Wall clock time and date at job start Tue Mar 9 2021 13:47:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86296 * 109.47507 * 2 1 4 4 C 1.50695 * 109.47429 * 239.99205 * 2 1 3 5 5 C 1.38242 * 119.97346 * 120.02529 * 4 2 1 6 6 C 1.38282 * 120.11673 * 180.02562 * 5 4 2 7 7 C 1.38132 * 120.05359 * 359.67824 * 6 5 4 8 8 C 1.38750 * 119.94132 * 0.59630 * 7 6 5 9 9 O 1.35903 * 120.05640 * 179.70177 * 8 7 6 10 10 C 1.42889 * 116.99819 * 359.72771 * 9 8 7 11 11 C 1.53005 * 109.47155 * 179.97438 * 10 9 8 12 12 C 1.53002 * 109.46905 * 179.97438 * 11 10 9 13 13 C 1.50705 * 109.46633 * 180.02562 * 12 11 10 14 14 O 1.21283 * 120.00183 * 359.97438 * 13 12 11 15 15 N 1.34774 * 119.99904 * 180.02562 * 13 12 11 16 16 C 1.46502 * 120.00341 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47253 * 179.97438 * 16 15 13 18 18 H 1.08999 * 112.84865 * 43.81251 * 17 16 15 19 19 C 1.53787 * 113.61109 * 175.00262 * 17 16 15 20 20 C 1.53776 * 87.08000 * 89.12318 * 19 17 16 21 21 O 1.42907 * 113.61212 * 270.79665 * 20 19 17 22 22 C 1.52997 * 113.61638 * 139.98096 * 20 19 17 23 23 F 1.39905 * 109.47157 * 59.99612 * 22 20 19 24 24 F 1.39900 * 109.47010 * 300.00003 * 22 20 19 25 25 F 1.39897 * 109.47422 * 179.97438 * 22 20 19 26 26 C 1.53772 * 113.62109 * 272.50064 * 17 16 15 27 27 C 1.38162 * 119.97373 * 300.00739 * 4 2 1 28 28 H 0.96702 * 113.99852 * 60.00450 * 1 2 3 29 29 H 1.09011 * 109.46818 * 119.99551 * 2 1 3 30 30 H 1.48499 * 110.00266 * 59.99374 * 3 2 1 31 31 H 1.48499 * 110.00113 * 181.31903 * 3 2 1 32 32 H 1.08005 * 119.94011 * 359.97438 * 5 4 2 33 33 H 1.07999 * 119.97674 * 179.97438 * 6 5 4 34 34 H 1.07995 * 120.03100 * 180.32698 * 7 6 5 35 35 H 1.08994 * 109.47632 * 60.00155 * 10 9 8 36 36 H 1.09006 * 109.47083 * 299.99858 * 10 9 8 37 37 H 1.09001 * 109.46821 * 59.99996 * 11 10 9 38 38 H 1.08991 * 109.46993 * 299.99963 * 11 10 9 39 39 H 1.08994 * 109.47660 * 60.00294 * 12 11 10 40 40 H 1.08999 * 109.47475 * 299.99485 * 12 11 10 41 41 H 0.97000 * 119.99944 * 359.97438 * 15 13 12 42 42 H 1.09001 * 109.46482 * 60.00287 * 16 15 13 43 43 H 1.08991 * 109.47167 * 300.00355 * 16 15 13 44 44 H 1.09001 * 113.61522 * 334.56604 * 19 17 16 45 45 H 1.09004 * 113.68887 * 203.68088 * 19 17 16 46 46 H 0.96698 * 113.99612 * 178.47097 * 21 20 19 47 47 H 1.08998 * 113.61809 * 156.33412 * 26 17 16 48 48 H 1.09003 * 113.61577 * 25.43452 * 26 17 16 49 49 H 1.08004 * 120.02988 * 0.04210 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 2.7266 -0.0384 -2.1397 6 6 3.1888 -0.6874 -3.2699 7 6 2.8622 -2.0115 -3.4896 8 6 2.0596 -2.6867 -2.5813 9 8 1.7318 -3.9876 -2.7981 10 6 2.2438 -4.5963 -3.9852 11 6 1.7734 -6.0505 -4.0564 12 6 2.3211 -6.7020 -5.3278 13 6 1.8571 -8.1341 -5.3982 14 8 1.1578 -8.5890 -4.5179 15 7 2.2203 -8.9097 -6.4389 16 6 1.7698 -10.3021 -6.5071 17 6 2.3173 -10.9536 -7.7785 18 1 3.3649 -10.7130 -7.9600 19 6 2.0026 -12.4551 -7.8859 20 6 0.6974 -12.0508 -8.5915 21 8 -0.3952 -11.8373 -7.6955 22 6 0.3316 -12.9560 -9.7694 23 9 0.1714 -14.2697 -9.3158 24 9 1.3529 -12.9139 -10.7246 25 9 -0.8640 -12.5126 -10.3447 26 6 1.4161 -10.7569 -9.0088 27 6 1.5972 -2.0333 -1.4483 28 1 -0.3933 0.4417 -0.7651 29 1 1.7923 -0.5138 0.8901 30 1 1.5615 2.4679 1.2084 31 1 3.5347 1.7701 -0.0321 32 1 2.9866 0.9956 -1.9675 33 1 3.8095 -0.1600 -3.9791 34 1 3.2278 -2.5195 -4.3697 35 1 3.3332 -4.5678 -3.9674 36 1 1.8804 -4.0533 -4.8577 37 1 0.6839 -6.0794 -4.0741 38 1 2.1371 -6.5931 -3.1840 39 1 3.4105 -6.6731 -5.3107 40 1 1.9569 -6.1593 -6.2001 41 1 2.7799 -8.5461 -7.1427 42 1 0.6803 -10.3309 -6.5247 43 1 2.1335 -10.8448 -5.6347 44 1 1.8461 -12.9385 -6.9216 45 1 2.6938 -13.0027 -8.5266 46 1 -1.2127 -11.5601 -8.1313 47 1 1.9475 -10.8389 -9.9570 48 1 0.7860 -9.8693 -8.9512 49 1 0.9756 -2.5579 -0.7378 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:47:30 Heat of formation + Delta-G solvation = -255.283584 kcal Electronic energy + Delta-G solvation = -34979.972834 eV Core-core repulsion = 29459.908927 eV Total energy + Delta-G solvation = -5520.063906 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.153 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -51.25322 -48.80830 -48.70134 -41.56733 -41.25707 -40.44885 -39.15669 -37.28042 -36.76902 -35.22845 -34.92634 -32.44253 -31.33229 -30.30596 -28.55206 -27.38658 -27.01933 -26.48006 -23.81659 -23.63308 -23.20787 -21.87415 -21.50832 -20.69043 -20.12837 -19.53827 -19.43824 -19.16353 -18.12197 -17.79173 -17.56192 -17.44443 -17.15850 -17.00825 -16.80434 -16.59664 -16.27835 -16.09824 -15.73730 -15.55294 -15.42222 -15.31979 -15.17017 -15.05153 -14.89384 -14.87415 -14.80274 -14.61283 -14.52421 -14.21058 -14.12648 -14.02648 -13.70528 -13.40418 -13.34537 -13.08916 -13.04160 -12.75026 -12.66094 -12.40528 -12.33122 -12.24662 -11.90452 -11.81874 -11.68050 -11.59370 -11.35093 -10.88856 -10.48277 -10.12325 -9.89447 -9.21595 -5.02490 0.22763 0.43130 1.28821 1.45127 1.61103 1.64354 1.83100 1.97995 2.22731 2.32634 2.50514 2.55802 2.69777 2.75661 3.14199 3.29595 3.39075 3.46723 3.51940 3.63871 3.65285 3.76265 3.79833 3.88576 4.01071 4.10062 4.14079 4.15153 4.20787 4.22055 4.24613 4.27090 4.38772 4.42225 4.47221 4.55843 4.56119 4.63580 4.66544 4.72136 4.93977 4.98992 4.99593 5.13741 5.28977 5.34292 5.38454 5.45769 5.71287 6.00283 6.38098 6.42715 6.58582 7.17360 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.070 4.070 3 Si 0.694 3.306 4 C -0.081 4.081 5 C -0.157 4.157 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.132 3.868 9 O -0.311 6.311 10 C 0.060 3.940 11 C -0.106 4.106 12 C -0.137 4.137 13 C 0.513 3.487 14 O -0.532 6.532 15 N -0.732 5.732 16 C 0.130 3.870 17 C -0.112 4.112 18 H 0.099 0.901 19 C -0.109 4.109 20 C 0.062 3.938 21 O -0.507 6.507 22 C 0.433 3.567 23 F -0.174 7.174 24 F -0.175 7.175 25 F -0.183 7.183 26 C -0.154 4.154 27 C -0.126 4.126 28 H 0.379 0.621 29 H 0.115 0.885 30 H -0.255 1.255 31 H -0.258 1.258 32 H 0.128 0.872 33 H 0.130 0.870 34 H 0.129 0.871 35 H 0.064 0.936 36 H 0.064 0.936 37 H 0.084 0.916 38 H 0.083 0.917 39 H 0.098 0.902 40 H 0.098 0.902 41 H 0.400 0.600 42 H 0.090 0.910 43 H 0.073 0.927 44 H 0.100 0.900 45 H 0.113 0.887 46 H 0.392 0.608 47 H 0.109 0.891 48 H 0.093 0.907 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.963 3.410 -6.809 8.585 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.181 4.181 3 Si 0.595 3.405 4 C -0.081 4.081 5 C -0.175 4.175 6 C -0.092 4.092 7 C -0.224 4.224 8 C 0.087 3.913 9 O -0.225 6.225 10 C -0.016 4.016 11 C -0.144 4.144 12 C -0.177 4.177 13 C 0.299 3.701 14 O -0.408 6.408 15 N -0.385 5.385 16 C 0.007 3.993 17 C -0.131 4.131 18 H 0.117 0.883 19 C -0.147 4.147 20 C 0.018 3.982 21 O -0.314 6.314 22 C 0.378 3.622 23 F -0.156 7.156 24 F -0.157 7.157 25 F -0.164 7.164 26 C -0.192 4.192 27 C -0.145 4.145 28 H 0.227 0.773 29 H 0.133 0.867 30 H -0.180 1.180 31 H -0.183 1.183 32 H 0.145 0.855 33 H 0.148 0.852 34 H 0.147 0.853 35 H 0.082 0.918 36 H 0.083 0.917 37 H 0.102 0.898 38 H 0.102 0.898 39 H 0.116 0.884 40 H 0.116 0.884 41 H 0.235 0.765 42 H 0.108 0.892 43 H 0.092 0.908 44 H 0.118 0.882 45 H 0.131 0.869 46 H 0.242 0.758 47 H 0.127 0.873 48 H 0.111 0.889 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 4.315 3.016 -4.649 7.023 hybrid contribution 0.018 -0.607 -1.283 1.420 sum 4.332 2.409 -5.932 7.730 Atomic orbital electron populations 1.86516 1.16921 1.81720 1.49212 1.25121 0.85389 1.10238 0.97352 0.94625 0.80912 0.77843 0.87074 1.20143 0.97473 0.93915 0.96575 1.20921 1.01103 0.99840 0.95611 1.20909 0.97848 0.93725 0.96674 1.21311 1.03486 0.96490 1.01152 1.19028 0.94359 0.83486 0.94430 1.86088 1.70889 1.22400 1.43093 1.22823 0.98556 0.93924 0.86247 1.21233 1.03065 0.92268 0.97788 1.21524 1.03007 0.92940 1.00260 1.20556 0.80154 0.87981 0.81399 1.90772 1.37038 1.74886 1.38079 1.45987 1.54384 1.12683 1.25474 1.21295 1.01126 0.80775 0.96130 1.22397 1.00537 0.95640 0.94510 0.88257 1.23122 0.91618 0.96995 1.02949 1.23638 0.90351 0.95787 0.88438 1.86655 1.21667 1.89890 1.33205 1.21301 0.74775 0.81017 0.85111 1.93233 1.95311 1.38289 1.88743 1.93185 1.59567 1.96342 1.66576 1.93189 1.47729 1.89126 1.86392 1.23807 0.98812 0.96659 0.99872 1.20276 1.03098 0.93990 0.97106 0.77324 0.86732 1.17979 1.18304 0.85459 0.85229 0.85271 0.91816 0.91740 0.89760 0.89797 0.88387 0.88387 0.76546 0.89217 0.90849 0.88186 0.86892 0.75761 0.87307 0.88882 0.84783 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.47 12.77 -35.23 -0.45 -0.92 16 2 C -0.07 -0.03 2.82 36.00 0.10 0.08 16 3 Si 0.69 -0.60 29.79 -169.99 -5.06 -5.66 16 4 C -0.08 -0.07 5.39 -104.65 -0.56 -0.64 16 5 C -0.16 0.03 8.67 -39.56 -0.34 -0.32 16 6 C -0.07 0.04 10.04 -39.60 -0.40 -0.36 16 7 C -0.21 -0.03 9.04 -39.43 -0.36 -0.39 16 8 C 0.13 0.27 6.69 -39.21 -0.26 0.01 16 9 O -0.31 -0.72 10.14 -19.44 -0.20 -0.92 16 10 C 0.06 -0.07 4.74 37.16 0.18 0.11 16 11 C -0.11 0.06 4.87 -26.73 -0.13 -0.07 16 12 C -0.14 0.43 5.70 -27.88 -0.16 0.27 16 13 C 0.51 0.04 7.83 -10.98 -0.09 -0.04 16 14 O -0.53 -2.68 15.98 5.55 0.09 -2.59 16 15 N -0.73 1.85 5.56 -60.29 -0.33 1.52 16 16 C 0.13 -0.20 5.26 -4.04 -0.02 -0.22 16 17 C -0.11 0.43 3.94 -89.81 -0.35 0.08 16 18 H 0.10 -0.53 8.14 -51.93 -0.42 -0.95 16 19 C -0.11 0.32 6.86 -25.92 -0.18 0.14 16 20 C 0.06 -0.13 1.35 -89.81 -0.12 -0.25 16 21 O -0.51 0.74 11.44 -35.23 -0.40 0.33 16 22 C 0.43 -0.17 2.85 37.16 0.11 -0.07 16 23 F -0.17 -0.26 17.18 2.25 0.04 -0.22 16 24 F -0.18 0.03 15.75 2.25 0.04 0.07 16 25 F -0.18 -0.04 16.67 2.25 0.04 0.00 16 26 C -0.15 0.60 6.91 -25.92 -0.18 0.42 16 27 C -0.13 -0.29 9.55 -39.43 -0.38 -0.66 16 28 H 0.38 -1.16 8.70 45.56 0.40 -0.77 16 29 H 0.12 0.10 7.96 -51.92 -0.41 -0.32 16 30 H -0.25 -0.60 7.11 56.52 0.40 -0.20 16 31 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 32 H 0.13 -0.26 4.87 -52.48 -0.26 -0.51 16 33 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 34 H 0.13 -0.26 6.30 -52.49 -0.33 -0.59 16 35 H 0.06 -0.16 7.65 -51.93 -0.40 -0.55 16 36 H 0.06 -0.17 7.67 -51.93 -0.40 -0.57 16 37 H 0.08 0.09 8.10 -51.93 -0.42 -0.34 16 38 H 0.08 0.09 8.10 -51.93 -0.42 -0.33 16 39 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 40 H 0.10 -0.51 8.14 -51.93 -0.42 -0.93 16 41 H 0.40 -2.22 8.47 -40.82 -0.35 -2.57 16 42 H 0.09 0.02 6.12 -51.93 -0.32 -0.30 16 43 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 44 H 0.10 -0.23 8.10 -51.93 -0.42 -0.65 16 45 H 0.11 -0.44 7.88 -51.93 -0.41 -0.85 16 46 H 0.39 -1.63 8.46 45.56 0.39 -1.24 16 47 H 0.11 -0.48 7.13 -51.93 -0.37 -0.85 16 48 H 0.09 -0.38 8.10 -51.93 -0.42 -0.80 16 49 H 0.13 0.36 8.06 -52.48 -0.42 -0.06 16 LS Contribution 414.30 15.07 6.24 6.24 Total: 0.00 -10.51 414.30 -9.02 -19.53 By element: Atomic # 1 Polarization: -9.59 SS G_CDS: -5.87 Total: -15.46 kcal Atomic # 6 Polarization: 1.22 SS G_CDS: -3.14 Total: -1.93 kcal Atomic # 7 Polarization: 1.85 SS G_CDS: -0.33 Total: 1.52 kcal Atomic # 8 Polarization: -3.13 SS G_CDS: -0.96 Total: -4.09 kcal Atomic # 9 Polarization: -0.26 SS G_CDS: 0.11 Total: -0.15 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -5.06 Total: -5.66 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -10.51 -9.02 -19.53 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -235.755 kcal (2) G-P(sol) polarization free energy of solvation -10.506 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -246.260 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.023 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.529 kcal (6) G-S(sol) free energy of system = (1) + (5) -255.284 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds