Wall clock time and date at job start Tue Mar 9 2021 13:48:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35893 * 117.00114 * 2 1 4 4 C 1.38613 * 120.02853 * 180.27923 * 3 2 1 5 5 C 1.38657 * 119.89241 * 180.21102 * 4 3 2 6 6 O 1.35894 * 120.03169 * 179.79220 * 5 4 3 7 7 C 1.42905 * 116.99740 * 359.72154 * 6 5 4 8 8 C 1.50691 * 109.47211 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00190 * 0.02562 * 8 7 6 10 10 N 1.34775 * 120.00270 * 180.02562 * 8 7 6 11 11 C 1.46504 * 120.00207 * 180.02562 * 10 8 7 12 12 C 1.53003 * 109.46983 * 179.97438 * 11 10 8 13 13 H 1.09002 * 112.85017 * 314.66585 * 12 11 10 14 14 C 1.53786 * 113.61503 * 85.86203 * 12 11 10 15 15 C 1.53962 * 87.01719 * 89.22788 * 14 12 11 16 16 O 1.42905 * 113.61357 * 270.80087 * 15 14 12 17 17 C 1.52994 * 113.66220 * 139.93548 * 15 14 12 18 18 F 1.39894 * 109.47554 * 322.43826 * 17 15 14 19 19 F 1.39895 * 109.47319 * 82.44432 * 17 15 14 20 20 F 1.39904 * 109.46654 * 202.44022 * 17 15 14 21 21 C 1.53781 * 113.61337 * 183.46996 * 12 11 10 22 22 C 1.38750 * 119.94449 * 359.51539 * 5 4 3 23 23 C 1.50698 * 119.97518 * 180.27921 * 22 5 4 24 24 O 1.42892 * 109.47542 * 74.99918 * 23 22 5 25 25 Si 1.86302 * 109.47178 * 195.00270 * 23 22 5 26 26 C 1.38199 * 120.05498 * 0.25374 * 22 5 4 27 27 C 1.38161 * 120.10708 * 359.97438 * 26 22 5 28 28 H 1.08994 * 109.47204 * 59.99659 * 1 2 3 29 29 H 1.08997 * 109.47206 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.46652 * 299.99585 * 1 2 3 31 31 H 1.08004 * 120.05454 * 359.97438 * 4 3 2 32 32 H 1.09000 * 109.47003 * 60.00036 * 7 6 5 33 33 H 1.08994 * 109.47098 * 300.00525 * 7 6 5 34 34 H 0.96999 * 120.00146 * 359.97438 * 10 8 7 35 35 H 1.09000 * 109.47232 * 59.99775 * 11 10 8 36 36 H 1.08997 * 109.47041 * 299.99591 * 11 10 8 37 37 H 1.08993 * 113.61491 * 203.74909 * 14 12 11 38 38 H 1.09000 * 113.61138 * 334.65247 * 14 12 11 39 39 H 0.96698 * 113.99905 * 277.53772 * 16 15 14 40 40 H 1.09001 * 113.61695 * 25.34825 * 21 12 11 41 41 H 1.08996 * 113.61580 * 156.17103 * 21 12 11 42 42 H 1.09004 * 109.46805 * 314.99730 * 23 22 5 43 43 H 0.96696 * 113.99983 * 60.00050 * 24 23 22 44 44 H 1.48501 * 110.00145 * 180.02562 * 25 23 22 45 45 H 1.48510 * 109.99830 * 301.31199 * 25 23 22 46 46 H 1.08000 * 119.94878 * 180.02562 * 26 22 5 47 47 H 1.08002 * 119.96955 * 180.02562 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4302 1.2840 -0.0058 5 6 4.0568 2.5209 -0.0014 6 8 5.4137 2.5960 -0.0029 7 6 6.1317 1.3604 -0.0029 8 6 7.6125 1.6400 -0.0052 9 8 8.0135 2.7845 -0.0062 10 7 8.4912 0.6181 -0.0061 11 6 9.9308 0.8899 -0.0078 12 6 10.6996 -0.4330 -0.0079 13 1 10.3025 -1.1533 0.7073 14 6 10.9197 -1.0174 -1.4133 15 6 12.2238 -0.2005 -1.4611 16 8 12.0541 1.1187 -1.9837 17 6 13.3936 -0.9483 -2.1039 18 9 13.3426 -2.2974 -1.7374 19 9 13.3079 -0.8397 -3.4960 20 9 14.6000 -0.3914 -1.6661 21 6 12.2252 -0.2588 0.0756 22 6 3.2973 3.6821 -0.0013 23 6 3.9776 5.0268 -0.0028 24 8 4.5024 5.2937 -1.3048 25 14 2.7445 6.3471 0.4524 26 6 1.9174 3.6065 -0.0003 27 6 1.2907 2.3752 0.0000 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3633 -1.0276 -0.0005 30 1 -0.3632 0.5138 0.8900 31 1 4.0197 0.3791 -0.0100 32 1 5.8691 0.7876 -0.8922 33 1 5.8709 0.7886 0.8877 34 1 8.1706 -0.2973 -0.0049 35 1 10.1936 1.4624 0.8818 36 1 10.1915 1.4621 -0.8982 37 1 11.0794 -2.0956 -1.4176 38 1 10.1750 -0.6959 -2.1414 39 1 12.0523 1.1618 -2.9498 40 1 12.5331 0.6742 0.5477 41 1 12.7425 -1.1287 0.4803 42 1 4.7908 5.0233 0.7231 43 1 3.8331 5.3117 -2.0025 44 1 3.4029 7.6782 0.4538 45 1 1.6147 6.3410 -0.5115 46 1 1.3278 4.5114 -0.0006 47 1 0.2122 2.3187 0.0004 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_4974312.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:08 Heat of formation + Delta-G solvation = -270.130895 kcal Electronic energy + Delta-G solvation = -36832.150208 eV Core-core repulsion = 31148.297901 eV Total energy + Delta-G solvation = -5683.852307 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.137 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -51.24150 -48.79534 -48.69048 -41.83478 -41.47131 -40.56588 -39.72297 -38.25375 -36.93008 -36.69117 -35.22229 -32.29903 -31.61386 -30.58110 -29.13513 -28.51409 -27.37056 -26.74135 -26.06913 -23.81860 -23.37873 -22.46697 -21.67577 -20.74724 -20.14079 -19.96031 -19.52495 -19.43032 -18.53813 -17.99821 -17.81693 -17.56546 -17.35531 -17.26896 -16.78318 -16.72576 -16.43978 -16.29835 -16.12952 -15.82637 -15.56910 -15.56745 -15.37627 -15.15634 -15.14797 -15.01428 -14.88407 -14.81932 -14.59279 -14.53930 -14.46031 -14.08001 -13.70609 -13.61369 -13.53184 -13.40372 -13.13420 -13.12803 -12.66439 -12.54347 -12.33460 -12.27451 -11.97329 -11.80384 -11.69276 -11.53070 -11.32779 -10.85391 -10.36987 -10.15661 -9.69878 -9.08062 -4.88311 0.21072 0.33257 1.39908 1.41117 1.46395 1.53662 1.63359 2.05622 2.13923 2.26662 2.50972 2.52064 2.57847 2.58925 2.77127 3.15686 3.30165 3.40547 3.49755 3.58854 3.65693 3.68898 3.79734 3.86965 3.91009 4.00768 4.02944 4.12401 4.13271 4.24004 4.25283 4.27870 4.37203 4.40714 4.49271 4.51329 4.57783 4.66217 4.72938 4.77213 4.99585 5.04161 5.22856 5.26977 5.29303 5.45428 6.02512 6.10750 6.28945 6.37851 6.63640 7.12367 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.247 4.247 5 C 0.193 3.807 6 O -0.272 6.272 7 C 0.037 3.963 8 C 0.515 3.485 9 O -0.505 6.505 10 N -0.728 5.728 11 C 0.133 3.867 12 C -0.112 4.112 13 H 0.100 0.900 14 C -0.154 4.154 15 C 0.061 3.939 16 O -0.507 6.507 17 C 0.433 3.567 18 F -0.175 7.175 19 F -0.183 7.183 20 F -0.174 7.174 21 C -0.109 4.109 22 C -0.181 4.181 23 C -0.060 4.060 24 O -0.521 6.521 25 Si 0.686 3.314 26 C -0.043 4.043 27 C -0.239 4.239 28 H 0.058 0.942 29 H 0.103 0.897 30 H 0.060 0.940 31 H 0.138 0.862 32 H 0.095 0.905 33 H 0.096 0.904 34 H 0.401 0.599 35 H 0.076 0.924 36 H 0.092 0.908 37 H 0.109 0.891 38 H 0.093 0.907 39 H 0.392 0.608 40 H 0.100 0.900 41 H 0.113 0.887 42 H 0.118 0.882 43 H 0.369 0.631 44 H -0.257 1.257 45 H -0.261 1.261 46 H 0.138 0.862 47 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.262 -6.061 2.226 8.329 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.267 4.267 5 C 0.146 3.854 6 O -0.183 6.183 7 C -0.041 4.041 8 C 0.299 3.701 9 O -0.378 6.378 10 N -0.383 5.383 11 C 0.010 3.990 12 C -0.131 4.131 13 H 0.119 0.881 14 C -0.192 4.192 15 C 0.017 3.983 16 O -0.314 6.314 17 C 0.378 3.622 18 F -0.157 7.157 19 F -0.164 7.164 20 F -0.156 7.156 21 C -0.146 4.146 22 C -0.183 4.183 23 C -0.169 4.169 24 O -0.326 6.326 25 Si 0.588 3.412 26 C -0.060 4.060 27 C -0.258 4.258 28 H 0.077 0.923 29 H 0.121 0.879 30 H 0.078 0.922 31 H 0.156 0.844 32 H 0.113 0.887 33 H 0.114 0.886 34 H 0.235 0.765 35 H 0.094 0.906 36 H 0.110 0.890 37 H 0.127 0.873 38 H 0.112 0.888 39 H 0.243 0.757 40 H 0.119 0.881 41 H 0.132 0.868 42 H 0.136 0.864 43 H 0.216 0.784 44 H -0.182 1.182 45 H -0.186 1.186 46 H 0.156 0.844 47 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -4.584 -4.314 2.910 6.935 hybrid contribution -0.032 -1.322 -2.050 2.440 sum -4.616 -5.636 0.860 7.336 Atomic orbital electron populations 1.23145 0.77600 1.04413 1.01782 1.86073 1.22018 1.26688 1.88003 1.18690 0.91461 0.84384 0.92648 1.20391 0.92920 0.97332 1.16043 1.18400 0.81991 0.92418 0.92585 1.86267 1.14711 1.29603 1.87700 1.22511 0.90337 0.87109 1.04191 1.19962 0.87279 0.85612 0.77239 1.90820 1.79689 1.20786 1.46542 1.45760 1.06569 1.09154 1.76818 1.21321 0.77845 0.95470 1.04385 1.22396 0.95519 0.97655 0.97534 0.88142 1.23844 0.95642 1.01017 0.98675 1.23688 0.91669 0.85475 0.97422 1.86652 1.94437 1.22772 1.27580 1.21294 0.85467 0.78528 0.76920 1.93184 1.96461 1.34691 1.91315 1.93189 1.96337 1.95792 1.31112 1.93233 1.48238 1.84949 1.89149 1.23115 0.96175 1.05490 0.89855 1.19511 0.92728 0.94387 1.11637 1.24820 1.05979 0.97772 0.88371 1.86702 1.36911 1.92779 1.16222 0.95210 0.77593 0.78173 0.90216 1.20786 0.92697 0.97887 0.94670 1.21120 1.00436 0.91772 1.12476 0.92313 0.87888 0.92151 0.84417 0.88724 0.88592 0.76456 0.90605 0.88996 0.87281 0.88829 0.75731 0.88127 0.86840 0.86436 0.78417 1.18195 1.18644 0.84440 0.84787 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 9.81 101.05 0.99 0.92 16 2 O -0.32 -0.22 10.49 -19.40 -0.20 -0.42 16 3 C 0.17 0.18 6.68 -39.24 -0.26 -0.08 16 4 C -0.25 -0.25 8.97 -39.29 -0.35 -0.60 16 5 C 0.19 0.43 6.66 -39.24 -0.26 0.17 16 6 O -0.27 -0.90 8.99 -39.32 -0.35 -1.25 16 7 C 0.04 -0.02 5.22 36.00 0.19 0.17 16 8 C 0.51 0.81 7.91 -10.99 -0.09 0.72 16 9 O -0.51 -3.51 16.50 -14.35 -0.24 -3.75 16 10 N -0.73 1.45 5.56 -60.29 -0.33 1.11 16 11 C 0.13 -0.16 5.27 -4.04 -0.02 -0.19 16 12 C -0.11 0.42 3.93 -89.80 -0.35 0.06 16 13 H 0.10 -0.53 8.14 -51.93 -0.42 -0.95 16 14 C -0.15 0.56 6.93 -25.82 -0.18 0.38 16 15 C 0.06 -0.12 1.36 -89.71 -0.12 -0.24 16 16 O -0.51 0.56 11.43 -35.23 -0.40 0.15 16 17 C 0.43 -0.08 2.85 37.15 0.11 0.03 16 18 F -0.18 0.00 15.77 2.25 0.04 0.04 16 19 F -0.18 -0.09 16.65 2.25 0.04 -0.05 16 20 F -0.17 -0.29 17.18 2.25 0.04 -0.25 16 21 C -0.11 0.30 6.86 -25.92 -0.18 0.12 16 22 C -0.18 -0.32 5.27 -104.45 -0.55 -0.87 16 23 C -0.06 -0.13 2.37 36.00 0.09 -0.05 16 24 O -0.52 -2.08 12.88 -35.23 -0.45 -2.53 16 25 Si 0.69 0.14 30.24 -169.99 -5.14 -5.00 16 26 C -0.04 -0.01 8.65 -39.62 -0.34 -0.35 16 27 C -0.24 0.00 9.04 -39.41 -0.36 -0.36 16 28 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 29 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 30 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 31 H 0.14 -0.14 6.30 -52.48 -0.33 -0.47 16 32 H 0.09 -0.26 7.65 -51.93 -0.40 -0.66 16 33 H 0.10 -0.31 7.67 -51.93 -0.40 -0.70 16 34 H 0.40 -2.13 8.47 -40.82 -0.35 -2.47 16 35 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 36 H 0.09 0.06 6.10 -51.93 -0.32 -0.25 16 37 H 0.11 -0.46 7.14 -51.93 -0.37 -0.83 16 38 H 0.09 -0.35 8.10 -51.93 -0.42 -0.77 16 39 H 0.39 -1.46 8.42 45.56 0.38 -1.08 16 40 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 41 H 0.11 -0.43 7.89 -51.93 -0.41 -0.84 16 42 H 0.12 0.36 7.82 -51.93 -0.41 -0.04 16 43 H 0.37 0.18 8.70 45.56 0.40 0.58 16 44 H -0.26 -0.95 7.11 56.52 0.40 -0.55 16 45 H -0.26 -0.30 6.68 56.52 0.38 0.08 16 46 H 0.14 -0.20 4.85 -52.49 -0.25 -0.45 16 47 H 0.13 -0.28 6.29 -52.49 -0.33 -0.61 16 LS Contribution 400.52 15.07 6.04 6.04 Total: 0.00 -11.60 400.52 -7.58 -19.18 By element: Atomic # 1 Polarization: -8.23 SS G_CDS: -4.91 Total: -13.14 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: -1.69 Total: -0.14 kcal Atomic # 7 Polarization: 1.45 SS G_CDS: -0.33 Total: 1.11 kcal Atomic # 8 Polarization: -6.14 SS G_CDS: -1.65 Total: -7.79 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.11 Total: -0.26 kcal Atomic # 14 Polarization: 0.14 SS G_CDS: -5.14 Total: -5.00 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -11.60 -7.58 -19.18 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_4974312.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -250.947 kcal (2) G-P(sol) polarization free energy of solvation -11.604 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -262.551 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.580 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.184 kcal (6) G-S(sol) free energy of system = (1) + (5) -270.131 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds