Wall clock time and date at job start Tue Mar 9 2021 13:48:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.37644 * 125.67307 * 2 1 4 4 C 1.46674 * 126.23013 * 0.02562 * 3 2 1 5 5 O 1.21700 * 119.99567 * 354.52274 * 4 3 2 6 6 N 1.34777 * 120.00210 * 174.52114 * 4 3 2 7 7 C 1.46501 * 119.99722 * 185.08652 * 6 4 3 8 8 C 1.53002 * 109.46556 * 180.02562 * 7 6 4 9 9 H 1.09001 * 112.85291 * 43.80572 * 8 7 6 10 10 C 1.53781 * 113.60982 * 174.99950 * 8 7 6 11 11 C 1.53790 * 87.08175 * 89.11454 * 10 8 7 12 12 O 1.42895 * 113.61331 * 270.88424 * 11 10 8 13 13 C 1.53003 * 113.61161 * 140.06282 * 11 10 8 14 14 F 1.39896 * 109.47056 * 60.00638 * 13 11 10 15 15 F 1.39900 * 109.46756 * 180.02562 * 13 11 10 16 16 F 1.39901 * 109.47066 * 299.99971 * 13 11 10 17 17 C 1.53780 * 87.07965 * 25.43016 * 11 10 8 18 18 C 1.37889 * 107.54571 * 180.02562 * 3 2 1 19 19 C 1.39876 * 107.09180 * 0.23861 * 18 3 2 20 20 Br 1.89104 * 126.07090 * 179.71891 * 19 18 3 21 21 C 1.35497 * 107.85583 * 359.60781 * 19 18 3 22 22 C 1.50696 * 125.57569 * 180.14763 * 21 19 18 23 23 O 1.42905 * 109.47297 * 210.29396 * 22 21 19 24 24 Si 1.86306 * 109.46882 * 330.28919 * 22 21 19 25 25 H 1.08998 * 109.47265 * 94.55070 * 1 2 3 26 26 H 1.08995 * 109.47119 * 214.55454 * 1 2 3 27 27 H 1.09004 * 109.47231 * 334.55289 * 1 2 3 28 28 H 0.97000 * 119.99811 * 5.08915 * 6 4 3 29 29 H 1.08996 * 109.46853 * 300.00014 * 7 6 4 30 30 H 1.08996 * 109.47276 * 60.00214 * 7 6 4 31 31 H 1.09000 * 113.61853 * 203.66068 * 10 8 7 32 32 H 1.08998 * 113.61956 * 334.57116 * 10 8 7 33 33 H 0.96698 * 113.99621 * 180.02562 * 12 11 10 34 34 H 1.08990 * 113.61847 * 220.01825 * 17 11 10 35 35 H 1.09001 * 113.61305 * 89.11091 * 17 11 10 36 36 H 1.08001 * 126.45294 * 179.97438 * 18 3 2 37 37 H 1.08995 * 109.47191 * 90.29038 * 22 21 19 38 38 H 0.96698 * 113.99823 * 179.97438 * 23 22 21 39 39 H 1.48498 * 109.99913 * 178.68169 * 24 22 21 40 40 H 1.48495 * 110.00054 * 299.99774 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1182 0.0000 4 6 1.8121 2.5123 0.0005 5 8 0.6258 2.7648 -0.0996 6 7 2.7072 3.5138 0.1119 7 6 2.2455 4.8996 0.2246 8 6 3.4535 5.8319 0.3368 9 1 4.2488 5.5805 -0.3649 10 6 3.0818 7.3241 0.3378 11 6 2.9593 7.2118 1.8667 12 8 1.6540 6.8356 2.3102 13 6 3.5153 8.4240 2.6168 14 9 2.8203 9.5734 2.2256 15 9 3.3610 8.2312 3.9938 16 9 4.8734 8.5753 2.3168 17 6 3.9439 6.0337 1.7803 18 6 3.5781 0.6891 -0.0006 19 6 3.5529 -0.7094 -0.0065 20 35 5.0610 -1.8502 -0.0174 21 6 2.2559 -1.1015 -0.0005 22 6 1.7714 -2.5284 -0.0007 23 8 0.5132 -2.6043 -0.6740 24 14 3.0118 -3.6053 -0.8797 25 1 -0.3634 -0.0815 -1.0244 26 1 -0.3633 -0.8463 0.5829 27 1 -0.3634 0.9280 0.4416 28 1 3.6570 3.3170 0.1174 29 1 1.6651 5.1622 -0.6598 30 1 1.6220 5.0038 1.1126 31 1 3.8920 7.9762 0.0115 32 1 2.1370 7.5392 -0.1612 33 1 1.5706 6.7637 3.2709 34 1 3.6950 5.2070 2.4456 35 1 4.9898 6.3329 1.8482 36 1 4.4583 1.3151 -0.0011 37 1 1.6550 -2.8727 1.0268 38 1 0.1409 -3.4959 -0.7126 39 1 2.5611 -5.0201 -0.8591 40 1 3.1796 -3.1462 -2.2819 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664666_5000100.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:10 Heat of formation + Delta-G solvation = -188.364227 kcal Electronic energy + Delta-G solvation = -31586.271576 eV Core-core repulsion = 26421.849167 eV Total energy + Delta-G solvation = -5164.422409 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 413.028 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -51.21805 -48.75993 -48.70639 -42.86072 -41.27952 -40.06992 -37.92887 -36.66046 -35.40152 -34.50165 -32.59863 -31.32968 -29.98772 -27.76292 -27.37325 -27.07227 -26.02193 -23.49896 -23.09524 -21.53725 -20.89538 -20.25559 -19.99819 -19.50507 -19.38241 -18.75006 -18.56548 -17.37046 -17.25247 -16.96782 -16.84157 -16.37076 -16.13664 -15.77476 -15.56616 -15.50656 -15.36307 -15.14675 -14.98171 -14.88146 -14.82252 -14.64078 -14.55216 -14.42586 -14.27803 -14.06828 -13.95845 -13.83515 -13.43266 -13.17786 -12.96884 -12.94305 -12.78238 -12.43555 -12.09828 -12.01314 -11.57558 -11.56560 -11.26899 -11.06541 -10.81815 -10.20811 -9.86814 -9.29274 -4.68545 0.15867 0.35632 0.90886 1.24629 1.42250 1.56178 1.57950 1.95205 2.15108 2.25668 2.50346 2.62461 2.72281 2.93798 2.95494 3.37820 3.43989 3.47333 3.55185 3.64625 3.77205 3.85832 4.15765 4.21082 4.31368 4.39855 4.40543 4.50395 4.57150 4.63706 4.64821 4.76071 4.81952 4.90105 4.92606 5.13964 5.25657 5.37001 5.62183 5.79175 6.30821 6.41065 6.43589 7.06376 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.080 3.920 2 N -0.391 5.391 3 C -0.061 4.061 4 C 0.589 3.411 5 O -0.580 6.580 6 N -0.698 5.698 7 C 0.136 3.864 8 C -0.101 4.101 9 H 0.126 0.874 10 C -0.112 4.112 11 C 0.058 3.942 12 O -0.522 6.522 13 C 0.429 3.571 14 F -0.189 7.189 15 F -0.189 7.189 16 F -0.176 7.176 17 C -0.144 4.144 18 C -0.087 4.087 19 C -0.195 4.195 20 Br 0.095 6.905 21 C 0.094 3.906 22 C -0.044 4.044 23 O -0.558 6.558 24 Si 0.620 3.380 25 H 0.073 0.927 26 H 0.102 0.898 27 H 0.092 0.908 28 H 0.419 0.581 29 H 0.062 0.938 30 H 0.077 0.923 31 H 0.126 0.874 32 H 0.090 0.910 33 H 0.400 0.600 34 H 0.098 0.902 35 H 0.122 0.878 36 H 0.193 0.807 37 H 0.112 0.888 38 H 0.402 0.598 39 H -0.253 1.253 40 H -0.297 1.297 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.409 -1.563 2.488 6.156 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.063 5.063 3 C -0.175 4.175 4 C 0.377 3.623 5 O -0.462 6.462 6 N -0.350 5.350 7 C 0.013 3.987 8 C -0.119 4.119 9 H 0.144 0.856 10 C -0.150 4.150 11 C 0.014 3.986 12 O -0.331 6.331 13 C 0.375 3.625 14 F -0.170 7.170 15 F -0.170 7.170 16 F -0.157 7.157 17 C -0.181 4.181 18 C -0.114 4.114 19 C -0.280 4.280 20 Br 0.178 6.822 21 C -0.029 4.029 22 C -0.154 4.154 23 O -0.368 6.368 24 Si 0.523 3.477 25 H 0.092 0.908 26 H 0.120 0.880 27 H 0.111 0.889 28 H 0.257 0.743 29 H 0.080 0.920 30 H 0.095 0.905 31 H 0.144 0.856 32 H 0.109 0.891 33 H 0.253 0.747 34 H 0.117 0.883 35 H 0.140 0.860 36 H 0.211 0.789 37 H 0.129 0.871 38 H 0.254 0.746 39 H -0.178 1.178 40 H -0.224 1.224 Dipole moment (debyes) X Y Z Total from point charges 4.830 -1.612 1.116 5.212 hybrid contribution -1.411 0.145 0.526 1.513 sum 3.418 -1.467 1.643 4.066 Atomic orbital electron populations 1.22286 0.74454 1.05121 1.04215 1.43922 1.07809 1.04067 1.50517 1.20204 0.90461 0.87727 1.19091 1.16962 0.85406 0.83810 0.76140 1.90817 1.17988 1.85147 1.52216 1.45434 1.10261 1.05720 1.73553 1.21276 0.96176 0.78531 1.02710 1.22286 0.97899 0.93620 0.98130 0.85634 1.23237 1.04966 0.97604 0.89204 1.23844 0.86906 0.90721 0.97085 1.86627 1.26633 1.89777 1.30016 1.21648 0.76397 0.86471 0.78014 1.93198 1.79232 1.53944 1.90656 1.93173 1.95317 1.95111 1.33401 1.93179 1.33467 1.96168 1.92890 1.23821 0.99865 0.96542 0.97865 1.21517 0.95572 0.92341 1.01958 1.20622 0.90285 0.95149 1.21964 1.96293 1.32333 1.56202 1.97343 1.20047 0.89440 0.88463 1.04942 1.24321 0.93504 0.94628 1.02936 1.86457 1.34362 1.36401 1.79580 0.92936 0.93646 0.77939 0.83225 0.90834 0.87961 0.88949 0.74292 0.91995 0.90479 0.85567 0.89091 0.74723 0.88317 0.86002 0.78944 0.87079 0.74601 1.17808 1.22378 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.35 9.27 127.77 1.18 1.53 16 2 N -0.39 -2.06 3.16 -519.61 -1.64 -3.70 16 3 C -0.06 -0.20 6.88 40.35 0.28 0.08 16 4 C 0.59 2.56 7.77 86.45 0.67 3.23 16 5 O -0.58 -7.07 14.65 -4.35 -0.06 -7.14 16 6 N -0.70 2.54 5.54 -467.08 -2.59 -0.04 16 7 C 0.14 -0.42 5.26 86.38 0.45 0.03 16 8 C -0.10 0.91 3.94 -10.27 -0.04 0.87 16 9 H 0.13 -1.67 8.14 -2.39 -0.02 -1.69 16 10 C -0.11 0.74 6.86 31.12 0.21 0.95 16 11 C 0.06 -0.28 1.36 -10.26 -0.01 -0.29 16 12 O -0.52 1.49 11.44 -148.98 -1.70 -0.22 16 13 C 0.43 -0.42 2.85 71.98 0.21 -0.22 16 14 F -0.19 -0.62 17.18 44.97 0.77 0.16 16 15 F -0.19 -0.08 16.65 44.97 0.75 0.67 16 16 F -0.18 0.19 15.76 44.97 0.71 0.90 16 17 C -0.14 1.33 6.91 31.12 0.21 1.54 16 18 C -0.09 0.15 10.34 22.58 0.23 0.39 16 19 C -0.19 -0.14 6.16 22.03 0.14 -0.01 16 20 Br 0.09 -0.26 28.22 -20.37 -0.57 -0.83 16 21 C 0.09 0.33 6.19 41.34 0.26 0.58 16 22 C -0.04 -0.02 2.89 71.23 0.21 0.19 16 23 O -0.56 -0.49 10.47 -148.98 -1.56 -2.05 16 24 Si 0.62 1.47 27.08 68.60 1.86 3.33 16 25 H 0.07 0.42 8.14 -2.39 -0.02 0.40 16 26 H 0.10 0.12 7.10 -2.39 -0.02 0.10 16 27 H 0.09 0.60 6.19 -2.38 -0.01 0.59 16 28 H 0.42 -4.35 7.37 -92.71 -0.68 -5.03 16 29 H 0.06 0.02 8.14 -2.39 -0.02 0.01 16 30 H 0.08 0.04 6.12 -2.39 -0.01 0.02 16 31 H 0.13 -1.15 7.88 -2.39 -0.02 -1.17 16 32 H 0.09 -0.41 8.10 -2.39 -0.02 -0.43 16 33 H 0.40 -3.21 8.42 -74.06 -0.62 -3.83 16 34 H 0.10 -0.95 8.10 -2.39 -0.02 -0.97 16 35 H 0.12 -1.36 7.14 -2.39 -0.02 -1.37 16 36 H 0.19 -1.91 7.45 -2.91 -0.02 -1.93 16 37 H 0.11 -0.47 7.96 -2.39 -0.02 -0.49 16 38 H 0.40 -2.77 8.74 -74.06 -0.65 -3.42 16 39 H -0.25 -1.25 7.11 99.48 0.71 -0.54 16 40 H -0.30 -3.33 7.11 99.48 0.71 -2.62 16 Total: 0.00 -21.63 356.05 -0.81 -22.44 By element: Atomic # 1 Polarization: -21.61 SS G_CDS: -0.76 Total: -22.38 kcal Atomic # 6 Polarization: 4.87 SS G_CDS: 4.00 Total: 8.87 kcal Atomic # 7 Polarization: 0.49 SS G_CDS: -4.23 Total: -3.75 kcal Atomic # 8 Polarization: -6.08 SS G_CDS: -3.33 Total: -9.40 kcal Atomic # 9 Polarization: -0.51 SS G_CDS: 2.23 Total: 1.72 kcal Atomic # 14 Polarization: 1.47 SS G_CDS: 1.86 Total: 3.33 kcal Atomic # 35 Polarization: -0.26 SS G_CDS: -0.57 Total: -0.83 kcal Total: -21.63 -0.81 -22.44 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_5000100.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -165.928 kcal (2) G-P(sol) polarization free energy of solvation -21.627 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -187.556 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.808 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.436 kcal (6) G-S(sol) free energy of system = (1) + (5) -188.364 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds