Wall clock time and date at job start Tue Mar 9 2021 13:46:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39206 * 119.92937 * 239.73104 * 4 2 1 6 6 C 1.50693 * 119.96798 * 359.97310 * 5 4 2 7 7 O 1.42906 * 109.46958 * 75.00154 * 6 5 4 8 8 Si 1.86295 * 109.47443 * 195.00119 * 6 5 4 9 9 C 1.37634 * 120.06756 * 179.72322 * 5 4 2 10 10 C 1.39785 * 119.92582 * 0.54888 * 9 5 4 11 11 C 1.47520 * 120.06381 * 179.70489 * 10 9 5 12 12 O 1.21594 * 120.00407 * 0.02562 * 11 10 9 13 13 N 1.34775 * 120.00129 * 180.02562 * 11 10 9 14 14 C 1.46502 * 120.00356 * 179.97438 * 13 11 10 15 15 C 1.52999 * 109.47103 * 179.97438 * 14 13 11 16 16 H 1.09003 * 112.85144 * 314.66832 * 15 14 13 17 17 C 1.53787 * 113.61350 * 85.86092 * 15 14 13 18 18 C 1.54054 * 86.98447 * 89.16078 * 17 15 14 19 19 O 1.42896 * 113.61490 * 270.88569 * 18 17 15 20 20 C 1.52997 * 113.69579 * 139.98416 * 18 17 15 21 21 F 1.39896 * 109.47480 * 322.47349 * 20 18 17 22 22 F 1.39902 * 109.46798 * 82.46814 * 20 18 17 23 23 F 1.39901 * 109.47290 * 202.46712 * 20 18 17 24 24 C 1.53775 * 113.61755 * 183.46889 * 15 14 13 25 25 C 1.39802 * 119.86563 * 359.72133 * 10 9 5 26 26 C 1.37590 * 119.93445 * 0.02562 * 25 10 9 27 27 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 28 28 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 29 29 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 30 30 H 1.09006 * 109.46770 * 56.04400 * 3 2 1 31 31 H 1.09001 * 109.47456 * 176.04615 * 3 2 1 32 32 H 1.09000 * 109.46814 * 296.04921 * 3 2 1 33 33 H 1.09001 * 109.47417 * 315.00615 * 6 5 4 34 34 H 0.96694 * 113.99973 * 179.97438 * 7 6 5 35 35 H 1.48499 * 110.00252 * 178.68068 * 8 6 5 36 36 H 1.48493 * 110.00296 * 300.00318 * 8 6 5 37 37 H 1.07995 * 120.03437 * 180.25105 * 9 5 4 38 38 H 0.97002 * 119.99415 * 359.97438 * 13 11 10 39 39 H 1.08995 * 109.46822 * 299.99587 * 14 13 11 40 40 H 1.08996 * 109.47061 * 59.99673 * 14 13 11 41 41 H 1.09006 * 113.61127 * 203.66339 * 17 15 14 42 42 H 1.08999 * 113.61533 * 334.57160 * 17 15 14 43 43 H 0.96701 * 113.99841 * 277.49306 * 19 18 17 44 44 H 1.09008 * 113.61187 * 25.43381 * 24 15 14 45 45 H 1.08991 * 113.62012 * 156.24779 * 24 15 14 46 46 H 1.08003 * 120.03457 * 180.02562 * 25 10 9 47 47 H 1.08001 * 119.97077 * 179.97438 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7839 -1.8297 -0.8520 6 6 3.1270 -2.2377 0.5575 7 8 1.9957 -2.8708 1.1589 8 14 4.5611 -3.4265 0.5282 9 6 3.2740 -2.5528 -1.9156 10 6 2.9603 -2.1699 -3.2228 11 6 3.4893 -2.9389 -4.3652 12 8 4.1985 -3.9071 -4.1703 13 7 3.1864 -2.5682 -5.6252 14 6 3.7122 -3.3315 -6.7597 15 6 3.2215 -2.7056 -8.0667 16 1 2.1596 -2.4606 -8.0462 17 6 4.1094 -1.5554 -8.5704 18 6 4.9239 -2.6231 -9.3253 19 8 5.9923 -3.1782 -8.5557 20 6 5.3639 -2.1858 -10.7239 21 9 4.3473 -1.4299 -11.3175 22 9 6.5247 -1.4110 -10.6265 23 9 5.6221 -3.3164 -11.5064 24 6 3.6498 -3.4843 -9.3217 25 6 2.1445 -1.0566 -3.4454 26 6 1.6534 -0.3409 -2.3778 27 1 -0.3634 -1.0252 0.0708 28 1 -0.3633 0.4513 -0.9233 29 1 -0.3633 0.5740 0.8525 30 1 1.5899 1.9163 0.8525 31 1 3.0829 1.3431 0.0709 32 1 1.7045 1.8723 -0.9233 33 1 3.3990 -1.3545 1.1355 34 1 2.1451 -3.1607 2.0692 35 1 4.9298 -3.8119 1.9141 36 1 4.2030 -4.6351 -0.2567 37 1 3.9041 -3.4122 -1.7404 38 1 2.6203 -1.7961 -5.7807 39 1 4.8017 -3.3149 -6.7351 40 1 3.3631 -4.3622 -6.6973 41 1 3.5895 -0.8578 -9.2270 42 1 4.6686 -1.0566 -7.7788 43 1 6.7964 -2.6409 -8.5542 44 1 3.8382 -4.5419 -9.1361 45 1 3.0037 -3.3143 -10.1828 46 1 1.9001 -0.7586 -4.4543 47 1 1.0234 0.5195 -2.5491 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_13422196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:46:52 Heat of formation + Delta-G solvation = -185.625574 kcal Electronic energy + Delta-G solvation = -34944.072577 eV Core-core repulsion = 29680.285549 eV Total energy + Delta-G solvation = -5263.787027 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.149 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -51.23590 -48.78933 -48.68664 -41.74105 -41.26579 -40.08933 -37.78575 -37.26047 -36.70094 -35.25454 -32.97443 -31.47622 -29.95494 -28.62602 -27.44173 -27.32406 -26.88413 -25.60249 -23.59292 -23.11035 -22.72637 -21.20609 -20.64862 -20.10341 -19.51983 -19.43599 -18.76355 -18.38880 -17.77239 -17.51739 -17.30167 -16.51940 -16.44068 -16.30494 -16.17478 -15.97183 -15.61089 -15.53752 -15.46546 -15.26752 -15.15134 -15.00685 -14.92104 -14.86341 -14.75863 -14.61263 -14.53322 -14.10510 -13.97686 -13.71863 -13.63701 -13.60492 -13.32923 -13.16630 -12.97387 -12.75178 -12.70144 -12.62384 -12.30693 -12.06463 -11.78675 -11.67106 -11.31870 -10.92925 -10.31026 -10.13567 -10.08361 -9.75260 -9.55718 -4.87960 -0.31610 0.17343 1.36327 1.46971 1.66914 1.76320 1.99997 2.05406 2.29764 2.52508 2.57724 2.68238 2.75468 2.77625 3.17835 3.31623 3.37906 3.41594 3.59267 3.69203 3.75367 3.80581 4.04122 4.09531 4.14743 4.24749 4.25217 4.26777 4.29892 4.43306 4.44155 4.49748 4.50745 4.59229 4.64237 4.67233 4.75612 4.80212 4.84887 4.92679 5.01626 5.06132 5.16382 5.27281 5.35603 5.58393 5.77516 6.03386 6.25469 6.42625 6.58231 7.19815 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 N -0.509 5.509 3 C 0.025 3.975 4 C 0.143 3.857 5 C -0.059 4.059 6 C -0.052 4.052 7 O -0.528 6.528 8 Si 0.667 3.333 9 C -0.051 4.051 10 C -0.136 4.136 11 C 0.560 3.440 12 O -0.529 6.529 13 N -0.726 5.726 14 C 0.130 3.870 15 C -0.113 4.113 16 H 0.099 0.901 17 C -0.154 4.154 18 C 0.062 3.938 19 O -0.507 6.507 20 C 0.432 3.568 21 F -0.175 7.175 22 F -0.183 7.183 23 F -0.174 7.174 24 C -0.109 4.109 25 C -0.069 4.069 26 C -0.159 4.159 27 H 0.074 0.926 28 H 0.031 0.969 29 H 0.075 0.925 30 H 0.076 0.924 31 H 0.073 0.927 32 H 0.032 0.968 33 H 0.082 0.918 34 H 0.377 0.623 35 H -0.258 1.258 36 H -0.252 1.252 37 H 0.145 0.855 38 H 0.399 0.601 39 H 0.093 0.907 40 H 0.075 0.925 41 H 0.108 0.892 42 H 0.094 0.906 43 H 0.392 0.608 44 H 0.100 0.900 45 H 0.113 0.887 46 H 0.128 0.872 47 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.823 6.082 0.160 6.351 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 N -0.230 5.230 3 C -0.122 4.122 4 C 0.048 3.952 5 C -0.060 4.060 6 C -0.163 4.163 7 O -0.334 6.334 8 Si 0.568 3.432 9 C -0.070 4.070 10 C -0.139 4.139 11 C 0.347 3.653 12 O -0.406 6.406 13 N -0.379 5.379 14 C 0.008 3.992 15 C -0.132 4.132 16 H 0.117 0.883 17 C -0.192 4.192 18 C 0.018 3.982 19 O -0.314 6.314 20 C 0.378 3.622 21 F -0.157 7.157 22 F -0.164 7.164 23 F -0.156 7.156 24 C -0.147 4.147 25 C -0.089 4.089 26 C -0.179 4.179 27 H 0.093 0.907 28 H 0.049 0.951 29 H 0.094 0.906 30 H 0.095 0.905 31 H 0.092 0.908 32 H 0.051 0.949 33 H 0.100 0.900 34 H 0.225 0.775 35 H -0.183 1.183 36 H -0.176 1.176 37 H 0.162 0.838 38 H 0.234 0.766 39 H 0.111 0.889 40 H 0.093 0.907 41 H 0.127 0.873 42 H 0.112 0.888 43 H 0.242 0.758 44 H 0.119 0.881 45 H 0.131 0.869 46 H 0.146 0.854 47 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -1.535 4.024 0.431 4.328 hybrid contribution -0.851 1.232 -0.464 1.567 sum -2.386 5.256 -0.033 5.772 Atomic orbital electron populations 1.22453 0.85032 1.03217 1.00894 1.59391 1.09030 1.14034 1.40497 1.22519 1.01263 0.87138 1.01266 1.18800 0.94089 0.93534 0.88795 1.19138 0.98300 0.94795 0.93769 1.24504 0.96373 1.02777 0.92624 1.86579 1.35800 1.79151 1.31913 0.95246 0.83366 0.82192 0.82386 1.21192 0.97041 0.98068 0.90658 1.19812 1.02506 0.98101 0.93520 1.18121 0.80382 0.84067 0.82692 1.90830 1.37228 1.27325 1.85265 1.45852 1.53335 1.33186 1.05549 1.21325 1.00704 0.95127 0.82088 1.22403 1.00658 0.96103 0.94020 0.88280 1.23859 0.97951 0.96542 1.00805 1.23696 0.90049 0.99076 0.85371 1.86650 1.24545 1.50832 1.69359 1.21301 0.75263 0.75389 0.90260 1.93184 1.59821 1.76884 1.85779 1.93190 1.50708 1.76150 1.96380 1.93232 1.93999 1.51060 1.77287 1.23113 0.91578 1.01029 0.98932 1.21133 0.95116 0.93567 0.99070 1.21607 1.02164 1.01270 0.92843 0.90682 0.95092 0.90621 0.90494 0.90828 0.94902 0.90038 0.77504 1.18329 1.17614 0.83783 0.76569 0.88912 0.90675 0.87332 0.88779 0.75754 0.88145 0.86896 0.85441 0.85266 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 9.34 60.07 0.56 0.55 16 2 N -0.51 -0.14 4.20 -186.85 -0.78 -0.93 16 3 C 0.02 -0.04 9.38 60.06 0.56 0.52 16 4 C 0.14 0.13 4.70 -83.86 -0.39 -0.26 16 5 C -0.06 -0.11 5.30 -104.49 -0.55 -0.66 16 6 C -0.05 -0.05 2.32 36.00 0.08 0.03 16 7 O -0.53 -1.00 12.86 -35.23 -0.45 -1.45 16 8 Si 0.67 0.46 30.20 -169.99 -5.13 -4.68 16 9 C -0.05 -0.12 8.19 -39.22 -0.32 -0.44 16 10 C -0.14 -0.18 5.88 -104.95 -0.62 -0.80 16 11 C 0.56 1.35 7.76 -12.48 -0.10 1.25 16 12 O -0.53 -3.38 16.34 5.28 0.09 -3.29 16 13 N -0.73 0.75 5.51 -61.36 -0.34 0.41 16 14 C 0.13 -0.12 5.27 -4.04 -0.02 -0.15 16 15 C -0.11 0.39 3.93 -89.81 -0.35 0.04 16 16 H 0.10 -0.48 8.14 -51.93 -0.42 -0.90 16 17 C -0.15 0.56 6.94 -25.77 -0.18 0.38 16 18 C 0.06 -0.12 1.36 -89.66 -0.12 -0.24 16 19 O -0.51 0.70 11.42 -35.23 -0.40 0.30 16 20 C 0.43 -0.13 2.85 37.16 0.11 -0.02 16 21 F -0.18 0.01 15.77 2.25 0.04 0.05 16 22 F -0.18 -0.05 16.65 2.25 0.04 -0.01 16 23 F -0.17 -0.27 17.18 2.25 0.04 -0.23 16 24 C -0.11 0.29 6.86 -25.92 -0.18 0.12 16 25 C -0.07 0.07 9.53 -39.23 -0.37 -0.30 16 26 C -0.16 0.09 8.53 -39.44 -0.34 -0.24 16 27 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 28 H 0.03 -0.04 7.10 -51.93 -0.37 -0.41 16 29 H 0.08 -0.10 8.12 -51.93 -0.42 -0.53 16 30 H 0.08 -0.17 8.12 -51.93 -0.42 -0.60 16 31 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.03 -0.07 7.31 -51.93 -0.38 -0.45 16 33 H 0.08 -0.01 7.78 -51.93 -0.40 -0.41 16 34 H 0.38 -0.68 8.74 45.56 0.40 -0.28 16 35 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 36 H -0.25 -1.07 6.74 56.52 0.38 -0.69 16 37 H 0.14 0.45 4.47 -52.49 -0.23 0.22 16 38 H 0.40 -1.54 6.49 -40.82 -0.26 -1.81 16 39 H 0.09 0.05 6.09 -51.93 -0.32 -0.27 16 40 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 41 H 0.11 -0.46 7.15 -51.93 -0.37 -0.83 16 42 H 0.09 -0.36 8.10 -51.93 -0.42 -0.78 16 43 H 0.39 -1.61 8.42 45.56 0.38 -1.23 16 44 H 0.10 -0.21 8.10 -51.92 -0.42 -0.63 16 45 H 0.11 -0.42 7.89 -51.93 -0.41 -0.83 16 46 H 0.13 -0.54 6.39 -52.48 -0.34 -0.87 16 47 H 0.13 -0.28 6.99 -52.49 -0.37 -0.65 16 LS Contribution 391.92 15.07 5.91 5.91 Total: 0.00 -9.07 391.92 -8.50 -17.57 By element: Atomic # 1 Polarization: -8.15 SS G_CDS: -5.26 Total: -13.41 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -2.23 Total: -0.23 kcal Atomic # 7 Polarization: 0.61 SS G_CDS: -1.12 Total: -0.51 kcal Atomic # 8 Polarization: -3.68 SS G_CDS: -0.77 Total: -4.45 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.11 Total: -0.19 kcal Atomic # 14 Polarization: 0.46 SS G_CDS: -5.13 Total: -4.68 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -9.07 -8.50 -17.57 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_13422196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -168.055 kcal (2) G-P(sol) polarization free energy of solvation -9.067 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -177.122 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.503 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.571 kcal (6) G-S(sol) free energy of system = (1) + (5) -185.626 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds