Wall clock time and date at job start Tue Mar 9 2021 13:47:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86307 * 109.47001 * 2 1 4 4 C 1.50707 * 109.47211 * 240.00311 * 2 1 3 5 5 C 1.38264 * 119.94209 * 299.99873 * 4 2 1 6 6 C 1.38145 * 120.05437 * 180.02562 * 5 4 2 7 7 C 1.38734 * 119.94237 * 0.25588 * 6 5 4 8 8 O 1.35904 * 120.05053 * 179.71805 * 7 6 5 9 9 C 1.42903 * 116.99671 * 179.97438 * 8 7 6 10 10 C 1.50698 * 109.47143 * 180.02562 * 9 8 7 11 11 O 1.21280 * 119.99707 * 0.02562 * 10 9 8 12 12 N 1.34771 * 119.99895 * 180.02562 * 10 9 8 13 13 C 1.46503 * 119.99620 * 180.02562 * 12 10 9 14 14 C 1.53007 * 109.46864 * 179.97438 * 13 12 10 15 15 H 1.08998 * 112.84935 * 316.19607 * 14 13 12 16 16 C 1.53781 * 113.61188 * 87.50587 * 14 13 12 17 17 C 1.53777 * 87.08077 * 89.11505 * 16 14 13 18 18 O 1.42901 * 113.61548 * 270.88091 * 17 16 14 19 19 C 1.53004 * 113.68691 * 139.99101 * 17 16 14 20 20 F 1.39894 * 109.47662 * 322.46513 * 19 17 16 21 21 F 1.39907 * 109.46920 * 82.46663 * 19 17 16 22 22 F 1.39906 * 109.46908 * 202.45994 * 19 17 16 23 23 C 1.53773 * 87.08002 * 25.43247 * 17 16 14 24 24 C 1.38734 * 119.88948 * 359.51611 * 7 6 5 25 25 C 1.38137 * 119.94186 * 0.45767 * 24 7 6 26 26 H 0.96698 * 114.00273 * 59.99448 * 1 2 3 27 27 H 1.08996 * 109.47688 * 119.99798 * 2 1 3 28 28 H 1.48503 * 109.99752 * 60.00335 * 3 2 1 29 29 H 1.48502 * 109.99783 * 181.32159 * 3 2 1 30 30 H 1.07999 * 119.97244 * 359.97438 * 5 4 2 31 31 H 1.08002 * 120.02435 * 179.97438 * 6 5 4 32 32 H 1.09002 * 109.47137 * 300.00908 * 9 8 7 33 33 H 1.09001 * 109.46597 * 60.00188 * 9 8 7 34 34 H 0.97000 * 120.00601 * 359.97438 * 12 10 9 35 35 H 1.08996 * 109.47564 * 299.99576 * 13 12 10 36 36 H 1.08995 * 109.47301 * 60.00599 * 13 12 10 37 37 H 1.09008 * 113.61148 * 203.66577 * 16 14 13 38 38 H 1.09003 * 113.61506 * 334.56329 * 16 14 13 39 39 H 0.96703 * 113.99881 * 277.50617 * 18 17 16 40 40 H 1.09010 * 113.61320 * 220.01650 * 23 17 16 41 41 H 1.09006 * 113.69524 * 89.12970 * 23 17 16 42 42 H 1.08000 * 120.02383 * 180.23084 * 24 7 6 43 43 H 1.08007 * 119.97511 * 179.76987 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5966 -2.0341 -1.4482 6 6 2.0563 -2.6877 -2.5751 7 6 2.8588 -2.0162 -3.4861 8 8 3.3169 -2.6587 -4.5926 9 6 4.1377 -1.9050 -5.4872 10 6 4.5475 -2.7755 -6.6471 11 8 4.1731 -3.9277 -6.7024 12 7 5.3299 -2.2735 -7.6228 13 6 5.7278 -3.1197 -8.7506 14 6 6.6067 -2.3127 -9.7084 15 1 6.2222 -1.3094 -9.8922 16 6 8.1014 -2.3452 -9.3483 17 6 8.2053 -3.6026 -10.2275 18 8 7.9574 -4.8186 -9.5190 19 6 9.4786 -3.6571 -11.0741 20 9 9.7924 -2.3716 -11.5280 21 9 10.5340 -4.1482 -10.2978 22 9 9.2739 -4.5018 -12.1704 23 6 6.9799 -3.0739 -10.9914 24 6 3.1893 -0.6866 -3.2678 25 6 2.7266 -0.0374 -2.1396 26 1 -0.3933 0.4418 -0.7650 27 1 1.7924 -0.5138 0.8899 28 1 1.5614 2.4679 1.2086 29 1 3.5346 1.7703 -0.0322 30 1 0.9760 -2.5578 -0.7362 31 1 1.7949 -3.7218 -2.7445 32 1 3.5778 -1.0462 -5.8577 33 1 5.0268 -1.5590 -4.9601 34 1 5.6291 -1.3518 -7.5788 35 1 6.2870 -3.9790 -8.3807 36 1 4.8383 -3.4645 -9.2778 37 1 8.6624 -1.4943 -9.7350 38 1 8.2920 -2.5341 -8.2918 39 1 8.7245 -5.1560 -9.0365 40 1 6.2650 -3.8512 -11.2615 41 1 7.2328 -2.4222 -11.8278 42 1 3.8107 -0.1607 -3.9774 43 1 2.9867 0.9966 -1.9673 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_2989410.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:47:20 Heat of formation + Delta-G solvation = -238.828714 kcal Electronic energy + Delta-G solvation = -31730.268636 eV Core-core repulsion = 26521.993505 eV Total energy + Delta-G solvation = -5208.275132 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -51.27067 -48.82481 -48.71995 -41.71454 -41.34458 -40.33101 -38.97935 -37.16064 -36.74528 -35.29456 -32.48053 -31.78732 -30.85184 -29.25745 -27.40836 -26.92427 -26.11705 -24.06026 -23.54723 -22.41428 -21.73937 -20.79145 -20.17109 -19.57628 -19.51740 -19.46016 -18.46680 -18.09467 -17.57965 -17.44149 -17.02693 -16.85906 -16.43434 -16.33244 -16.05348 -15.96545 -15.62527 -15.59735 -15.45620 -15.20874 -15.18440 -14.93694 -14.89031 -14.76494 -14.67491 -14.63427 -14.27729 -14.17989 -13.79096 -13.69086 -13.57347 -13.48880 -13.14064 -12.68716 -12.38071 -12.24394 -12.13704 -12.07154 -11.84189 -11.75443 -11.37687 -10.93508 -10.44139 -10.23003 -10.07360 -9.23752 -5.08026 0.26418 0.27368 1.27398 1.37126 1.43041 1.45188 1.58604 1.94309 2.22490 2.46003 2.48675 2.54535 2.63829 2.73729 3.10711 3.25882 3.36815 3.41640 3.46241 3.58525 3.67764 3.70454 3.83204 3.83903 3.85528 4.07527 4.20130 4.23771 4.23934 4.41744 4.45025 4.48772 4.53620 4.60244 4.63177 4.67823 4.92484 4.93645 5.12179 5.20933 5.22424 5.48165 5.65465 5.98494 6.17368 6.32087 6.57087 7.04117 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.064 4.064 3 Si 0.687 3.313 4 C -0.157 4.157 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.515 3.485 11 O -0.509 6.509 12 N -0.727 5.727 13 C 0.132 3.868 14 C -0.112 4.112 15 H 0.101 0.899 16 C -0.154 4.154 17 C 0.061 3.939 18 O -0.507 6.507 19 C 0.433 3.567 20 F -0.175 7.175 21 F -0.183 7.183 22 F -0.174 7.174 23 C -0.109 4.109 24 C -0.206 4.206 25 C -0.076 4.076 26 H 0.379 0.621 27 H 0.113 0.887 28 H -0.255 1.255 29 H -0.259 1.259 30 H 0.135 0.865 31 H 0.136 0.864 32 H 0.096 0.904 33 H 0.094 0.906 34 H 0.402 0.598 35 H 0.092 0.908 36 H 0.076 0.924 37 H 0.109 0.891 38 H 0.093 0.907 39 H 0.392 0.608 40 H 0.100 0.900 41 H 0.114 0.886 42 H 0.132 0.868 43 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.231 6.685 -2.289 7.173 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.175 4.175 3 Si 0.589 3.411 4 C -0.158 4.158 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.088 3.912 8 O -0.200 6.200 9 C -0.038 4.038 10 C 0.299 3.701 11 O -0.383 6.383 12 N -0.382 5.382 13 C 0.010 3.990 14 C -0.131 4.131 15 H 0.119 0.881 16 C -0.192 4.192 17 C 0.018 3.982 18 O -0.315 6.315 19 C 0.378 3.622 20 F -0.156 7.156 21 F -0.164 7.164 22 F -0.156 7.156 23 C -0.147 4.147 24 C -0.225 4.225 25 C -0.094 4.094 26 H 0.226 0.774 27 H 0.130 0.870 28 H -0.180 1.180 29 H -0.184 1.184 30 H 0.153 0.847 31 H 0.154 0.846 32 H 0.114 0.886 33 H 0.112 0.888 34 H 0.236 0.764 35 H 0.110 0.890 36 H 0.094 0.906 37 H 0.127 0.873 38 H 0.112 0.888 39 H 0.243 0.757 40 H 0.119 0.881 41 H 0.132 0.868 42 H 0.149 0.851 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.938 5.960 -1.677 6.262 hybrid contribution 1.400 -0.075 0.114 1.407 sum 2.338 5.885 -1.563 6.522 Atomic orbital electron populations 1.86501 1.17173 1.81686 1.49269 1.24979 0.85192 1.09868 0.97414 0.94818 0.80789 0.78195 0.87259 1.20258 1.01818 0.95615 0.98094 1.20859 0.96804 0.93411 0.95819 1.20545 1.00292 1.01316 0.94225 1.19078 0.94253 0.91052 0.86782 1.86179 1.63958 1.38578 1.31317 1.22466 0.96298 0.94556 0.90524 1.20001 0.78911 0.88119 0.83060 1.90807 1.53081 1.17588 1.76816 1.45770 1.52723 1.16106 1.23610 1.21330 0.98588 0.93327 0.85796 1.22394 0.94566 1.00636 0.95510 0.88110 1.23817 0.97413 0.96546 1.01397 1.23644 0.91731 0.88494 0.94379 1.86651 1.40394 1.37559 1.66863 1.21292 0.86805 0.73952 0.80157 1.93185 1.93825 1.38807 1.89826 1.93192 1.60656 1.87911 1.74668 1.93235 1.94914 1.71389 1.56016 1.23124 0.94630 1.00029 0.96881 1.21165 1.06306 0.94175 1.00854 1.20785 0.96274 0.99064 0.93250 0.77377 0.86976 1.18006 1.18402 0.84740 0.84619 0.88641 0.88777 0.76403 0.89000 0.90567 0.87258 0.88843 0.75718 0.88130 0.86814 0.85061 0.85323 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.05 12.77 -35.23 -0.45 -0.50 16 2 C -0.06 0.03 2.82 36.01 0.10 0.13 16 3 Si 0.69 -0.99 29.78 -169.99 -5.06 -6.06 16 4 C -0.16 0.00 5.39 -104.60 -0.56 -0.56 16 5 C -0.05 -0.04 9.60 -39.61 -0.38 -0.42 16 6 C -0.15 -0.21 9.99 -39.43 -0.39 -0.61 16 7 C 0.13 0.17 6.69 -39.22 -0.26 -0.09 16 8 O -0.29 -0.67 9.67 -39.35 -0.38 -1.05 16 9 C 0.04 -0.07 5.22 36.00 0.19 0.12 16 10 C 0.51 0.32 7.91 -10.99 -0.09 0.23 16 11 O -0.51 -3.07 16.50 -14.35 -0.24 -3.31 16 12 N -0.73 2.09 5.56 -60.29 -0.33 1.76 16 13 C 0.13 -0.26 5.26 -4.04 -0.02 -0.28 16 14 C -0.11 0.49 3.94 -89.81 -0.35 0.14 16 15 H 0.10 -0.60 8.14 -51.93 -0.42 -1.02 16 16 C -0.15 0.66 6.91 -25.92 -0.18 0.48 16 17 C 0.06 -0.15 1.36 -89.81 -0.12 -0.27 16 18 O -0.51 0.86 11.44 -35.23 -0.40 0.46 16 19 C 0.43 -0.27 2.85 37.16 0.11 -0.17 16 20 F -0.17 0.08 15.77 2.25 0.04 0.11 16 21 F -0.18 -0.01 16.65 2.25 0.04 0.03 16 22 F -0.17 -0.22 17.18 2.25 0.04 -0.18 16 23 C -0.11 0.36 6.86 -25.93 -0.18 0.18 16 24 C -0.21 0.18 9.04 -39.44 -0.36 -0.18 16 25 C -0.08 0.07 8.66 -39.61 -0.34 -0.27 16 26 H 0.38 -1.42 8.70 45.56 0.40 -1.02 16 27 H 0.11 0.01 7.96 -51.93 -0.41 -0.41 16 28 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 29 H -0.26 -0.19 7.11 56.52 0.40 0.22 16 30 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 31 H 0.14 0.15 8.06 -52.49 -0.42 -0.27 16 32 H 0.10 -0.43 7.65 -51.93 -0.40 -0.82 16 33 H 0.09 -0.40 7.67 -51.93 -0.40 -0.80 16 34 H 0.40 -2.52 8.47 -40.82 -0.35 -2.87 16 35 H 0.09 -0.01 6.12 -51.93 -0.32 -0.33 16 36 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.11 -0.52 7.14 -51.92 -0.37 -0.90 16 38 H 0.09 -0.41 8.10 -51.93 -0.42 -0.83 16 39 H 0.39 -1.70 8.42 45.56 0.38 -1.31 16 40 H 0.10 -0.27 8.10 -51.92 -0.42 -0.69 16 41 H 0.11 -0.49 7.89 -51.93 -0.41 -0.90 16 42 H 0.13 -0.49 6.30 -52.49 -0.33 -0.82 16 43 H 0.13 -0.38 4.87 -52.48 -0.26 -0.64 16 LS Contribution 371.82 15.07 5.60 5.60 Total: 0.00 -10.93 371.82 -8.19 -19.12 By element: Atomic # 1 Polarization: -10.23 SS G_CDS: -4.19 Total: -14.41 kcal Atomic # 6 Polarization: 1.28 SS G_CDS: -2.85 Total: -1.57 kcal Atomic # 7 Polarization: 2.09 SS G_CDS: -0.33 Total: 1.76 kcal Atomic # 8 Polarization: -2.93 SS G_CDS: -1.47 Total: -4.40 kcal Atomic # 9 Polarization: -0.15 SS G_CDS: 0.11 Total: -0.04 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: -5.06 Total: -6.06 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -10.93 -8.19 -19.12 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_2989410.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -219.710 kcal (2) G-P(sol) polarization free energy of solvation -10.931 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -230.641 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.188 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.119 kcal (6) G-S(sol) free energy of system = (1) + (5) -238.829 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds