Wall clock time and date at job start Tue Mar 9 2021 13:48:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.46949 * 2 1 4 4 C 1.50699 * 109.47365 * 239.99564 * 2 1 3 5 5 C 1.32771 * 124.71483 * 300.32817 * 4 2 1 6 6 C 1.44425 * 113.08507 * 180.17880 * 5 4 2 7 7 C 1.47186 * 123.46376 * 179.80802 * 6 5 4 8 8 O 1.21635 * 119.99825 * 359.72157 * 7 6 5 9 9 N 1.34773 * 120.00145 * 179.72861 * 7 6 5 10 10 C 1.46503 * 120.00036 * 179.97438 * 9 7 6 11 11 C 1.52992 * 109.47166 * 180.02562 * 10 9 7 12 12 H 1.09004 * 112.90752 * 316.24725 * 11 10 9 13 13 C 1.53784 * 113.61673 * 87.50094 * 11 10 9 14 14 C 1.53779 * 87.08045 * 89.11647 * 13 11 10 15 15 O 1.42904 * 113.68991 * 270.87330 * 14 13 11 16 16 C 1.52998 * 113.61561 * 139.98260 * 14 13 11 17 17 F 1.39899 * 109.47127 * 322.50436 * 16 14 13 18 18 F 1.39900 * 109.47241 * 82.50163 * 16 14 13 19 19 F 1.39902 * 109.47296 * 202.50448 * 16 14 13 20 20 C 1.53779 * 87.08402 * 25.43458 * 14 13 11 21 21 C 1.36008 * 113.07611 * 359.53535 * 6 5 4 22 22 S 1.70453 * 110.81990 * 0.24791 * 21 6 5 23 23 H 0.96701 * 113.99906 * 60.00453 * 1 2 3 24 24 H 1.08999 * 109.46863 * 119.99957 * 2 1 3 25 25 H 1.48497 * 110.00439 * 59.99771 * 3 2 1 26 26 H 1.48501 * 110.00048 * 181.31975 * 3 2 1 27 27 H 1.07998 * 123.45523 * 359.97438 * 5 4 2 28 28 H 0.97004 * 119.99934 * 359.97438 * 9 7 6 29 29 H 1.08996 * 109.47072 * 59.99516 * 10 9 7 30 30 H 1.09007 * 109.46579 * 299.99681 * 10 9 7 31 31 H 1.09002 * 113.61478 * 203.66611 * 13 11 10 32 32 H 1.09004 * 113.61162 * 334.56789 * 13 11 10 33 33 H 0.96703 * 113.99856 * 277.53589 * 15 14 13 34 34 H 1.08997 * 113.61646 * 220.02209 * 20 14 13 35 35 H 1.09000 * 113.61527 * 89.11480 * 20 14 13 36 36 H 1.07998 * 124.59372 * 180.28180 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.6639 -1.9746 -1.5357 6 6 2.2775 -2.4006 -2.7718 7 6 2.1343 -3.7577 -3.3234 8 8 1.4752 -4.5894 -2.7290 9 7 2.7337 -4.0788 -4.4871 10 6 2.5917 -5.4298 -5.0358 11 6 3.3642 -5.5291 -6.3526 12 1 3.2159 -4.6633 -6.9979 13 6 4.8413 -5.9174 -6.1726 14 6 4.3860 -7.3832 -6.2674 15 8 4.0305 -7.9566 -5.0077 16 6 5.3356 -8.2689 -7.0765 17 9 5.8368 -7.5443 -8.1632 18 9 6.3959 -8.6814 -6.2624 19 9 4.6425 -9.3907 -7.5438 20 6 3.1802 -6.8743 -7.0748 21 6 2.9963 -1.4172 -3.3768 22 16 2.9451 0.0205 -2.4626 23 1 -0.3933 0.4416 -0.7651 24 1 1.7923 -0.5138 0.8900 25 1 1.5614 2.4680 1.2084 26 1 3.5345 1.7703 -0.0321 27 1 1.0531 -2.6192 -0.9211 28 1 3.2591 -3.4155 -4.9613 29 1 1.5374 -5.6398 -5.2158 30 1 2.9904 -6.1541 -4.3255 31 1 5.4790 -5.6040 -6.9991 32 1 5.2476 -5.6486 -5.1975 33 1 4.7847 -8.2786 -4.4952 34 1 2.2456 -7.3780 -6.8282 35 1 3.3638 -6.8225 -8.1480 36 1 3.5271 -1.5315 -4.3104 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_6894386.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:33 Heat of formation + Delta-G solvation = -202.477178 kcal Electronic energy + Delta-G solvation = -26799.156639 eV Core-core repulsion = 22155.829885 eV Total energy + Delta-G solvation = -4643.326753 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.063 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -51.24903 -48.80234 -48.69809 -41.56397 -40.59009 -38.80702 -37.13263 -36.69201 -35.22464 -32.01857 -30.02425 -27.47338 -27.34684 -26.98374 -25.10913 -23.50521 -22.01842 -21.03254 -20.35928 -20.04068 -19.52812 -19.43904 -18.99217 -18.05275 -17.70272 -17.38129 -16.76426 -16.50205 -16.30523 -16.19015 -15.69249 -15.59140 -15.47973 -15.30791 -15.16380 -14.97608 -14.88397 -14.79957 -14.61696 -14.46202 -14.14531 -14.11271 -13.75791 -13.61531 -13.53413 -13.09348 -12.71982 -12.62649 -12.32662 -12.27671 -11.94024 -11.80215 -11.33516 -10.90066 -10.65215 -10.15301 -10.01942 -9.53255 -5.23368 -0.39848 0.29687 0.64814 0.89476 1.15405 1.45646 1.51901 1.83728 2.01085 2.28306 2.36875 2.51319 2.56389 2.76553 3.15530 3.28320 3.32571 3.40013 3.52724 3.61741 3.80865 3.96525 4.12360 4.23322 4.24818 4.28550 4.37545 4.48798 4.57826 4.65939 4.68580 4.73872 4.97973 5.04050 5.19135 5.35213 6.01698 6.41209 6.44255 7.20021 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.026 4.026 3 Si 0.654 3.346 4 C -0.244 4.244 5 C -0.053 4.053 6 C -0.154 4.154 7 C 0.577 3.423 8 O -0.529 6.529 9 N -0.726 5.726 10 C 0.132 3.868 11 C -0.113 4.113 12 H 0.099 0.901 13 C -0.155 4.155 14 C 0.062 3.938 15 O -0.507 6.507 16 C 0.432 3.568 17 F -0.175 7.175 18 F -0.183 7.183 19 F -0.174 7.174 20 C -0.109 4.109 21 C -0.207 4.207 22 S 0.196 5.804 23 H 0.381 0.619 24 H 0.124 0.876 25 H -0.232 1.232 26 H -0.236 1.236 27 H 0.157 0.843 28 H 0.398 0.602 29 H 0.076 0.924 30 H 0.091 0.909 31 H 0.109 0.891 32 H 0.093 0.907 33 H 0.392 0.608 34 H 0.100 0.900 35 H 0.113 0.887 36 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.053 5.644 -4.021 7.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.139 4.139 3 Si 0.553 3.447 4 C -0.360 4.360 5 C -0.082 4.082 6 C -0.173 4.173 7 C 0.362 3.638 8 O -0.406 6.406 9 N -0.379 5.379 10 C 0.009 3.991 11 C -0.131 4.131 12 H 0.118 0.882 13 C -0.192 4.192 14 C 0.018 3.982 15 O -0.314 6.314 16 C 0.378 3.622 17 F -0.157 7.157 18 F -0.164 7.164 19 F -0.156 7.156 20 C -0.146 4.146 21 C -0.345 4.345 22 S 0.462 5.538 23 H 0.229 0.771 24 H 0.141 0.859 25 H -0.155 1.155 26 H -0.161 1.161 27 H 0.174 0.826 28 H 0.233 0.767 29 H 0.094 0.906 30 H 0.109 0.891 31 H 0.127 0.873 32 H 0.111 0.889 33 H 0.242 0.758 34 H 0.119 0.881 35 H 0.131 0.869 36 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges 2.205 6.878 -3.000 7.821 hybrid contribution 0.675 -2.243 -0.110 2.345 sum 2.879 4.635 -3.110 6.280 Atomic orbital electron populations 1.86545 1.16521 1.81668 1.49134 1.24448 0.85296 1.09062 0.95115 0.95103 0.82041 0.77518 0.90014 1.24806 1.08535 0.99237 1.03434 1.21054 0.98103 0.94364 0.94706 1.20259 1.04269 0.94733 0.98012 1.17582 0.79156 0.86606 0.80412 1.90843 1.39915 1.50343 1.59489 1.45795 1.53863 1.14344 1.23858 1.21311 1.00631 0.83606 0.93567 1.22401 0.94860 0.98750 0.97115 0.88236 1.23819 0.97865 0.92349 1.05198 1.23642 0.96550 0.91200 0.86812 1.86654 1.37022 1.80196 1.27541 1.21301 0.80971 0.80429 0.79518 1.93185 1.88404 1.77347 1.56720 1.93189 1.59471 1.91264 1.72509 1.93232 1.78798 1.54205 1.89325 1.23124 0.97377 0.94833 0.99298 1.25779 1.04576 0.98945 1.05216 1.83096 1.46896 1.11423 1.12402 0.77135 0.85874 1.15526 1.16055 0.82569 0.76741 0.90615 0.89066 0.87292 0.88863 0.75758 0.88118 0.86866 0.81181 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.05 12.85 -35.23 -0.45 -0.40 16 2 C -0.03 0.02 2.95 36.01 0.11 0.13 16 3 Si 0.65 -1.20 30.91 -169.99 -5.25 -6.45 16 4 C -0.24 0.10 5.69 -36.18 -0.21 -0.11 16 5 C -0.05 -0.08 9.91 -39.02 -0.39 -0.46 16 6 C -0.15 -0.12 5.98 -104.63 -0.63 -0.74 16 7 C 0.58 1.36 7.79 -12.63 -0.10 1.26 16 8 O -0.53 -3.53 16.80 5.25 0.09 -3.44 16 9 N -0.73 0.82 5.52 -61.46 -0.34 0.48 16 10 C 0.13 -0.12 5.26 -4.04 -0.02 -0.15 16 11 C -0.11 0.39 3.94 -89.81 -0.35 0.04 16 12 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 13 C -0.15 0.54 6.91 -25.92 -0.18 0.36 16 14 C 0.06 -0.12 1.36 -89.81 -0.12 -0.24 16 15 O -0.51 0.59 11.45 -35.23 -0.40 0.19 16 16 C 0.43 -0.10 2.85 37.16 0.11 0.01 16 17 F -0.18 0.01 15.75 2.25 0.04 0.04 16 18 F -0.18 -0.08 16.65 2.25 0.04 -0.04 16 19 F -0.17 -0.27 17.18 2.25 0.04 -0.23 16 20 C -0.11 0.30 6.86 -25.92 -0.18 0.12 16 21 C -0.21 0.42 10.38 29.93 0.31 0.73 16 22 S 0.20 -0.43 20.18 -107.50 -2.17 -2.60 16 23 H 0.38 -1.53 8.70 45.56 0.40 -1.14 16 24 H 0.12 -0.05 7.96 -51.93 -0.41 -0.47 16 25 H -0.23 -0.25 7.11 56.52 0.40 0.15 16 26 H -0.24 0.01 7.11 56.52 0.40 0.41 16 27 H 0.16 0.40 8.06 -52.49 -0.42 -0.02 16 28 H 0.40 -1.63 6.97 -40.82 -0.28 -1.91 16 29 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.09 0.07 6.12 -51.93 -0.32 -0.25 16 31 H 0.11 -0.45 7.13 -51.93 -0.37 -0.82 16 32 H 0.09 -0.33 8.10 -51.93 -0.42 -0.75 16 33 H 0.39 -1.50 8.42 45.56 0.38 -1.12 16 34 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 35 H 0.11 -0.43 7.88 -51.93 -0.41 -0.84 16 36 H 0.17 -0.87 7.01 -52.49 -0.37 -1.24 16 LS Contribution 332.11 15.07 5.00 5.00 Total: 0.00 -8.70 332.11 -7.75 -16.45 By element: Atomic # 1 Polarization: -7.27 SS G_CDS: -2.69 Total: -9.96 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: -1.65 Total: 0.96 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: -0.34 Total: 0.48 kcal Atomic # 8 Polarization: -2.88 SS G_CDS: -0.77 Total: -3.65 kcal Atomic # 9 Polarization: -0.34 SS G_CDS: 0.11 Total: -0.23 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.25 Total: -6.45 kcal Atomic # 16 Polarization: -0.43 SS G_CDS: -2.17 Total: -2.60 kcal Total LS contribution 5.00 Total: 5.00 kcal Total: -8.70 -7.75 -16.45 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_6894386.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -186.024 kcal (2) G-P(sol) polarization free energy of solvation -8.701 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -194.725 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.752 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.453 kcal (6) G-S(sol) free energy of system = (1) + (5) -202.477 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds