Wall clock time and date at job start Tue Mar 9 2021 13:46:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39206 * 119.92937 * 239.73104 * 4 2 1 6 6 C 1.50693 * 119.96798 * 359.97310 * 5 4 2 7 7 O 1.42906 * 109.46958 * 75.00154 * 6 5 4 8 8 Si 1.86295 * 109.47443 * 195.00119 * 6 5 4 9 9 C 1.37634 * 120.06756 * 179.72322 * 5 4 2 10 10 C 1.39785 * 119.92582 * 0.54888 * 9 5 4 11 11 C 1.47520 * 120.06381 * 179.70489 * 10 9 5 12 12 O 1.21594 * 120.00407 * 0.02562 * 11 10 9 13 13 N 1.34775 * 120.00129 * 180.02562 * 11 10 9 14 14 C 1.46502 * 120.00356 * 179.97438 * 13 11 10 15 15 C 1.52999 * 109.47103 * 179.97438 * 14 13 11 16 16 H 1.09003 * 112.85144 * 314.66832 * 15 14 13 17 17 C 1.53787 * 113.61350 * 85.86092 * 15 14 13 18 18 C 1.54054 * 86.98447 * 89.16078 * 17 15 14 19 19 O 1.42896 * 113.61490 * 270.88569 * 18 17 15 20 20 C 1.52997 * 113.69579 * 139.98416 * 18 17 15 21 21 F 1.39896 * 109.47480 * 322.47349 * 20 18 17 22 22 F 1.39902 * 109.46798 * 82.46814 * 20 18 17 23 23 F 1.39901 * 109.47290 * 202.46712 * 20 18 17 24 24 C 1.53775 * 113.61755 * 183.46889 * 15 14 13 25 25 C 1.39802 * 119.86563 * 359.72133 * 10 9 5 26 26 C 1.37590 * 119.93445 * 0.02562 * 25 10 9 27 27 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 28 28 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 29 29 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 30 30 H 1.09006 * 109.46770 * 56.04400 * 3 2 1 31 31 H 1.09001 * 109.47456 * 176.04615 * 3 2 1 32 32 H 1.09000 * 109.46814 * 296.04921 * 3 2 1 33 33 H 1.09001 * 109.47417 * 315.00615 * 6 5 4 34 34 H 0.96694 * 113.99973 * 179.97438 * 7 6 5 35 35 H 1.48499 * 110.00252 * 178.68068 * 8 6 5 36 36 H 1.48493 * 110.00296 * 300.00318 * 8 6 5 37 37 H 1.07995 * 120.03437 * 180.25105 * 9 5 4 38 38 H 0.97002 * 119.99415 * 359.97438 * 13 11 10 39 39 H 1.08995 * 109.46822 * 299.99587 * 14 13 11 40 40 H 1.08996 * 109.47061 * 59.99673 * 14 13 11 41 41 H 1.09006 * 113.61127 * 203.66339 * 17 15 14 42 42 H 1.08999 * 113.61533 * 334.57160 * 17 15 14 43 43 H 0.96701 * 113.99841 * 277.49306 * 19 18 17 44 44 H 1.09008 * 113.61187 * 25.43381 * 24 15 14 45 45 H 1.08991 * 113.62012 * 156.24779 * 24 15 14 46 46 H 1.08003 * 120.03457 * 180.02562 * 25 10 9 47 47 H 1.08001 * 119.97077 * 179.97438 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7839 -1.8297 -0.8520 6 6 3.1270 -2.2377 0.5575 7 8 1.9957 -2.8708 1.1589 8 14 4.5611 -3.4265 0.5282 9 6 3.2740 -2.5528 -1.9156 10 6 2.9603 -2.1699 -3.2228 11 6 3.4893 -2.9389 -4.3652 12 8 4.1985 -3.9071 -4.1703 13 7 3.1864 -2.5682 -5.6252 14 6 3.7122 -3.3315 -6.7597 15 6 3.2215 -2.7056 -8.0667 16 1 2.1596 -2.4606 -8.0462 17 6 4.1094 -1.5554 -8.5704 18 6 4.9239 -2.6231 -9.3253 19 8 5.9923 -3.1782 -8.5557 20 6 5.3639 -2.1858 -10.7239 21 9 4.3473 -1.4299 -11.3175 22 9 6.5247 -1.4110 -10.6265 23 9 5.6221 -3.3164 -11.5064 24 6 3.6498 -3.4843 -9.3217 25 6 2.1445 -1.0566 -3.4454 26 6 1.6534 -0.3409 -2.3778 27 1 -0.3634 -1.0252 0.0708 28 1 -0.3633 0.4513 -0.9233 29 1 -0.3633 0.5740 0.8525 30 1 1.5899 1.9163 0.8525 31 1 3.0829 1.3431 0.0709 32 1 1.7045 1.8723 -0.9233 33 1 3.3990 -1.3545 1.1355 34 1 2.1451 -3.1607 2.0692 35 1 4.9298 -3.8119 1.9141 36 1 4.2030 -4.6351 -0.2567 37 1 3.9041 -3.4122 -1.7404 38 1 2.6203 -1.7961 -5.7807 39 1 4.8017 -3.3149 -6.7351 40 1 3.3631 -4.3622 -6.6973 41 1 3.5895 -0.8578 -9.2270 42 1 4.6686 -1.0566 -7.7788 43 1 6.7964 -2.6409 -8.5542 44 1 3.8382 -4.5419 -9.1361 45 1 3.0037 -3.3143 -10.1828 46 1 1.9001 -0.7586 -4.4543 47 1 1.0234 0.5195 -2.5491 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664666_13422196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:46:51 Heat of formation + Delta-G solvation = -188.025263 kcal Electronic energy + Delta-G solvation = -34944.176635 eV Core-core repulsion = 29680.285549 eV Total energy + Delta-G solvation = -5263.891086 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.149 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -51.22667 -48.76887 -48.71403 -41.74342 -41.13561 -40.16151 -37.83814 -37.28548 -36.63971 -35.27253 -32.99296 -31.48138 -29.88187 -28.49503 -27.40305 -27.08276 -26.89707 -25.57244 -23.48850 -23.12529 -22.72977 -21.22490 -20.53592 -20.01503 -19.51201 -19.40584 -18.73865 -18.49079 -17.79350 -17.49053 -17.14102 -16.52429 -16.48127 -16.31823 -16.11334 -15.90211 -15.64163 -15.57885 -15.44760 -15.22172 -15.15537 -15.06285 -14.92365 -14.88161 -14.74026 -14.58387 -14.44055 -14.03138 -14.00086 -13.79959 -13.58965 -13.45797 -13.29452 -13.04397 -12.91973 -12.71196 -12.59970 -12.44637 -12.14420 -12.06751 -11.92560 -11.58141 -11.24274 -11.03906 -10.40685 -10.22387 -10.09535 -9.75142 -9.47053 -4.99567 -0.35910 0.16468 1.26395 1.51069 1.55133 1.66593 1.89876 2.00386 2.48905 2.61419 2.62966 2.71220 2.82435 2.93573 3.36160 3.40200 3.45161 3.54605 3.68428 3.76543 3.77953 3.85824 4.07516 4.16277 4.26212 4.38574 4.40867 4.47769 4.49403 4.49790 4.55111 4.63894 4.69711 4.73608 4.79334 4.82232 4.89112 4.92324 4.99755 5.02925 5.06763 5.13224 5.17721 5.27161 5.36556 5.57981 5.89624 6.30634 6.31118 6.45485 6.64621 7.13221 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 N -0.522 5.522 3 C 0.024 3.976 4 C 0.139 3.861 5 C -0.076 4.076 6 C -0.049 4.049 7 O -0.546 6.546 8 Si 0.729 3.271 9 C -0.069 4.069 10 C -0.149 4.149 11 C 0.556 3.444 12 O -0.582 6.582 13 N -0.706 5.706 14 C 0.131 3.869 15 C -0.101 4.101 16 H 0.124 0.876 17 C -0.143 4.143 18 C 0.058 3.942 19 O -0.521 6.521 20 C 0.430 3.570 21 F -0.176 7.176 22 F -0.188 7.188 23 F -0.189 7.189 24 C -0.113 4.113 25 C -0.054 4.054 26 C -0.156 4.156 27 H 0.056 0.944 28 H 0.043 0.957 29 H 0.084 0.916 30 H 0.084 0.916 31 H 0.073 0.927 32 H 0.043 0.957 33 H 0.096 0.904 34 H 0.391 0.609 35 H -0.276 1.276 36 H -0.310 1.310 37 H 0.124 0.876 38 H 0.416 0.584 39 H 0.077 0.923 40 H 0.059 0.941 41 H 0.122 0.878 42 H 0.099 0.901 43 H 0.401 0.599 44 H 0.089 0.911 45 H 0.127 0.873 46 H 0.165 0.835 47 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.345 8.717 -0.405 9.346 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 N -0.243 5.243 3 C -0.121 4.121 4 C 0.044 3.956 5 C -0.077 4.077 6 C -0.159 4.159 7 O -0.355 6.355 8 Si 0.636 3.364 9 C -0.088 4.088 10 C -0.152 4.152 11 C 0.345 3.655 12 O -0.463 6.463 13 N -0.358 5.358 14 C 0.008 3.992 15 C -0.120 4.120 16 H 0.142 0.858 17 C -0.180 4.180 18 C 0.014 3.986 19 O -0.330 6.330 20 C 0.375 3.625 21 F -0.157 7.157 22 F -0.170 7.170 23 F -0.170 7.170 24 C -0.151 4.151 25 C -0.073 4.073 26 C -0.176 4.176 27 H 0.075 0.925 28 H 0.061 0.939 29 H 0.103 0.897 30 H 0.102 0.898 31 H 0.091 0.909 32 H 0.061 0.939 33 H 0.114 0.886 34 H 0.241 0.759 35 H -0.202 1.202 36 H -0.238 1.238 37 H 0.142 0.858 38 H 0.255 0.745 39 H 0.095 0.905 40 H 0.077 0.923 41 H 0.140 0.860 42 H 0.117 0.883 43 H 0.253 0.747 44 H 0.108 0.892 45 H 0.145 0.855 46 H 0.182 0.818 47 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -3.066 6.719 -0.140 7.387 hybrid contribution -0.383 0.364 -0.324 0.620 sum -3.450 7.083 -0.464 7.892 Atomic orbital electron populations 1.22431 0.84680 1.02328 1.01944 1.59354 1.09404 1.15038 1.40525 1.22563 1.01267 0.86186 1.02125 1.18957 0.93638 0.93151 0.89857 1.19228 0.99246 0.95530 0.93698 1.24491 0.95697 1.02954 0.92776 1.86541 1.36407 1.79354 1.33205 0.94530 0.82947 0.79831 0.79100 1.21140 0.97775 0.98040 0.91842 1.19817 1.03627 0.99196 0.92569 1.18387 0.79784 0.83502 0.83855 1.90805 1.39746 1.29663 1.86048 1.45691 1.52511 1.33201 1.04442 1.21275 0.99861 0.94763 0.83334 1.22283 1.01942 0.95727 0.92004 0.85786 1.23866 0.97307 0.96169 1.00690 1.23884 0.90061 1.00179 0.84430 1.86637 1.25334 1.51691 1.69377 1.21629 0.75068 0.74925 0.90852 1.93176 1.59739 1.76856 1.85930 1.93175 1.51112 1.76257 1.96410 1.93200 1.94117 1.51859 1.77847 1.23228 0.91542 1.00499 0.99810 1.21451 0.93168 0.91810 1.00874 1.21869 1.01884 1.01711 0.92108 0.92507 0.93859 0.89749 0.89774 0.90854 0.93874 0.88580 0.75897 1.20238 1.23816 0.85822 0.74534 0.90519 0.92311 0.85962 0.88290 0.74694 0.89192 0.85535 0.81768 0.82897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 9.34 127.69 1.19 1.12 16 2 N -0.52 0.27 4.20 -745.08 -3.13 -2.86 16 3 C 0.02 -0.12 9.38 127.69 1.20 1.08 16 4 C 0.14 0.16 4.70 38.47 0.18 0.34 16 5 C -0.08 -0.33 5.30 -19.78 -0.10 -0.44 16 6 C -0.05 -0.14 2.32 71.23 0.17 0.03 16 7 O -0.55 -2.60 12.86 -148.98 -1.92 -4.52 16 8 Si 0.73 2.69 30.20 68.60 2.07 4.77 16 9 C -0.07 -0.45 8.19 22.50 0.18 -0.27 16 10 C -0.15 -0.47 5.88 -20.08 -0.12 -0.58 16 11 C 0.56 3.28 7.76 86.69 0.67 3.95 16 12 O -0.58 -9.12 16.34 -4.01 -0.07 -9.19 16 13 N -0.71 1.81 5.51 -466.29 -2.57 -0.76 16 14 C 0.13 -0.21 5.27 86.38 0.46 0.24 16 15 C -0.10 0.83 3.93 -10.27 -0.04 0.79 16 16 H 0.12 -1.56 8.14 -2.39 -0.02 -1.58 16 17 C -0.14 1.25 6.94 31.22 0.22 1.47 16 18 C 0.06 -0.24 1.36 -10.17 -0.01 -0.25 16 19 O -0.52 1.02 11.42 -148.98 -1.70 -0.68 16 20 C 0.43 -0.26 2.85 71.98 0.21 -0.06 16 21 F -0.18 0.15 15.77 44.97 0.71 0.86 16 22 F -0.19 -0.13 16.65 44.97 0.75 0.62 16 23 F -0.19 -0.69 17.18 44.97 0.77 0.08 16 24 C -0.11 0.66 6.86 31.12 0.21 0.87 16 25 C -0.05 0.22 9.53 22.50 0.21 0.43 16 26 C -0.16 0.51 8.53 22.36 0.19 0.71 16 27 H 0.06 0.09 8.14 -2.39 -0.02 0.08 16 28 H 0.04 -0.21 7.10 -2.39 -0.02 -0.22 16 29 H 0.08 -0.34 8.12 -2.38 -0.02 -0.36 16 30 H 0.08 -0.53 8.12 -2.38 -0.02 -0.55 16 31 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 32 H 0.04 -0.29 7.31 -2.39 -0.02 -0.31 16 33 H 0.10 -0.02 7.78 -2.39 -0.02 -0.04 16 34 H 0.39 -1.09 8.74 -74.06 -0.65 -1.74 16 35 H -0.28 -1.72 7.11 99.48 0.71 -1.01 16 36 H -0.31 -4.10 6.74 99.48 0.67 -3.43 16 37 H 0.12 1.25 4.47 -2.91 -0.01 1.24 16 38 H 0.42 -4.17 6.49 -92.71 -0.60 -4.77 16 39 H 0.08 0.18 6.09 -2.39 -0.01 0.16 16 40 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 41 H 0.12 -1.34 7.15 -2.38 -0.02 -1.35 16 42 H 0.10 -0.91 8.10 -2.39 -0.02 -0.93 16 43 H 0.40 -2.93 8.42 -74.06 -0.62 -3.55 16 44 H 0.09 -0.31 8.10 -2.38 -0.02 -0.33 16 45 H 0.13 -1.08 7.89 -2.39 -0.02 -1.10 16 46 H 0.16 -2.00 6.39 -2.91 -0.02 -2.02 16 47 H 0.15 -1.22 6.99 -2.91 -0.02 -1.24 16 Total: 0.00 -24.50 391.92 -1.07 -25.57 By element: Atomic # 1 Polarization: -22.51 SS G_CDS: -0.81 Total: -23.32 kcal Atomic # 6 Polarization: 4.61 SS G_CDS: 4.81 Total: 9.42 kcal Atomic # 7 Polarization: 2.08 SS G_CDS: -5.70 Total: -3.61 kcal Atomic # 8 Polarization: -10.70 SS G_CDS: -3.68 Total: -14.38 kcal Atomic # 9 Polarization: -0.68 SS G_CDS: 2.23 Total: 1.55 kcal Atomic # 14 Polarization: 2.69 SS G_CDS: 2.07 Total: 4.77 kcal Total: -24.50 -1.07 -25.57 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_13422196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -162.451 kcal (2) G-P(sol) polarization free energy of solvation -24.503 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -186.954 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.071 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.574 kcal (6) G-S(sol) free energy of system = (1) + (5) -188.025 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds