Wall clock time and date at job start Tue Mar 9 2021 13:48:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.33816 * 122.45162 * 2 1 4 4 C 1.50696 * 124.52072 * 359.97438 * 3 2 1 5 5 O 1.42903 * 109.47131 * 329.99150 * 4 3 2 6 6 Si 1.86305 * 109.47185 * 209.99691 * 4 3 2 7 7 S 1.70619 * 110.95639 * 180.24525 * 3 2 1 8 8 C 1.75832 * 91.56032 * 359.65809 * 7 3 2 9 9 C 1.46586 * 125.45774 * 180.02562 * 8 7 3 10 10 O 1.21692 * 120.00383 * 180.33745 * 9 8 7 11 11 N 1.34780 * 119.99484 * 0.34091 * 9 8 7 12 12 C 1.46506 * 119.99702 * 180.02562 * 11 9 8 13 13 C 1.52991 * 109.47093 * 180.02562 * 12 11 9 14 14 H 1.09003 * 112.85555 * 43.80279 * 13 12 11 15 15 C 1.53787 * 113.61592 * 174.99711 * 13 12 11 16 16 C 1.53781 * 87.07920 * 89.11422 * 15 13 12 17 17 O 1.42896 * 113.61706 * 270.80145 * 16 15 13 18 18 C 1.53007 * 113.61490 * 139.98162 * 16 15 13 19 19 F 1.39897 * 109.46846 * 60.00218 * 18 16 15 20 20 F 1.39902 * 109.47163 * 179.97438 * 18 16 15 21 21 F 1.39895 * 109.46978 * 300.00151 * 18 16 15 22 22 C 1.53783 * 113.61498 * 272.49589 * 13 12 11 23 23 C 1.36644 * 109.08520 * 0.34036 * 8 7 3 24 24 H 1.09000 * 109.46988 * 89.99746 * 1 2 3 25 25 H 1.08999 * 109.46890 * 209.99445 * 1 2 3 26 26 H 1.09000 * 109.47195 * 329.99413 * 1 2 3 27 27 H 1.08999 * 109.47358 * 89.99510 * 4 3 2 28 28 H 0.96700 * 114.00311 * 300.00591 * 5 4 3 29 29 H 1.48497 * 110.00233 * 179.97438 * 6 4 3 30 30 H 1.48492 * 109.99800 * 301.31995 * 6 4 3 31 31 H 0.97000 * 120.00729 * 359.97438 * 11 9 8 32 32 H 1.09003 * 109.47116 * 299.99912 * 12 11 9 33 33 H 1.09001 * 109.47276 * 59.99760 * 12 11 9 34 34 H 1.08994 * 113.61505 * 203.65863 * 15 13 12 35 35 H 1.08993 * 113.61260 * 334.48272 * 15 13 12 36 36 H 0.96705 * 114.00809 * 180.02562 * 17 16 15 37 37 H 1.08999 * 113.61441 * 25.42729 * 22 13 12 38 38 H 1.08999 * 113.61696 * 156.33487 * 22 13 12 39 39 H 1.08004 * 123.35145 * 179.71148 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6356 2.5161 -0.0006 5 8 0.3757 2.4979 -0.6749 6 14 2.7929 3.6825 -0.8786 7 16 3.8970 0.7892 -0.0068 8 6 3.5937 -0.9428 0.0008 9 6 4.6231 -1.9863 0.0001 10 8 4.3002 -3.1596 -0.0005 11 7 5.9273 -1.6463 0.0001 12 6 6.9562 -2.6893 -0.0012 13 6 8.3412 -2.0393 -0.0002 14 1 8.4164 -1.2041 0.6961 15 6 9.4952 -3.0485 0.1215 16 6 9.4777 -3.1342 -1.4139 17 8 8.5929 -4.1349 -1.9214 18 6 10.8723 -3.2014 -2.0399 19 9 11.5419 -4.3346 -1.5662 20 9 10.7554 -3.2773 -3.4320 21 9 11.5944 -2.0543 -1.6939 22 6 8.8729 -1.7203 -1.4075 23 6 2.2446 -1.1601 0.0004 24 1 -0.3633 0.0000 -1.0277 25 1 -0.3633 -0.8900 0.5137 26 1 -0.3633 0.8899 0.5139 27 1 1.4929 2.8507 1.0270 28 1 0.4269 2.2092 -1.5963 29 1 2.2228 5.0536 -0.8865 30 1 4.1168 3.6863 -0.2059 31 1 6.1848 -0.7111 0.0002 32 1 6.8457 -3.3097 0.8883 33 1 6.8453 -3.3080 -0.8917 34 1 10.4116 -2.6174 0.5242 35 1 9.2121 -3.9781 0.6152 36 1 8.5778 -4.1939 -2.8865 37 1 8.0871 -1.5782 -2.1493 38 1 9.6192 -0.9260 -1.4226 39 1 1.8019 -2.1452 -0.0001 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_6739946.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:31 Heat of formation + Delta-G solvation = -205.711198 kcal Electronic energy + Delta-G solvation = -28919.121149 eV Core-core repulsion = 24120.116539 eV Total energy + Delta-G solvation = -4799.004610 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.079 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -51.24356 -48.79713 -48.69275 -41.54361 -40.60316 -39.74835 -37.41511 -36.70495 -35.22634 -32.29488 -30.30769 -30.13093 -27.66852 -27.35701 -25.85018 -24.36109 -23.46185 -21.79286 -20.88553 -20.17850 -20.13248 -19.54794 -19.46411 -19.18936 -17.86444 -17.39092 -17.28893 -16.84996 -16.59726 -16.35923 -16.28034 -15.83478 -15.61644 -15.48925 -15.35859 -15.15803 -14.97320 -14.87605 -14.80545 -14.65667 -14.58235 -14.44170 -14.12728 -13.99936 -13.66618 -13.49102 -13.19999 -13.12021 -12.96635 -12.63713 -12.49368 -12.33101 -12.28396 -11.81054 -11.79807 -11.35037 -11.05849 -10.76504 -10.19504 -9.70427 -9.47512 -5.23482 -0.64537 0.24970 0.66882 1.03962 1.30807 1.41227 1.46080 1.78466 1.93928 2.18128 2.28673 2.51688 2.56725 2.76912 3.15688 3.19737 3.30556 3.40255 3.51104 3.57360 3.79171 4.07751 4.12628 4.22082 4.24155 4.28191 4.39221 4.49484 4.55661 4.57505 4.64641 4.72333 4.77999 4.84569 4.98839 5.02034 5.27464 5.36634 5.43420 6.01974 6.32076 6.33838 7.08974 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C -0.090 4.090 3 C -0.237 4.237 4 C -0.027 4.027 5 O -0.529 6.529 6 Si 0.659 3.341 7 S 0.191 5.809 8 C -0.262 4.262 9 C 0.592 3.408 10 O -0.522 6.522 11 N -0.727 5.727 12 C 0.132 3.868 13 C -0.114 4.114 14 H 0.100 0.900 15 C -0.108 4.108 16 C 0.062 3.938 17 O -0.507 6.507 18 C 0.433 3.567 19 F -0.174 7.174 20 F -0.183 7.183 21 F -0.175 7.175 22 C -0.155 4.155 23 C -0.046 4.046 24 H 0.073 0.927 25 H 0.062 0.938 26 H 0.084 0.916 27 H 0.124 0.876 28 H 0.381 0.619 29 H -0.234 1.234 30 H -0.237 1.237 31 H 0.397 0.603 32 H 0.077 0.923 33 H 0.093 0.907 34 H 0.113 0.887 35 H 0.100 0.900 36 H 0.392 0.608 37 H 0.094 0.906 38 H 0.109 0.891 39 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.470 4.165 -1.702 4.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.103 4.103 3 C -0.356 4.356 4 C -0.140 4.140 5 O -0.335 6.335 6 Si 0.558 3.442 7 S 0.459 5.541 8 C -0.381 4.381 9 C 0.378 3.622 10 O -0.400 6.400 11 N -0.379 5.379 12 C 0.009 3.991 13 C -0.133 4.133 14 H 0.118 0.882 15 C -0.146 4.146 16 C 0.018 3.982 17 O -0.314 6.314 18 C 0.378 3.622 19 F -0.156 7.156 20 F -0.164 7.164 21 F -0.156 7.156 22 C -0.192 4.192 23 C -0.079 4.079 24 H 0.091 0.909 25 H 0.081 0.919 26 H 0.103 0.897 27 H 0.141 0.859 28 H 0.229 0.771 29 H -0.157 1.157 30 H -0.161 1.161 31 H 0.232 0.768 32 H 0.095 0.905 33 H 0.111 0.889 34 H 0.131 0.869 35 H 0.119 0.881 36 H 0.243 0.757 37 H 0.112 0.888 38 H 0.128 0.872 39 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 1.805 5.039 -0.466 5.373 hybrid contribution -0.831 -0.701 -0.268 1.120 sum 0.973 4.338 -0.734 4.506 Atomic orbital electron populations 1.20647 0.88503 1.03395 1.02894 1.18727 0.98478 0.90473 1.02606 1.24461 0.98339 1.00947 1.11831 1.24467 0.92249 0.95302 1.02012 1.86534 1.27694 1.90030 1.29251 0.94812 0.78195 0.80790 0.90401 1.82993 1.03417 0.98377 1.69292 1.24571 0.98008 0.96967 1.18604 1.16905 0.81491 0.87425 0.76392 1.90874 1.81553 1.18149 1.49394 1.45824 1.05493 1.10276 1.76342 1.21339 0.83654 0.89627 1.04440 1.22409 0.93939 0.99414 0.97533 0.88203 1.23117 0.99891 1.01524 0.90057 1.23641 0.84374 0.92409 0.97756 1.86648 1.61486 1.55392 1.27893 1.21294 0.90131 0.74023 0.76756 1.93231 1.82732 1.51627 1.87985 1.93190 1.96172 1.95992 1.31057 1.93185 1.80151 1.50465 1.91840 1.23822 1.01928 0.94740 0.98726 1.20753 0.90922 1.00188 0.96068 0.90880 0.91900 0.89686 0.85887 0.77093 1.15728 1.16134 0.76834 0.90510 0.88858 0.86853 0.88114 0.75740 0.88768 0.87225 0.82688 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.10 8.67 36.01 0.31 0.41 16 2 C -0.09 0.00 5.75 -106.45 -0.61 -0.61 16 3 C -0.24 0.19 5.54 -35.86 -0.20 -0.01 16 4 C -0.03 0.05 2.76 36.00 0.10 0.15 16 5 O -0.53 0.93 9.85 -35.23 -0.35 0.58 16 6 Si 0.66 -1.58 31.31 -169.99 -5.32 -6.90 16 7 S 0.19 -0.24 19.77 -107.50 -2.13 -2.36 16 8 C -0.26 -0.29 6.45 -36.79 -0.24 -0.53 16 9 C 0.59 1.48 7.78 -12.89 -0.10 1.38 16 10 O -0.52 -3.31 16.84 5.20 0.09 -3.22 16 11 N -0.73 0.44 5.55 -61.65 -0.34 0.10 16 12 C 0.13 -0.11 5.26 -4.04 -0.02 -0.14 16 13 C -0.11 0.38 3.94 -89.81 -0.35 0.02 16 14 H 0.10 -0.46 8.14 -51.93 -0.42 -0.88 16 15 C -0.11 0.30 6.86 -25.92 -0.18 0.12 16 16 C 0.06 -0.12 1.36 -89.80 -0.12 -0.25 16 17 O -0.51 0.73 11.45 -35.23 -0.40 0.32 16 18 C 0.43 -0.15 2.85 37.16 0.11 -0.04 16 19 F -0.17 -0.25 17.18 2.25 0.04 -0.22 16 20 F -0.18 -0.04 16.65 2.25 0.04 0.00 16 21 F -0.17 0.02 15.75 2.25 0.04 0.05 16 22 C -0.15 0.54 6.91 -25.92 -0.18 0.36 16 23 C -0.05 -0.05 9.80 -40.44 -0.40 -0.45 16 24 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 25 H 0.06 -0.06 8.13 -51.93 -0.42 -0.49 16 26 H 0.08 -0.03 6.42 -51.93 -0.33 -0.36 16 27 H 0.12 -0.17 7.96 -51.93 -0.41 -0.59 16 28 H 0.38 -1.93 8.66 45.56 0.39 -1.54 16 29 H -0.23 -0.12 7.11 56.52 0.40 0.28 16 30 H -0.24 0.20 7.09 56.52 0.40 0.60 16 31 H 0.40 -1.14 7.59 -40.82 -0.31 -1.45 16 32 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 33 H 0.09 0.05 6.13 -51.93 -0.32 -0.27 16 34 H 0.11 -0.43 7.88 -51.93 -0.41 -0.83 16 35 H 0.10 -0.22 8.10 -51.93 -0.42 -0.65 16 36 H 0.39 -1.62 8.42 45.56 0.38 -1.24 16 37 H 0.09 -0.34 8.10 -51.93 -0.42 -0.77 16 38 H 0.11 -0.45 7.13 -51.93 -0.37 -0.82 16 39 H 0.16 0.19 8.06 -52.48 -0.42 -0.23 16 LS Contribution 349.49 15.07 5.27 5.27 Total: 0.00 -7.70 349.49 -8.48 -16.19 By element: Atomic # 1 Polarization: -6.69 SS G_CDS: -3.53 Total: -10.21 kcal Atomic # 6 Polarization: 2.29 SS G_CDS: -1.88 Total: 0.41 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.34 Total: 0.10 kcal Atomic # 8 Polarization: -1.66 SS G_CDS: -0.66 Total: -2.32 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.11 Total: -0.17 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.32 Total: -6.90 kcal Atomic # 16 Polarization: -0.24 SS G_CDS: -2.13 Total: -2.36 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -7.70 -8.48 -16.19 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_6739946.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -189.524 kcal (2) G-P(sol) polarization free energy of solvation -7.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -197.227 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.484 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.187 kcal (6) G-S(sol) free energy of system = (1) + (5) -205.711 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds