0.382 5.382 11 C 0.009 3.991 12 C -0.132 4.132 13 H 0.117 0.883 14 C -0.146 4.146 15 C 0.018 3.982 16 O -0.314 6.314 17 C 0.378 3.622 18 F -0.155 7.155 19 F -0.164 7.164 20 F -0.156 7.156 21 C -0.192 4.192 22 C 0.128 3.872 23 O -0.286 6.286 24 C -0.144 4.144 25 H 0.233 0.767 26 H 0.097 0.903 27 H -0.173 1.173 28 H -0.178 1.178 29 H 0.145 0.855 30 H 0.151 0.849 31 H 0.233 0.767 32 H 0.093 0.907 33 H 0.110 0.890 34 H 0.131 0.869 35 H 0.119 0.881 36 H 0.242 0.758 37 H 0.111 0.889 38 H 0.127 0.873 39 H 0.257 0.743 40 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 0.648 5.342 -3.359 6.344 hybrid contribution 1.490 -0.194 -0.118 1.507 sum 2.138 5.149 -3.476 6.570 Atomic orbital electron populations 1.86508 1.16722 1.81911 1.49827 1.24778 0.86194 1.10754 0.97176 0.95069 0.80770 0.77805 0.87551 1.19427 0.95805 0.93435 0.94523 1.20826 1.01111 0.99428 0.94599 1.21080 0.97498 0.92746 0.96929 1.20416 1.03962 0.94808 0.97616 1.17976 0.78155 0.86736 0.82540 1.90851 1.56109 1.14565 1.77492 1.45871 1.57260 1.13173 1.21916 1.21307 0.98616 0.94492 0.84689 1.22407 0.95219 1.00051 0.95536 0.88273 1.23115 0.92409 1.02319 0.96770 1.23701 0.91634 0.87650 0.95208 1.86653 1.42327 1.31046 1.71374 1.21293 0.86649 0.74278 0.79973 1.93232 1.96449 1.74273 1.51594 1.93189 1.56101 1.91227 1.75920 1.93187 1.96451 1.33708 1.92301 1.23856 0.96758 0.97976 1.00576 1.18481 0.92250 0.85298 0.91132 1.84773 1.49289 1.12424 1.82065 1.21339 1.01009 0.94449 0.97630 0.76684 0.90277 1.17326 1.17758 0.85538 0.84892 0.76722 0.90671 0.89024 0.86872 0.88111 0.75794 0.88871 0.87307 0.74331 0.83984 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.32 12.81 -35.23 -0.45 -0.13 16 2 C -0.08 0.10 2.79 36.01 0.10 0.20 16 3 Si 0.69 -1.69 29.83 -169.99 -5.07 -6.76 16 4 C -0.03 -0.04 5.39 -104.57 -0.56 -0.60 16 5 C -0.14 -0.09 8.64 -39.63 -0.34 -0.43 16 6 C -0.06 0.00 9.54 -39.20 -0.37 -0.37 16 7 C -0.16 -0.35 5.89 -104.85 -0.62 -0.97 16 8 C 0.56 1.70 7.76 -12.47 -0.10 1.61 16 9 O -0.51 -3.46 15.16 -16.59 -0.25 -3.71 16 10 N -0.73 0.28 5.51 -61.35 -0.34 -0.06 16 11 C 0.13 -0.06 5.27 -4.04 -0.02 -0.08 16 12 C -0.11 0.34 3.93 -89.81 -0.35 -0.01 16 13 H 0.10 -0.43 8.14 -51.93 -0.42 -0.85 16 14 C -0.11 0.26 6.86 -25.91 -0.18 0.08 16 15 C 0.06 -0.10 1.36 -89.66 -0.12 -0.22 16 16 O -0.51 0.55 11.42 -35.23 -0.40 0.15 16 17 C 0.43 -0.02 2.85 37.16 0.11 0.08 16 18 F -0.17 -0.30 17.18 2.25 0.04 -0.26 16 19 F -0.18 -0.09 16.65 2.25 0.04 -0.05 16 20 F -0.18 -0.03 15.77 2.25 0.04 0.00 16 21 C -0.15 0.50 6.93 -25.78 -0.18 0.32 16 22 C 0.18 0.50 6.72 -38.70 -0.26 0.24 16 23 O -0.47 -1.61 11.58 -40.53 -0.47 -2.08 16 24 C -0.13 -0.22 9.60 -39.47 -0.38 -0.60 16 25 H 0.39 -2.19 8.74 45.56 0.40 -1.80 16 26 H 0.08 -0.24 7.96 -51.93 -0.41 -0.65 16 27 H -0.25 -0.14 7.04 56.52 0.40 0.26 16 28 H -0.25 0.07 7.11 56.52 0.40 0.48 16 29 H 0.13 -0.05 4.83 -52.49 -0.25 -0.30 16 30 H 0.13 -0.44 6.40 -52.49 -0.34 -0.77 16 31 H 0.40 -1.24 6.50 -40.82 -0.27 -1.51 16 32 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 33 H 0.09 0.09 6.08 -51.93 -0.32 -0.23 16 34 H 0.11 -0.38 7.88 -51.93 -0.41 -0.79 16 35 H 0.10 -0.18 8.10 -51.93 -0.42 -0.60 16 36 H 0.39 -1.50 8.42 45.56 0.38 -1.11 16 37 H 0.09 -0.31 8.10 -51.93 -0.42 -0.73 16 38 H 0.11 -0.42 7.15 -51.93 -0.37 -0.79 16 39 H 0.40 -0.24 9.06 45.56 0.41 0.17 16 40 H 0.14 0.12 8.06 -52.49 -0.42 -0.31 16 LS Contribution 347.17 15.07 5.23 5.23 Total: 0.00 -10.93 347.17 -7.40 -18.33 By element: Atomic # 1 Polarization: -7.41 SS G_CDS: -2.48 Total: -9.89 kcal Atomic # 6 Polarization: 2.50 SS G_CDS: -3.28 Total: -0.78 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.34 Total: -0.06 kcal Atomic # 8 Polarization: -4.20 SS G_CDS: -1.57 Total: -5.77 kcal Atomic # 9 Polarization: -0.43 SS G_CDS: 0.11 Total: -0.31 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.07 Total: -6.76 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -10.93 -7.40 -18.33 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_13422076.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -223.740 kcal (2) G-P(sol) polarization free energy of solvation -10.932 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -234.672 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.400 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.332 kcal (6) G-S(sol) free energy of system = (1) + (5) -242.072 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds