Wall clock time and date at job start Tue Mar 9 2021 13:47:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86307 * 109.47001 * 2 1 4 4 C 1.50707 * 109.47211 * 240.00311 * 2 1 3 5 5 C 1.38264 * 119.94209 * 299.99873 * 4 2 1 6 6 C 1.38145 * 120.05437 * 180.02562 * 5 4 2 7 7 C 1.38734 * 119.94237 * 0.25588 * 6 5 4 8 8 O 1.35904 * 120.05053 * 179.71805 * 7 6 5 9 9 C 1.42903 * 116.99671 * 179.97438 * 8 7 6 10 10 C 1.50698 * 109.47143 * 180.02562 * 9 8 7 11 11 O 1.21280 * 119.99707 * 0.02562 * 10 9 8 12 12 N 1.34771 * 119.99895 * 180.02562 * 10 9 8 13 13 C 1.46503 * 119.99620 * 180.02562 * 12 10 9 14 14 C 1.53007 * 109.46864 * 179.97438 * 13 12 10 15 15 H 1.08998 * 112.84935 * 316.19607 * 14 13 12 16 16 C 1.53781 * 113.61188 * 87.50587 * 14 13 12 17 17 C 1.53777 * 87.08077 * 89.11505 * 16 14 13 18 18 O 1.42901 * 113.61548 * 270.88091 * 17 16 14 19 19 C 1.53004 * 113.68691 * 139.99101 * 17 16 14 20 20 F 1.39894 * 109.47662 * 322.46513 * 19 17 16 21 21 F 1.39907 * 109.46920 * 82.46663 * 19 17 16 22 22 F 1.39906 * 109.46908 * 202.45994 * 19 17 16 23 23 C 1.53773 * 87.08002 * 25.43247 * 17 16 14 24 24 C 1.38734 * 119.88948 * 359.51611 * 7 6 5 25 25 C 1.38137 * 119.94186 * 0.45767 * 24 7 6 26 26 H 0.96698 * 114.00273 * 59.99448 * 1 2 3 27 27 H 1.08996 * 109.47688 * 119.99798 * 2 1 3 28 28 H 1.48503 * 109.99752 * 60.00335 * 3 2 1 29 29 H 1.48502 * 109.99783 * 181.32159 * 3 2 1 30 30 H 1.07999 * 119.97244 * 359.97438 * 5 4 2 31 31 H 1.08002 * 120.02435 * 179.97438 * 6 5 4 32 32 H 1.09002 * 109.47137 * 300.00908 * 9 8 7 33 33 H 1.09001 * 109.46597 * 60.00188 * 9 8 7 34 34 H 0.97000 * 120.00601 * 359.97438 * 12 10 9 35 35 H 1.08996 * 109.47564 * 299.99576 * 13 12 10 36 36 H 1.08995 * 109.47301 * 60.00599 * 13 12 10 37 37 H 1.09008 * 113.61148 * 203.66577 * 16 14 13 38 38 H 1.09003 * 113.61506 * 334.56329 * 16 14 13 39 39 H 0.96703 * 113.99881 * 277.50617 * 18 17 16 40 40 H 1.09010 * 113.61320 * 220.01650 * 23 17 16 41 41 H 1.09006 * 113.69524 * 89.12970 * 23 17 16 42 42 H 1.08000 * 120.02383 * 180.23084 * 24 7 6 43 43 H 1.08007 * 119.97511 * 179.76987 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5966 -2.0341 -1.4482 6 6 2.0563 -2.6877 -2.5751 7 6 2.8588 -2.0162 -3.4861 8 8 3.3169 -2.6587 -4.5926 9 6 4.1377 -1.9050 -5.4872 10 6 4.5475 -2.7755 -6.6471 11 8 4.1731 -3.9277 -6.7024 12 7 5.3299 -2.2735 -7.6228 13 6 5.7278 -3.1197 -8.7506 14 6 6.6067 -2.3127 -9.7084 15 1 6.2222 -1.3094 -9.8922 16 6 8.1014 -2.3452 -9.3483 17 6 8.2053 -3.6026 -10.2275 18 8 7.9574 -4.8186 -9.5190 19 6 9.4786 -3.6571 -11.0741 20 9 9.7924 -2.3716 -11.5280 21 9 10.5340 -4.1482 -10.2978 22 9 9.2739 -4.5018 -12.1704 23 6 6.9799 -3.0739 -10.9914 24 6 3.1893 -0.6866 -3.2678 25 6 2.7266 -0.0374 -2.1396 26 1 -0.3933 0.4418 -0.7650 27 1 1.7924 -0.5138 0.8899 28 1 1.5614 2.4679 1.2086 29 1 3.5346 1.7703 -0.0322 30 1 0.9760 -2.5578 -0.7362 31 1 1.7949 -3.7218 -2.7445 32 1 3.5778 -1.0462 -5.8577 33 1 5.0268 -1.5590 -4.9601 34 1 5.6291 -1.3518 -7.5788 35 1 6.2870 -3.9790 -8.3807 36 1 4.8383 -3.4645 -9.2778 37 1 8.6624 -1.4943 -9.7350 38 1 8.2920 -2.5341 -8.2918 39 1 8.7245 -5.1560 -9.0365 40 1 6.2650 -3.8512 -11.2615 41 1 7.2328 -2.4222 -11.8278 42 1 3.8107 -0.1607 -3.9774 43 1 2.9867 0.9966 -1.9673 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664666_2989410.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:47:19 Heat of formation + Delta-G solvation = -242.762763 kcal Electronic energy + Delta-G solvation = -31730.439230 eV Core-core repulsion = 26521.993505 eV Total energy + Delta-G solvation = -5208.445725 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -51.23912 -48.78311 -48.72584 -41.62339 -41.19540 -40.30628 -38.96139 -37.12138 -36.62092 -35.22513 -32.43137 -31.73371 -30.75724 -29.12140 -27.10581 -26.82006 -26.05063 -24.00101 -23.39361 -22.38068 -21.69320 -20.58160 -20.04346 -19.53722 -19.46316 -19.39359 -18.39846 -18.02547 -17.47589 -17.26841 -16.95976 -16.79351 -16.35193 -16.21079 -15.96830 -15.91429 -15.59906 -15.54933 -15.40598 -15.16876 -15.15147 -14.92106 -14.88477 -14.69607 -14.60443 -14.47682 -14.30992 -14.04042 -13.74053 -13.54720 -13.45635 -13.39295 -12.96619 -12.45589 -12.24018 -12.11026 -12.05676 -12.03632 -11.71800 -11.58510 -11.19944 -10.96409 -10.39446 -10.16538 -10.03495 -9.21291 -4.97504 0.28496 0.31764 1.35680 1.46485 1.49119 1.54187 1.65887 2.00400 2.45353 2.59177 2.62049 2.66940 2.70300 2.93606 3.35877 3.42343 3.52855 3.57066 3.63814 3.75227 3.80936 3.85930 3.97266 4.06065 4.11581 4.31974 4.38918 4.43830 4.49200 4.51689 4.54965 4.67796 4.74850 4.79683 4.88161 4.90877 4.98118 5.13479 5.16798 5.26365 5.36203 5.50899 5.70778 6.27928 6.28330 6.49096 6.80963 7.15342 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.075 4.075 3 Si 0.784 3.216 4 C -0.161 4.161 5 C -0.061 4.061 6 C -0.168 4.168 7 C 0.121 3.879 8 O -0.321 6.321 9 C 0.037 3.963 10 C 0.510 3.490 11 O -0.576 6.576 12 N -0.705 5.705 13 C 0.132 3.868 14 C -0.098 4.098 15 H 0.129 0.871 16 C -0.143 4.143 17 C 0.056 3.944 18 O -0.523 6.523 19 C 0.429 3.571 20 F -0.175 7.175 21 F -0.189 7.189 22 F -0.189 7.189 23 C -0.114 4.114 24 C -0.199 4.199 25 C -0.076 4.076 26 H 0.395 0.605 27 H 0.102 0.898 28 H -0.305 1.305 29 H -0.280 1.280 30 H 0.131 0.869 31 H 0.125 0.875 32 H 0.130 0.870 33 H 0.126 0.874 34 H 0.423 0.577 35 H 0.071 0.929 36 H 0.059 0.941 37 H 0.122 0.878 38 H 0.097 0.903 39 H 0.400 0.600 40 H 0.089 0.911 41 H 0.127 0.873 42 H 0.167 0.833 43 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.004 9.581 -2.760 10.170 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.184 4.184 3 Si 0.690 3.310 4 C -0.162 4.162 5 C -0.080 4.080 6 C -0.186 4.186 7 C 0.076 3.924 8 O -0.235 6.235 9 C -0.041 4.041 10 C 0.296 3.704 11 O -0.455 6.455 12 N -0.360 5.360 13 C 0.009 3.991 14 C -0.116 4.116 15 H 0.147 0.853 16 C -0.181 4.181 17 C 0.013 3.987 18 O -0.332 6.332 19 C 0.375 3.625 20 F -0.157 7.157 21 F -0.170 7.170 22 F -0.171 7.171 23 C -0.152 4.152 24 C -0.217 4.217 25 C -0.093 4.093 26 H 0.245 0.755 27 H 0.119 0.881 28 H -0.233 1.233 29 H -0.207 1.207 30 H 0.149 0.851 31 H 0.143 0.857 32 H 0.148 0.852 33 H 0.144 0.856 34 H 0.261 0.739 35 H 0.089 0.911 36 H 0.077 0.923 37 H 0.140 0.860 38 H 0.116 0.884 39 H 0.252 0.748 40 H 0.108 0.892 41 H 0.145 0.855 42 H 0.185 0.815 43 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 1.730 8.887 -2.185 9.314 hybrid contribution 1.179 -1.004 0.263 1.571 sum 2.909 7.884 -1.921 8.620 Atomic orbital electron populations 1.86462 1.17534 1.82227 1.50507 1.25207 0.85136 1.11142 0.96940 0.93742 0.77726 0.74786 0.84719 1.20363 1.02071 0.95278 0.98493 1.20889 0.97248 0.94099 0.95718 1.20619 1.01530 1.01270 0.95213 1.19208 0.94583 0.92028 0.86603 1.86135 1.64851 1.40400 1.32088 1.22764 0.97622 0.94273 0.89422 1.20576 0.78354 0.87539 0.83914 1.90781 1.55843 1.20484 1.78392 1.45597 1.51161 1.16895 1.22317 1.21234 0.98072 0.93542 0.86261 1.22273 0.94123 1.01202 0.94018 0.85321 1.23822 0.97276 0.95661 1.01305 1.23872 0.91034 0.89035 0.94802 1.86639 1.41186 1.38277 1.67065 1.21656 0.87384 0.73578 0.79919 1.93176 1.93907 1.38697 1.89880 1.93175 1.61132 1.88021 1.74721 1.93201 1.95004 1.71933 1.56914 1.23248 0.93997 1.00150 0.97771 1.21512 1.05769 0.93135 1.01261 1.21075 0.95397 1.00095 0.92745 0.75515 0.88082 1.23332 1.20679 0.85080 0.85737 0.85209 0.85618 0.73917 0.91069 0.92286 0.85969 0.88398 0.74753 0.89249 0.85484 0.81536 0.82865 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.17 12.77 -148.98 -1.90 -2.08 16 2 C -0.07 0.07 2.82 71.24 0.20 0.27 16 3 Si 0.78 -3.08 29.78 68.60 2.04 -1.03 16 4 C -0.16 0.06 5.39 -19.85 -0.11 -0.05 16 5 C -0.06 -0.16 9.60 22.25 0.21 0.05 16 6 C -0.17 -0.77 9.99 22.37 0.22 -0.54 16 7 C 0.12 0.31 6.69 22.51 0.15 0.46 16 8 O -0.32 -1.60 9.67 -73.43 -0.71 -2.31 16 9 C 0.04 -0.19 5.22 71.24 0.37 0.19 16 10 C 0.51 0.62 7.91 87.66 0.69 1.32 16 11 O -0.58 -8.15 16.50 16.01 0.26 -7.89 16 12 N -0.70 4.81 5.56 -463.06 -2.57 2.24 16 13 C 0.13 -0.51 5.26 86.38 0.45 -0.05 16 14 C -0.10 0.99 3.94 -10.27 -0.04 0.95 16 15 H 0.13 -1.94 8.14 -2.39 -0.02 -1.96 16 16 C -0.14 1.42 6.91 31.12 0.21 1.64 16 17 C 0.06 -0.27 1.36 -10.27 -0.01 -0.29 16 18 O -0.52 1.22 11.44 -148.98 -1.70 -0.48 16 19 C 0.43 -0.45 2.85 71.98 0.21 -0.25 16 20 F -0.18 0.25 15.77 44.97 0.71 0.95 16 21 F -0.19 -0.09 16.65 44.97 0.75 0.65 16 22 F -0.19 -0.63 17.18 44.97 0.77 0.14 16 23 C -0.11 0.79 6.86 31.12 0.21 1.01 16 24 C -0.20 0.77 9.04 22.36 0.20 0.97 16 25 C -0.08 0.29 8.66 22.25 0.19 0.49 16 26 H 0.39 -3.13 8.70 -74.06 -0.64 -3.77 16 27 H 0.10 0.09 7.96 -2.39 -0.02 0.07 16 28 H -0.30 -1.34 7.11 99.48 0.71 -0.64 16 29 H -0.28 0.09 7.11 99.48 0.71 0.80 16 30 H 0.13 0.28 8.06 -2.91 -0.02 0.26 16 31 H 0.12 0.67 8.06 -2.91 -0.02 0.65 16 32 H 0.13 -1.58 7.65 -2.39 -0.02 -1.60 16 33 H 0.13 -1.46 7.67 -2.39 -0.02 -1.47 16 34 H 0.42 -6.50 8.47 -92.71 -0.79 -7.28 16 35 H 0.07 0.07 6.12 -2.39 -0.01 0.06 16 36 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 37 H 0.12 -1.46 7.14 -2.38 -0.02 -1.48 16 38 H 0.10 -1.01 8.10 -2.39 -0.02 -1.03 16 39 H 0.40 -2.98 8.42 -74.06 -0.62 -3.61 16 40 H 0.09 -0.40 8.10 -2.38 -0.02 -0.42 16 41 H 0.13 -1.23 7.89 -2.38 -0.02 -1.25 16 42 H 0.17 -1.95 6.30 -2.91 -0.02 -1.97 16 43 H 0.15 -1.41 4.87 -2.91 -0.01 -1.42 16 Total: 0.00 -29.66 371.82 -0.08 -29.74 By element: Atomic # 1 Polarization: -25.19 SS G_CDS: -0.90 Total: -26.09 kcal Atomic # 6 Polarization: 2.98 SS G_CDS: 3.17 Total: 6.15 kcal Atomic # 7 Polarization: 4.81 SS G_CDS: -2.57 Total: 2.24 kcal Atomic # 8 Polarization: -8.71 SS G_CDS: -4.05 Total: -12.76 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 2.23 Total: 1.75 kcal Atomic # 14 Polarization: -3.08 SS G_CDS: 2.04 Total: -1.03 kcal Total: -29.66 -0.08 -29.74 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_2989410.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -213.027 kcal (2) G-P(sol) polarization free energy of solvation -29.657 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -242.684 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.079 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.736 kcal (6) G-S(sol) free energy of system = (1) + (5) -242.763 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds