Wall clock time and date at job start Tue Mar 9 2021 13:48:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.46949 * 2 1 4 4 C 1.50699 * 109.47365 * 239.99564 * 2 1 3 5 5 C 1.32771 * 124.71483 * 300.32817 * 4 2 1 6 6 C 1.44425 * 113.08507 * 180.17880 * 5 4 2 7 7 C 1.47186 * 123.46376 * 179.80802 * 6 5 4 8 8 O 1.21635 * 119.99825 * 359.72157 * 7 6 5 9 9 N 1.34773 * 120.00145 * 179.72861 * 7 6 5 10 10 C 1.46503 * 120.00036 * 179.97438 * 9 7 6 11 11 C 1.52992 * 109.47166 * 180.02562 * 10 9 7 12 12 H 1.09004 * 112.90752 * 316.24725 * 11 10 9 13 13 C 1.53784 * 113.61673 * 87.50094 * 11 10 9 14 14 C 1.53779 * 87.08045 * 89.11647 * 13 11 10 15 15 O 1.42904 * 113.68991 * 270.87330 * 14 13 11 16 16 C 1.52998 * 113.61561 * 139.98260 * 14 13 11 17 17 F 1.39899 * 109.47127 * 322.50436 * 16 14 13 18 18 F 1.39900 * 109.47241 * 82.50163 * 16 14 13 19 19 F 1.39902 * 109.47296 * 202.50448 * 16 14 13 20 20 C 1.53779 * 87.08402 * 25.43458 * 14 13 11 21 21 C 1.36008 * 113.07611 * 359.53535 * 6 5 4 22 22 S 1.70453 * 110.81990 * 0.24791 * 21 6 5 23 23 H 0.96701 * 113.99906 * 60.00453 * 1 2 3 24 24 H 1.08999 * 109.46863 * 119.99957 * 2 1 3 25 25 H 1.48497 * 110.00439 * 59.99771 * 3 2 1 26 26 H 1.48501 * 110.00048 * 181.31975 * 3 2 1 27 27 H 1.07998 * 123.45523 * 359.97438 * 5 4 2 28 28 H 0.97004 * 119.99934 * 359.97438 * 9 7 6 29 29 H 1.08996 * 109.47072 * 59.99516 * 10 9 7 30 30 H 1.09007 * 109.46579 * 299.99681 * 10 9 7 31 31 H 1.09002 * 113.61478 * 203.66611 * 13 11 10 32 32 H 1.09004 * 113.61162 * 334.56789 * 13 11 10 33 33 H 0.96703 * 113.99856 * 277.53589 * 15 14 13 34 34 H 1.08997 * 113.61646 * 220.02209 * 20 14 13 35 35 H 1.09000 * 113.61527 * 89.11480 * 20 14 13 36 36 H 1.07998 * 124.59372 * 180.28180 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.6639 -1.9746 -1.5357 6 6 2.2775 -2.4006 -2.7718 7 6 2.1343 -3.7577 -3.3234 8 8 1.4752 -4.5894 -2.7290 9 7 2.7337 -4.0788 -4.4871 10 6 2.5917 -5.4298 -5.0358 11 6 3.3642 -5.5291 -6.3526 12 1 3.2159 -4.6633 -6.9979 13 6 4.8413 -5.9174 -6.1726 14 6 4.3860 -7.3832 -6.2674 15 8 4.0305 -7.9566 -5.0077 16 6 5.3356 -8.2689 -7.0765 17 9 5.8368 -7.5443 -8.1632 18 9 6.3959 -8.6814 -6.2624 19 9 4.6425 -9.3907 -7.5438 20 6 3.1802 -6.8743 -7.0748 21 6 2.9963 -1.4172 -3.3768 22 16 2.9451 0.0205 -2.4626 23 1 -0.3933 0.4416 -0.7651 24 1 1.7923 -0.5138 0.8900 25 1 1.5614 2.4680 1.2084 26 1 3.5345 1.7703 -0.0321 27 1 1.0531 -2.6192 -0.9211 28 1 3.2591 -3.4155 -4.9613 29 1 1.5374 -5.6398 -5.2158 30 1 2.9904 -6.1541 -4.3255 31 1 5.4790 -5.6040 -6.9991 32 1 5.2476 -5.6486 -5.1975 33 1 4.7847 -8.2786 -4.4952 34 1 2.2456 -7.3780 -6.8282 35 1 3.3638 -6.8225 -8.1480 36 1 3.5271 -1.5315 -4.3104 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664666_6894386.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:33 Heat of formation + Delta-G solvation = -205.252818 kcal Electronic energy + Delta-G solvation = -26799.277000 eV Core-core repulsion = 22155.829885 eV Total energy + Delta-G solvation = -4643.447114 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.063 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -51.24748 -48.79080 -48.73176 -41.46411 -40.59386 -38.79899 -37.10913 -36.64018 -35.23650 -31.97460 -29.94583 -27.43065 -27.10409 -26.93373 -25.07561 -23.39745 -22.04766 -20.94776 -20.28698 -19.96811 -19.52891 -19.40064 -18.89473 -18.05621 -17.66121 -17.20947 -16.73817 -16.53591 -16.23504 -16.13896 -15.70561 -15.60348 -15.46873 -15.23302 -15.17541 -14.96176 -14.90575 -14.77855 -14.53420 -14.42588 -14.11069 -14.05975 -13.67942 -13.55154 -13.42793 -12.97438 -12.65356 -12.45961 -12.28799 -12.12556 -11.92024 -11.59915 -11.21028 -11.00528 -10.60239 -10.21606 -9.96037 -9.42067 -5.11690 -0.32161 0.40405 0.70824 0.83580 1.23978 1.53024 1.60976 1.91760 2.05631 2.27503 2.47347 2.59338 2.69070 2.92113 3.34904 3.39782 3.45550 3.54014 3.66743 3.76781 3.95640 4.02055 4.29250 4.36979 4.42117 4.47574 4.53223 4.72698 4.73574 4.77529 4.86747 4.89163 5.01144 5.12480 5.18663 5.37462 6.27380 6.47192 6.69345 7.16011 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.039 4.039 3 Si 0.742 3.258 4 C -0.250 4.250 5 C -0.077 4.077 6 C -0.183 4.183 7 C 0.573 3.427 8 O -0.587 6.587 9 N -0.706 5.706 10 C 0.132 3.868 11 C -0.100 4.100 12 H 0.127 0.873 13 C -0.144 4.144 14 C 0.057 3.943 15 O -0.522 6.522 16 C 0.430 3.570 17 F -0.175 7.175 18 F -0.189 7.189 19 F -0.188 7.188 20 C -0.112 4.112 21 C -0.187 4.187 22 S 0.252 5.748 23 H 0.397 0.603 24 H 0.112 0.888 25 H -0.275 1.275 26 H -0.253 1.253 27 H 0.129 0.871 28 H 0.416 0.584 29 H 0.060 0.940 30 H 0.072 0.928 31 H 0.123 0.877 32 H 0.095 0.905 33 H 0.400 0.600 34 H 0.090 0.910 35 H 0.128 0.872 36 H 0.208 0.792 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.421 7.694 -5.828 10.241 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.151 4.151 3 Si 0.643 3.357 4 C -0.366 4.366 5 C -0.107 4.107 6 C -0.201 4.201 7 C 0.360 3.640 8 O -0.469 6.469 9 N -0.359 5.359 10 C 0.009 3.991 11 C -0.118 4.118 12 H 0.145 0.855 13 C -0.182 4.182 14 C 0.013 3.987 15 O -0.331 6.331 16 C 0.375 3.625 17 F -0.156 7.156 18 F -0.170 7.170 19 F -0.170 7.170 20 C -0.150 4.150 21 C -0.326 4.326 22 S 0.519 5.481 23 H 0.247 0.753 24 H 0.130 0.870 25 H -0.201 1.201 26 H -0.178 1.178 27 H 0.147 0.853 28 H 0.254 0.746 29 H 0.078 0.922 30 H 0.090 0.910 31 H 0.141 0.859 32 H 0.114 0.886 33 H 0.252 0.748 34 H 0.109 0.891 35 H 0.146 0.854 36 H 0.225 0.775 Dipole moment (debyes) X Y Z Total from point charges 3.593 8.929 -4.859 10.782 hybrid contribution 0.268 -2.867 0.478 2.919 sum 3.861 6.062 -4.381 8.417 Atomic orbital electron populations 1.86503 1.17038 1.82233 1.50365 1.24720 0.85173 1.10414 0.94801 0.94148 0.79453 0.74259 0.87830 1.24897 1.08730 0.98873 1.04128 1.20970 0.99148 0.95022 0.95530 1.20076 1.06645 0.94762 0.98636 1.17924 0.78517 0.86820 0.80771 1.90807 1.42716 1.52056 1.61290 1.45631 1.52823 1.14672 1.22745 1.21244 1.00087 0.83221 0.94537 1.22281 0.94382 0.99390 0.95745 0.85535 1.23826 0.97861 0.90568 1.05911 1.23850 0.96797 0.91618 0.86387 1.86642 1.37998 1.80478 1.28011 1.21624 0.81028 0.80231 0.79585 1.93177 1.88445 1.77202 1.56812 1.93173 1.59832 1.91378 1.72640 1.93201 1.79092 1.55133 1.89545 1.23242 0.96579 0.95048 1.00118 1.26191 1.02500 0.98070 1.05820 1.82920 1.44773 1.10038 1.10394 0.75298 0.87043 1.20064 1.17798 0.85332 0.74636 0.92208 0.91004 0.85866 0.88619 0.74769 0.89137 0.85395 0.77548 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.52 12.85 -148.98 -1.91 -2.43 16 2 C -0.04 0.03 2.95 71.24 0.21 0.24 16 3 Si 0.74 -3.05 30.91 68.60 2.12 -0.93 16 4 C -0.25 0.11 5.69 24.51 0.14 0.25 16 5 C -0.08 -0.36 9.91 22.67 0.22 -0.14 16 6 C -0.18 -0.36 5.98 -19.87 -0.12 -0.48 16 7 C 0.57 3.47 7.79 86.59 0.67 4.14 16 8 O -0.59 -9.73 16.80 -4.14 -0.07 -9.80 16 9 N -0.71 1.77 5.52 -466.61 -2.58 -0.81 16 10 C 0.13 -0.18 5.26 86.38 0.45 0.28 16 11 C -0.10 0.82 3.94 -10.27 -0.04 0.77 16 12 H 0.13 -1.65 8.14 -2.39 -0.02 -1.67 16 13 C -0.14 1.21 6.91 31.12 0.21 1.42 16 14 C 0.06 -0.21 1.36 -10.27 -0.01 -0.23 16 15 O -0.52 0.65 11.45 -148.98 -1.71 -1.06 16 16 C 0.43 -0.15 2.85 71.98 0.21 0.06 16 17 F -0.17 0.13 15.75 44.97 0.71 0.84 16 18 F -0.19 -0.22 16.65 44.97 0.75 0.53 16 19 F -0.19 -0.72 17.18 44.97 0.77 0.05 16 20 C -0.11 0.65 6.86 31.12 0.21 0.87 16 21 C -0.19 1.15 10.38 67.30 0.70 1.85 16 22 S 0.25 -1.63 20.18 -56.49 -1.14 -2.77 16 23 H 0.40 -3.01 8.70 -74.06 -0.64 -3.65 16 24 H 0.11 0.11 7.96 -2.39 -0.02 0.09 16 25 H -0.27 -0.80 7.11 99.48 0.71 -0.10 16 26 H -0.25 0.35 7.11 99.48 0.71 1.06 16 27 H 0.13 1.21 8.06 -2.91 -0.02 1.18 16 28 H 0.42 -4.29 6.97 -92.70 -0.65 -4.93 16 29 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 30 H 0.07 0.23 6.12 -2.38 -0.01 0.21 16 31 H 0.12 -1.32 7.13 -2.39 -0.02 -1.34 16 32 H 0.10 -0.80 8.10 -2.39 -0.02 -0.82 16 33 H 0.40 -2.57 8.42 -74.06 -0.62 -3.19 16 34 H 0.09 -0.32 8.10 -2.39 -0.02 -0.34 16 35 H 0.13 -1.12 7.88 -2.39 -0.02 -1.14 16 36 H 0.21 -2.96 7.01 -2.91 -0.02 -2.98 16 Total: 0.00 -23.98 332.11 -0.89 -24.86 By element: Atomic # 1 Polarization: -16.81 SS G_CDS: -0.69 Total: -17.51 kcal Atomic # 6 Polarization: 6.17 SS G_CDS: 2.86 Total: 9.03 kcal Atomic # 7 Polarization: 1.77 SS G_CDS: -2.58 Total: -0.81 kcal Atomic # 8 Polarization: -9.60 SS G_CDS: -3.69 Total: -13.29 kcal Atomic # 9 Polarization: -0.81 SS G_CDS: 2.23 Total: 1.42 kcal Atomic # 14 Polarization: -3.05 SS G_CDS: 2.12 Total: -0.93 kcal Atomic # 16 Polarization: -1.63 SS G_CDS: -1.14 Total: -2.77 kcal Total: -23.98 -0.89 -24.86 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_6894386.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -180.391 kcal (2) G-P(sol) polarization free energy of solvation -23.976 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -204.367 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.862 kcal (6) G-S(sol) free energy of system = (1) + (5) -205.253 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds