Wall clock time and date at job start Tue Mar 9 2021 13:48:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.47460 * 2 1 4 4 C 1.50698 * 109.47196 * 120.00441 * 2 1 3 5 5 C 1.38246 * 119.97131 * 245.02030 * 4 2 1 6 6 C 1.38291 * 120.11220 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05431 * 359.76953 * 6 5 4 8 8 C 1.38753 * 119.94139 * 0.50753 * 7 6 5 9 9 O 1.35904 * 120.05556 * 179.74748 * 8 7 6 10 10 C 1.42903 * 116.99560 * 359.71845 * 9 8 7 11 11 C 1.50706 * 109.47072 * 180.02562 * 10 9 8 12 12 O 1.21280 * 119.99418 * 0.02562 * 11 10 9 13 13 N 1.34777 * 120.00152 * 180.02562 * 11 10 9 14 14 C 1.46497 * 119.99975 * 180.02562 * 13 11 10 15 15 C 1.52999 * 109.46995 * 179.97438 * 14 13 11 16 16 H 1.09007 * 112.84940 * 316.19167 * 15 14 13 17 17 C 1.53778 * 113.61594 * 87.50097 * 15 14 13 18 18 C 1.53784 * 87.08081 * 89.11644 * 17 15 14 19 19 O 1.42895 * 113.61275 * 270.88665 * 18 17 15 20 20 C 1.52992 * 113.61673 * 139.98135 * 18 17 15 21 21 F 1.39906 * 109.47022 * 322.50499 * 20 18 17 22 22 F 1.39904 * 109.47275 * 82.50069 * 20 18 17 23 23 F 1.39902 * 109.47492 * 202.50375 * 20 18 17 24 24 C 1.53778 * 113.61355 * 185.00263 * 15 14 13 25 25 C 1.38170 * 119.97464 * 64.99438 * 4 2 1 26 26 H 0.96703 * 114.00086 * 300.00213 * 1 2 3 27 27 H 1.09007 * 109.46973 * 240.00138 * 2 1 3 28 28 H 1.48501 * 109.99923 * 300.00405 * 3 2 1 29 29 H 1.48498 * 109.99612 * 61.32064 * 3 2 1 30 30 H 1.07995 * 119.94347 * 359.97415 * 5 4 2 31 31 H 1.08001 * 119.97066 * 180.02562 * 6 5 4 32 32 H 1.07993 * 120.02521 * 180.27099 * 7 6 5 33 33 H 1.09005 * 109.47264 * 60.00602 * 10 9 8 34 34 H 1.08997 * 109.47609 * 300.00477 * 10 9 8 35 35 H 0.97002 * 119.99516 * 359.97438 * 13 11 10 36 36 H 1.09001 * 109.47261 * 60.00052 * 14 13 11 37 37 H 1.08997 * 109.47067 * 299.99991 * 14 13 11 38 38 H 1.08993 * 113.61229 * 334.56967 * 17 15 14 39 39 H 1.09000 * 113.61263 * 203.66617 * 17 15 14 40 40 H 0.96703 * 114.00032 * 277.49449 * 19 18 17 41 41 H 1.08998 * 113.61879 * 156.33575 * 24 15 14 42 42 H 1.08999 * 113.61887 * 25.42682 * 24 15 14 43 43 H 1.07997 * 120.02184 * 0.04755 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6384 -0.0117 2.1911 6 6 3.1003 -0.6607 3.3216 7 6 2.8519 -2.0082 3.4957 8 6 2.1475 -2.7130 2.5301 9 8 1.9064 -4.0401 2.6966 10 6 2.4127 -4.6470 3.8872 11 6 2.0518 -6.1102 3.8977 12 8 1.4233 -6.5863 2.9762 13 7 2.4274 -6.8895 4.9311 14 6 2.0770 -8.3120 4.9411 15 6 2.6190 -8.9618 6.2158 16 1 3.6382 -8.6526 6.4481 17 6 1.6571 -8.8683 7.4119 18 6 1.0518 -10.1968 6.9283 19 8 -0.0160 -10.0324 5.9931 20 6 0.7058 -11.1620 8.0638 21 9 1.6821 -11.0765 9.0623 22 9 -0.5409 -10.8230 8.6004 23 9 0.6600 -12.4691 7.5671 24 6 2.4104 -10.4845 6.2676 25 6 1.6845 -2.0596 1.3976 26 1 -0.3933 0.4417 0.7651 27 1 1.7923 -0.5138 -0.8901 28 1 1.5615 2.4679 -1.2085 29 1 1.5880 2.4584 1.2243 30 1 2.8303 1.0428 2.0586 31 1 3.6520 -0.1125 4.0709 32 1 3.2091 -2.5136 4.3807 33 1 1.9759 -4.1585 4.7582 34 1 3.4970 -4.5404 3.9165 35 1 2.9304 -6.5087 5.6680 36 1 2.5149 -8.8001 4.0704 37 1 0.9928 -8.4193 4.9108 38 1 0.9669 -8.0268 7.3523 39 1 2.1545 -8.9415 8.3790 40 1 -0.8731 -9.8512 6.4027 41 1 3.1137 -10.9996 6.9219 42 1 2.3283 -10.9477 5.2844 43 1 1.1324 -2.6051 0.6466 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_4860298.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:02 Heat of formation + Delta-G solvation = -238.092407 kcal Electronic energy + Delta-G solvation = -31812.329258 eV Core-core repulsion = 26604.086054 eV Total energy + Delta-G solvation = -5208.243203 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -51.26626 -48.81973 -48.71584 -41.70558 -41.34014 -40.32799 -38.95213 -37.32033 -36.74432 -35.28539 -32.53426 -31.86718 -30.59492 -29.09016 -27.40294 -27.04354 -26.50164 -23.72050 -23.62509 -22.59290 -21.64201 -20.76616 -20.16463 -19.55474 -19.45618 -19.35925 -18.48126 -17.82162 -17.55907 -17.43755 -17.25408 -16.96693 -16.68459 -16.34071 -16.19639 -16.05585 -15.60628 -15.51847 -15.44110 -15.18142 -15.13438 -14.96379 -14.89994 -14.83738 -14.64622 -14.62590 -14.18246 -14.11892 -13.94036 -13.71165 -13.52436 -13.14533 -13.00815 -12.68355 -12.59109 -12.37226 -12.18759 -11.99419 -11.83626 -11.58602 -11.36934 -10.92330 -10.63296 -10.21996 -9.97729 -9.30010 -4.96000 0.16658 0.37329 1.23845 1.41007 1.43548 1.46380 1.59260 1.95994 2.23231 2.47232 2.49194 2.55099 2.62921 2.74193 3.11323 3.26373 3.37344 3.38535 3.43875 3.60493 3.60860 3.73666 3.83983 3.84722 3.98033 4.08120 4.16305 4.20678 4.24422 4.33330 4.45561 4.51686 4.54290 4.61107 4.63602 4.68550 4.93657 4.94493 5.19493 5.22549 5.31924 5.40815 5.61595 5.99178 6.18993 6.33905 6.40924 7.05321 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.078 4.078 3 Si 0.692 3.308 4 C -0.077 4.077 5 C -0.155 4.155 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.129 3.871 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.515 3.485 12 O -0.509 6.509 13 N -0.728 5.728 14 C 0.132 3.868 15 C -0.112 4.112 16 H 0.101 0.899 17 C -0.154 4.154 18 C 0.061 3.939 19 O -0.507 6.507 20 C 0.433 3.567 21 F -0.175 7.175 22 F -0.183 7.183 23 F -0.174 7.174 24 C -0.109 4.109 25 C -0.120 4.120 26 H 0.376 0.624 27 H 0.121 0.879 28 H -0.257 1.257 29 H -0.260 1.260 30 H 0.130 0.870 31 H 0.131 0.869 32 H 0.130 0.870 33 H 0.094 0.906 34 H 0.095 0.905 35 H 0.402 0.598 36 H 0.076 0.924 37 H 0.092 0.908 38 H 0.093 0.907 39 H 0.109 0.891 40 H 0.392 0.608 41 H 0.114 0.886 42 H 0.100 0.900 43 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.945 2.676 5.431 8.485 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.187 4.187 3 Si 0.593 3.407 4 C -0.078 4.078 5 C -0.173 4.173 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.084 3.916 9 O -0.200 6.200 10 C -0.038 4.038 11 C 0.299 3.701 12 O -0.382 6.382 13 N -0.382 5.382 14 C 0.010 3.990 15 C -0.131 4.131 16 H 0.119 0.881 17 C -0.192 4.192 18 C 0.017 3.983 19 O -0.314 6.314 20 C 0.378 3.622 21 F -0.156 7.156 22 F -0.164 7.164 23 F -0.156 7.156 24 C -0.146 4.146 25 C -0.139 4.139 26 H 0.224 0.776 27 H 0.138 0.862 28 H -0.182 1.182 29 H -0.185 1.185 30 H 0.147 0.853 31 H 0.149 0.851 32 H 0.148 0.852 33 H 0.112 0.888 34 H 0.113 0.887 35 H 0.236 0.764 36 H 0.094 0.906 37 H 0.110 0.890 38 H 0.112 0.888 39 H 0.127 0.873 40 H 0.243 0.757 41 H 0.132 0.868 42 H 0.119 0.881 43 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 5.684 2.570 3.646 7.226 hybrid contribution -1.268 -0.204 1.970 2.352 sum 4.416 2.366 5.616 7.526 Atomic orbital electron populations 1.86628 1.17473 1.79978 1.49252 1.25109 0.84143 1.11174 0.98306 0.94880 0.91606 0.74101 0.80106 1.20092 0.97771 0.93503 0.96432 1.20996 1.01256 1.00003 0.95039 1.20906 0.97589 0.93586 0.97015 1.21296 1.04789 0.96069 1.00289 1.19043 0.95398 0.82434 0.94769 1.86180 1.73745 1.20075 1.40047 1.22456 1.00679 0.91877 0.88755 1.20007 0.80052 0.87463 0.82589 1.90809 1.37827 1.74709 1.34888 1.45769 1.58817 1.10208 1.23430 1.21328 1.02231 0.79065 0.96418 1.22393 1.00321 0.95785 0.94605 0.88122 1.23817 0.99348 0.96118 0.99905 1.23646 0.91225 0.94893 0.88499 1.86651 1.19450 1.93155 1.32193 1.21290 0.74663 0.81922 0.84323 1.93188 1.62727 1.96123 1.63609 1.93192 1.43422 1.92101 1.87707 1.93234 1.96055 1.39030 1.87234 1.23127 0.91208 0.96774 1.03538 1.20288 1.02754 0.93651 0.97192 0.77622 0.86162 1.18208 1.18524 0.85297 0.85107 0.85247 0.88821 0.88708 0.76417 0.90571 0.89000 0.88847 0.87257 0.75719 0.86823 0.88121 0.84612 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.96 12.83 -35.23 -0.45 -1.42 16 2 C -0.08 -0.01 2.80 36.00 0.10 0.09 16 3 Si 0.69 -0.69 29.88 -169.99 -5.08 -5.77 16 4 C -0.08 -0.05 5.35 -104.64 -0.56 -0.61 16 5 C -0.16 0.09 8.67 -39.56 -0.34 -0.26 16 6 C -0.07 0.08 10.04 -39.60 -0.40 -0.31 16 7 C -0.21 0.14 9.04 -39.43 -0.36 -0.22 16 8 C 0.13 0.22 6.69 -39.22 -0.26 -0.04 16 9 O -0.29 -0.81 9.67 -39.35 -0.38 -1.19 16 10 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 11 C 0.51 0.49 7.91 -10.98 -0.09 0.40 16 12 O -0.51 -3.25 16.50 -14.35 -0.24 -3.49 16 13 N -0.73 1.90 5.56 -60.29 -0.33 1.56 16 14 C 0.13 -0.23 5.26 -4.04 -0.02 -0.25 16 15 C -0.11 0.47 3.94 -89.81 -0.35 0.12 16 16 H 0.10 -0.58 8.14 -51.93 -0.42 -1.00 16 17 C -0.15 0.63 6.90 -25.92 -0.18 0.45 16 18 C 0.06 -0.14 1.36 -89.81 -0.12 -0.26 16 19 O -0.51 0.78 11.44 -35.23 -0.40 0.38 16 20 C 0.43 -0.23 2.85 37.15 0.11 -0.12 16 21 F -0.18 0.06 15.75 2.25 0.04 0.09 16 22 F -0.18 -0.03 16.65 2.25 0.04 0.01 16 23 F -0.17 -0.23 17.18 2.25 0.04 -0.19 16 24 C -0.11 0.34 6.86 -25.92 -0.18 0.17 16 25 C -0.12 -0.26 9.62 -39.43 -0.38 -0.64 16 26 H 0.38 -0.42 8.70 45.56 0.40 -0.03 16 27 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 28 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 29 H -0.26 -0.19 7.01 56.52 0.40 0.21 16 30 H 0.13 -0.28 4.83 -52.49 -0.25 -0.54 16 31 H 0.13 -0.45 8.06 -52.49 -0.42 -0.87 16 32 H 0.13 -0.44 6.30 -52.49 -0.33 -0.77 16 33 H 0.09 -0.37 7.65 -51.93 -0.40 -0.76 16 34 H 0.10 -0.38 7.67 -51.93 -0.40 -0.78 16 35 H 0.40 -2.42 8.47 -40.82 -0.35 -2.77 16 36 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.09 0.01 6.12 -51.93 -0.32 -0.31 16 38 H 0.09 -0.40 8.10 -51.93 -0.42 -0.82 16 39 H 0.11 -0.51 7.13 -51.93 -0.37 -0.88 16 40 H 0.39 -1.64 8.43 45.56 0.38 -1.26 16 41 H 0.11 -0.48 7.88 -51.93 -0.41 -0.88 16 42 H 0.10 -0.25 8.10 -51.93 -0.42 -0.68 16 43 H 0.14 0.39 8.06 -52.49 -0.42 -0.04 16 LS Contribution 371.84 15.07 5.60 5.60 Total: 0.00 -10.86 371.84 -8.21 -19.07 By element: Atomic # 1 Polarization: -9.11 SS G_CDS: -4.19 Total: -13.30 kcal Atomic # 6 Polarization: 1.49 SS G_CDS: -2.84 Total: -1.35 kcal Atomic # 7 Polarization: 1.90 SS G_CDS: -0.33 Total: 1.56 kcal Atomic # 8 Polarization: -4.25 SS G_CDS: -1.47 Total: -5.72 kcal Atomic # 9 Polarization: -0.20 SS G_CDS: 0.11 Total: -0.09 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.08 Total: -5.77 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -10.86 -8.21 -19.07 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_4860298.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -219.022 kcal (2) G-P(sol) polarization free energy of solvation -10.862 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -229.884 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.208 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.070 kcal (6) G-S(sol) free energy of system = (1) + (5) -238.092 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds