Wall clock time and date at job start Tue Mar 9 2021 13:48:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38232 * 119.94053 * 300.00214 * 4 2 1 6 6 C 1.38196 * 120.07537 * 179.97438 * 5 4 2 7 7 C 1.38662 * 119.95869 * 0.02562 * 6 5 4 8 8 O 1.35927 * 120.05887 * 179.97438 * 7 6 5 9 9 C 1.42896 * 117.00169 * 0.02562 * 8 7 6 10 10 C 1.53000 * 109.47421 * 179.97438 * 9 8 7 11 11 N 1.46496 * 109.47251 * 179.97438 * 10 9 8 12 12 C 1.34815 * 126.59325 * 125.00209 * 11 10 9 13 13 C 1.36597 * 106.84277 * 179.97438 * 12 11 10 14 14 C 1.47525 * 125.77151 * 180.02562 * 13 12 11 15 15 O 1.21597 * 119.99651 * 359.97438 * 14 13 12 16 16 N 1.34771 * 119.99655 * 179.97438 * 14 13 12 17 17 C 1.46504 * 119.99671 * 179.97438 * 16 14 13 18 18 C 1.52996 * 109.47173 * 180.02562 * 17 16 14 19 19 H 1.08997 * 112.85501 * 43.80172 * 18 17 16 20 20 C 1.53781 * 113.61692 * 175.00332 * 18 17 16 21 21 C 1.53782 * 87.08382 * 89.11461 * 20 18 17 22 22 O 1.42904 * 113.61620 * 270.88860 * 21 20 18 23 23 C 1.52999 * 113.61562 * 140.06567 * 21 20 18 24 24 F 1.39904 * 109.47111 * 60.00126 * 23 21 20 25 25 F 1.39905 * 109.47344 * 180.02562 * 23 21 20 26 26 F 1.39902 * 109.47054 * 300.00268 * 23 21 20 27 27 C 1.53788 * 87.08115 * 25.43472 * 21 20 18 28 28 N 1.34401 * 108.45648 * 0.02562 * 13 12 11 29 29 N 1.28767 * 109.52229 * 359.74862 * 28 13 12 30 30 C 1.38852 * 119.88103 * 0.02562 * 7 6 5 31 31 Cl 1.73604 * 120.03790 * 180.02562 * 30 7 6 32 32 C 1.38212 * 119.92193 * 359.70089 * 30 7 6 33 33 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 34 34 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 35 35 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 36 36 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 37 37 H 1.07995 * 119.96202 * 359.97438 * 5 4 2 38 38 H 1.08001 * 120.02193 * 179.97438 * 6 5 4 39 39 H 1.09001 * 109.47049 * 299.99844 * 9 8 7 40 40 H 1.09005 * 109.47423 * 59.99916 * 9 8 7 41 41 H 1.09001 * 109.47337 * 300.00226 * 10 9 8 42 42 H 1.09008 * 109.46936 * 59.99939 * 10 9 8 43 43 H 1.08010 * 126.57733 * 359.97438 * 12 11 10 44 44 H 0.96998 * 120.00734 * 359.97438 * 16 14 13 45 45 H 1.09003 * 109.47214 * 300.00306 * 17 16 14 46 46 H 1.09002 * 109.47270 * 60.00431 * 17 16 14 47 47 H 1.09003 * 113.61650 * 203.66129 * 20 18 17 48 48 H 1.08996 * 113.61236 * 334.56325 * 20 18 17 49 49 H 0.96696 * 113.99728 * 180.02562 * 22 21 20 50 50 H 1.08998 * 113.61513 * 220.01876 * 27 21 20 51 51 H 1.08997 * 113.61380 * 89.11646 * 27 21 20 52 52 H 1.08005 * 119.97640 * 180.29444 * 32 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5965 -2.0337 -1.4482 6 6 2.0551 -2.6876 -2.5759 7 6 2.8524 -2.0156 -3.4899 8 8 3.3051 -2.6570 -4.5996 9 6 2.9202 -4.0236 -4.7614 10 6 3.5193 -4.5721 -6.0579 11 7 3.1252 -5.9733 -6.2235 12 6 2.5018 -6.5121 -7.2906 13 6 2.3301 -7.8399 -7.0198 14 6 1.6894 -8.8259 -7.9108 15 8 1.2587 -8.4775 -8.9932 16 7 1.5816 -10.1127 -7.5249 17 6 0.9449 -11.0917 -8.4094 18 6 0.9513 -12.4662 -7.7374 19 1 0.6720 -12.4241 -6.6847 20 6 0.1960 -13.5442 -8.5325 21 6 1.5237 -13.8313 -9.2533 22 8 1.7229 -13.0368 -10.4243 23 6 1.7806 -15.3201 -9.4948 24 9 0.7539 -15.8484 -10.2849 25 9 3.0053 -15.4816 -10.1516 26 9 1.8177 -15.9919 -8.2682 27 6 2.2305 -13.2768 -8.0051 28 7 2.8435 -8.0962 -5.8044 29 7 3.3282 -7.0129 -5.3049 30 6 3.1885 -0.6866 -3.2690 31 17 4.1860 0.1589 -4.4110 32 6 2.7225 -0.0357 -2.1423 33 1 -0.3934 0.4418 -0.7650 34 1 1.7923 -0.5138 0.8899 35 1 1.5616 2.4678 1.2086 36 1 3.5346 1.7703 -0.0322 37 1 0.9759 -2.5572 -0.7361 38 1 1.7934 -3.7217 -2.7449 39 1 3.2862 -4.6066 -3.9164 40 1 1.8332 -4.0921 -4.8065 41 1 3.1530 -3.9890 -6.9028 42 1 4.6063 -4.5037 -6.0133 43 1 2.1967 -5.9934 -8.1875 44 1 1.9255 -10.3907 -6.6616 45 1 -0.0835 -10.7887 -8.6063 46 1 1.4946 -11.1439 -9.3492 47 1 -0.1557 -14.3735 -7.9187 48 1 -0.5779 -13.1424 -9.1865 49 1 2.5561 -13.2131 -10.8822 50 1 3.0991 -12.6592 -8.2334 51 1 2.4350 -14.0329 -7.2471 52 1 2.9794 0.9994 -1.9720 There are 84 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 84 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664666_7143556.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:36 Heat of formation + Delta-G solvation = -146.473524 kcal Electronic energy + Delta-G solvation = -44079.787150 eV Core-core repulsion = 37468.148036 eV Total energy + Delta-G solvation = -6611.639114 eV No. of doubly occupied orbitals = 84 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 477.116 amu Computer time = 1.75 seconds Orbital eigenvalues (eV) -51.22090 -48.76572 -48.70476 -43.35411 -41.52776 -41.30458 -40.14996 -39.46281 -37.76217 -37.08052 -36.61582 -36.14522 -35.12977 -32.50852 -32.18934 -32.00954 -30.80531 -29.79827 -27.28482 -27.07180 -26.66947 -25.77195 -24.49858 -23.96510 -23.28902 -22.85518 -22.43530 -21.49417 -20.62294 -20.04074 -19.78200 -19.50772 -19.40021 -18.86881 -18.33020 -17.84297 -17.51819 -17.32190 -17.09452 -16.99031 -16.94323 -16.63257 -16.26033 -16.12299 -16.04241 -15.83939 -15.62632 -15.57086 -15.45557 -15.43342 -15.34964 -15.15037 -15.05383 -14.88991 -14.87932 -14.81311 -14.60095 -14.44405 -14.32009 -13.97615 -13.81202 -13.73345 -13.44447 -13.40947 -13.16683 -12.95763 -12.62269 -12.56582 -12.44114 -12.37402 -12.30570 -12.09836 -11.97825 -11.95245 -11.83104 -11.57210 -11.48822 -11.37060 -11.07695 -10.51471 -10.48320 -10.06735 -10.05457 -9.33749 -5.03335 -0.02183 0.02215 0.03268 0.54300 0.72120 1.07681 1.27922 1.55634 1.59762 1.93792 1.95305 2.04096 2.18629 2.37555 2.49376 2.61791 2.71656 2.94462 3.10007 3.20735 3.39416 3.45179 3.47270 3.49415 3.54601 3.56477 3.69734 3.76086 3.77574 3.83643 3.89496 3.97800 4.04529 4.07438 4.28746 4.40731 4.42729 4.43840 4.45269 4.50160 4.55374 4.59820 4.67393 4.76760 4.77470 4.80100 4.89782 4.92918 5.00285 5.14675 5.24627 5.27918 5.37895 5.42189 5.99554 6.31248 6.36139 6.75697 6.80417 7.09319 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.061 4.061 3 Si 0.757 3.243 4 C -0.142 4.142 5 C -0.049 4.049 6 C -0.194 4.194 7 C 0.138 3.862 8 O -0.304 6.304 9 C 0.047 3.953 10 C 0.123 3.877 11 N -0.351 5.351 12 C 0.118 3.882 13 C -0.122 4.122 14 C 0.605 3.395 15 O -0.568 6.568 16 N -0.705 5.705 17 C 0.134 3.866 18 C -0.104 4.104 19 H 0.119 0.881 20 C -0.109 4.109 21 C 0.061 3.939 22 O -0.519 6.519 23 C 0.430 3.570 24 F -0.187 7.187 25 F -0.189 7.189 26 F -0.177 7.177 27 C -0.147 4.147 28 N -0.214 5.214 29 N -0.084 5.084 30 C -0.076 4.076 31 Cl -0.057 7.057 32 C -0.073 4.073 33 H 0.396 0.604 34 H 0.114 0.886 35 H -0.295 1.295 36 H -0.285 1.285 37 H 0.146 0.854 38 H 0.153 0.847 39 H 0.079 0.921 40 H 0.083 0.917 41 H 0.151 0.849 42 H 0.122 0.878 43 H 0.238 0.762 44 H 0.416 0.584 45 H 0.068 0.932 46 H 0.079 0.921 47 H 0.125 0.875 48 H 0.095 0.905 49 H 0.401 0.599 50 H 0.094 0.906 51 H 0.118 0.882 52 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.074 2.795 0.655 3.065 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.171 4.171 3 Si 0.664 3.336 4 C -0.143 4.143 5 C -0.067 4.067 6 C -0.212 4.212 7 C 0.091 3.909 8 O -0.217 6.217 9 C -0.029 4.029 10 C 0.003 3.997 11 N -0.136 5.136 12 C -0.039 4.039 13 C -0.262 4.262 14 C 0.389 3.611 15 O -0.446 6.446 16 N -0.355 5.355 17 C 0.011 3.989 18 C -0.122 4.122 19 H 0.137 0.863 20 C -0.147 4.147 21 C 0.017 3.983 22 O -0.328 6.328 23 C 0.375 3.625 24 F -0.168 7.168 25 F -0.170 7.170 26 F -0.158 7.158 27 C -0.184 4.184 28 N -0.088 5.088 29 N -0.064 5.064 30 C -0.104 4.104 31 Cl -0.028 7.028 32 C -0.092 4.092 33 H 0.246 0.754 34 H 0.132 0.868 35 H -0.223 1.223 36 H -0.212 1.212 37 H 0.163 0.837 38 H 0.171 0.829 39 H 0.097 0.903 40 H 0.101 0.899 41 H 0.169 0.831 42 H 0.140 0.860 43 H 0.254 0.746 44 H 0.253 0.747 45 H 0.086 0.914 46 H 0.098 0.902 47 H 0.143 0.857 48 H 0.114 0.886 49 H 0.253 0.747 50 H 0.113 0.887 51 H 0.136 0.864 52 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -0.584 3.323 2.108 3.978 hybrid contribution 0.714 -1.133 -0.684 1.504 sum 0.130 2.190 1.424 2.616 Atomic orbital electron populations 1.86483 1.16898 1.82044 1.50609 1.24958 0.85417 1.09963 0.96794 0.93915 0.78262 0.76111 0.85339 1.20246 1.00863 0.95500 0.97723 1.21099 0.96137 0.93412 0.96046 1.21459 1.01942 1.01896 0.95946 1.18674 0.94450 0.90478 0.87253 1.85995 1.70586 1.25574 1.39511 1.22961 1.00992 0.80248 0.98696 1.21917 1.03726 0.73814 1.00222 1.50335 1.39721 1.10487 1.13055 1.23920 0.92353 0.93610 0.94003 1.21472 1.13891 0.95047 0.95784 1.16845 0.77937 0.81980 0.84303 1.90834 1.50665 1.80070 1.23045 1.45699 1.60032 1.07411 1.22402 1.21312 0.98456 0.85842 0.93311 1.22299 0.96149 0.92056 1.01712 0.86344 1.23215 0.93895 1.00035 0.97558 1.23788 1.03384 0.82298 0.88788 1.86624 1.46360 1.60607 1.39205 1.21623 0.73768 0.93081 0.73980 1.93202 1.59664 1.88835 1.75145 1.93174 1.45459 1.96604 1.81764 1.93178 1.96129 1.82861 1.43658 1.23816 0.98622 1.00678 0.95313 1.74612 1.07194 1.19652 1.07373 1.81994 1.21894 0.89167 1.13353 1.20206 1.03296 0.91225 0.95641 1.98391 1.67894 1.76865 1.59629 1.20913 0.96431 1.00291 0.91520 0.75363 0.86831 1.22290 1.21163 0.83673 0.82937 0.90250 0.89905 0.83138 0.85969 0.74627 0.74742 0.91363 0.90243 0.85684 0.88619 0.74716 0.88737 0.86379 0.82984 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.52 12.77 -148.98 -1.90 -0.38 16 2 C -0.06 0.19 2.82 71.24 0.20 0.39 16 3 Si 0.76 -2.51 29.78 68.60 2.04 -0.47 16 4 C -0.14 0.39 5.39 -19.85 -0.11 0.28 16 5 C -0.05 0.14 9.60 22.26 0.21 0.36 16 6 C -0.19 0.61 9.04 22.36 0.20 0.81 16 7 C 0.14 -0.14 6.68 22.52 0.15 0.01 16 8 O -0.30 0.87 9.60 -92.72 -0.89 -0.02 16 9 C 0.05 -0.35 4.95 71.98 0.36 0.01 16 10 C 0.12 -1.23 6.91 86.38 0.60 -0.64 16 11 N -0.35 1.54 3.69 -347.09 -1.28 0.26 16 12 C 0.12 -0.47 11.27 83.85 0.95 0.48 16 13 C -0.12 -0.19 6.99 40.82 0.29 0.10 16 14 C 0.60 2.35 7.82 86.69 0.68 3.02 16 15 O -0.57 -5.58 16.86 -4.02 -0.07 -5.65 16 16 N -0.70 0.53 5.55 -466.27 -2.59 -2.06 16 17 C 0.13 -0.22 5.26 86.38 0.45 0.23 16 18 C -0.10 0.69 3.94 -10.27 -0.04 0.64 16 19 H 0.12 -1.15 8.14 -2.39 -0.02 -1.17 16 20 C -0.11 0.60 6.86 31.12 0.21 0.81 16 21 C 0.06 -0.21 1.36 -10.26 -0.01 -0.23 16 22 O -0.52 1.15 11.44 -148.98 -1.70 -0.55 16 23 C 0.43 0.01 2.85 71.98 0.21 0.21 16 24 F -0.19 -0.69 17.18 44.97 0.77 0.08 16 25 F -0.19 -0.26 16.65 44.97 0.75 0.48 16 26 F -0.18 -0.06 15.76 44.97 0.71 0.65 16 27 C -0.15 0.95 6.91 31.13 0.22 1.17 16 28 N -0.21 -0.71 12.04 -49.99 -0.60 -1.31 16 29 N -0.08 -0.18 13.65 37.02 0.51 0.33 16 30 C -0.08 -0.02 6.33 22.41 0.14 0.12 16 31 Cl -0.06 -0.07 28.51 -2.72 -0.08 -0.15 16 32 C -0.07 0.15 8.45 22.28 0.19 0.33 16 33 H 0.40 -4.17 8.70 -74.05 -0.64 -4.81 16 34 H 0.11 -0.29 7.96 -2.39 -0.02 -0.31 16 35 H -0.30 -1.23 7.11 99.48 0.71 -0.53 16 36 H -0.28 -0.48 7.11 99.48 0.71 0.22 16 37 H 0.15 -0.68 8.06 -2.91 -0.02 -0.70 16 38 H 0.15 -0.98 6.30 -2.91 -0.02 -1.00 16 39 H 0.08 -0.48 7.66 -2.39 -0.02 -0.49 16 40 H 0.08 -0.72 7.66 -2.38 -0.02 -0.73 16 41 H 0.15 -2.32 8.08 -2.39 -0.02 -2.34 16 42 H 0.12 -1.31 8.14 -2.38 -0.02 -1.33 16 43 H 0.24 -2.48 8.06 -2.91 -0.02 -2.50 16 44 H 0.42 -1.53 8.16 -92.71 -0.76 -2.29 16 45 H 0.07 0.02 8.14 -2.39 -0.02 0.00 16 46 H 0.08 0.11 6.12 -2.39 -0.01 0.10 16 47 H 0.13 -0.98 7.88 -2.39 -0.02 -1.00 16 48 H 0.10 -0.41 8.10 -2.39 -0.02 -0.43 16 49 H 0.40 -2.95 8.42 -74.06 -0.62 -3.57 16 50 H 0.09 -0.59 8.10 -2.39 -0.02 -0.61 16 51 H 0.12 -0.94 7.14 -2.39 -0.02 -0.96 16 52 H 0.15 -0.71 4.88 -2.91 -0.01 -0.72 16 Total: 0.00 -25.48 466.83 -0.36 -25.84 By element: Atomic # 1 Polarization: -24.26 SS G_CDS: -0.91 Total: -25.18 kcal Atomic # 6 Polarization: 3.25 SS G_CDS: 4.88 Total: 8.13 kcal Atomic # 7 Polarization: 1.18 SS G_CDS: -3.97 Total: -2.79 kcal Atomic # 8 Polarization: -2.04 SS G_CDS: -4.56 Total: -6.60 kcal Atomic # 9 Polarization: -1.02 SS G_CDS: 2.23 Total: 1.21 kcal Atomic # 14 Polarization: -2.51 SS G_CDS: 2.04 Total: -0.47 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -0.08 Total: -0.15 kcal Total: -25.48 -0.36 -25.84 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_7143556.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.631 kcal (2) G-P(sol) polarization free energy of solvation -25.480 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -146.112 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.362 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.842 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.474 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.75 seconds