Wall clock time and date at job start Tue Mar 9 2021 13:48:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86299 * 109.47431 * 2 1 4 4 C 1.50698 * 109.47727 * 120.00422 * 2 1 3 5 5 C 1.34231 * 126.50086 * 255.31604 * 4 2 1 6 6 N 1.36834 * 109.93897 * 180.16387 * 5 4 2 7 7 C 1.46496 * 125.06558 * 179.81546 * 6 5 4 8 8 C 1.50702 * 109.47283 * 264.69621 * 7 6 5 9 9 O 1.21282 * 119.99684 * 359.97438 * 8 7 6 10 10 N 1.34769 * 120.00461 * 179.97438 * 8 7 6 11 11 C 1.46500 * 120.00237 * 180.02562 * 10 8 7 12 12 C 1.53006 * 109.46998 * 180.02562 * 11 10 8 13 13 H 1.08995 * 112.85092 * 316.19521 * 12 11 10 14 14 C 1.53783 * 113.61172 * 87.50262 * 12 11 10 15 15 C 1.53786 * 87.07879 * 89.11599 * 14 12 11 16 16 O 1.42904 * 113.61313 * 270.87839 * 15 14 12 17 17 C 1.53002 * 113.69060 * 139.99165 * 15 14 12 18 18 F 1.39903 * 109.46967 * 322.46117 * 17 15 14 19 19 F 1.39895 * 109.47164 * 82.46018 * 17 15 14 20 20 F 1.39900 * 109.47134 * 202.46593 * 17 15 14 21 21 C 1.53781 * 113.61256 * 185.00048 * 12 11 10 22 22 C 1.37692 * 109.87575 * 359.54849 * 6 5 4 23 23 C 1.39083 * 133.51857 * 180.24074 * 22 6 5 24 24 C 1.37788 * 119.77820 * 180.02562 * 23 22 6 25 25 C 1.38782 * 120.66987 * 359.97438 * 24 23 22 26 26 C 1.36666 * 120.52772 * 0.02562 * 25 24 23 27 27 C 1.39586 * 119.76158 * 359.97438 * 26 25 24 28 28 H 0.96700 * 113.99390 * 299.99707 * 1 2 3 29 29 H 1.09007 * 109.46431 * 240.00125 * 2 1 3 30 30 H 1.48503 * 109.99718 * 300.00608 * 3 2 1 31 31 H 1.48506 * 109.99824 * 61.32136 * 3 2 1 32 32 H 1.07999 * 125.03274 * 0.02562 * 5 4 2 33 33 H 1.08996 * 109.47565 * 144.69306 * 7 6 5 34 34 H 1.09004 * 109.47374 * 24.69501 * 7 6 5 35 35 H 0.97010 * 119.99854 * 0.02562 * 10 8 7 36 36 H 1.08993 * 109.47452 * 60.00368 * 11 10 8 37 37 H 1.09000 * 109.47175 * 300.00158 * 11 10 8 38 38 H 1.09004 * 113.60840 * 203.66105 * 14 12 11 39 39 H 1.08994 * 113.61869 * 334.56697 * 14 12 11 40 40 H 0.96696 * 113.99757 * 277.50308 * 16 15 14 41 41 H 1.09007 * 113.61569 * 25.43116 * 21 12 11 42 42 H 1.08999 * 113.61371 * 156.25011 * 21 12 11 43 43 H 1.07999 * 120.10934 * 0.05065 * 23 22 6 44 44 H 1.08003 * 119.66803 * 180.02562 * 24 23 22 45 45 H 1.08006 * 119.74105 * 180.02562 * 25 24 23 46 46 H 1.08001 * 120.11759 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9315 -0.7105 1.2303 5 6 2.4556 -0.1374 2.3252 6 7 2.8030 -1.0992 3.2344 7 6 3.4078 -0.8407 4.5434 8 6 4.9061 -0.9630 4.4375 9 8 5.4182 -1.2394 3.3734 10 7 5.6770 -0.7653 5.5251 11 6 7.1335 -0.8837 5.4221 12 6 7.7652 -0.6138 6.7893 13 1 7.3254 0.2447 7.2967 14 6 7.8744 -1.8660 7.6753 15 6 9.2486 -2.1075 7.0286 16 8 9.1904 -2.8949 5.8376 17 6 10.3136 -2.5963 8.0124 18 9 10.1435 -1.9513 9.2422 19 9 10.1862 -3.9782 8.1890 20 9 11.5849 -2.3060 7.5057 21 6 9.3027 -0.5935 6.7643 22 6 2.4941 -2.3459 2.7382 23 6 2.6294 -3.6364 3.2388 24 6 2.2159 -4.7109 2.4818 25 6 1.6641 -4.5194 1.2229 26 6 1.5218 -3.2600 0.7115 27 6 1.9340 -2.1571 1.4612 28 1 -0.3932 0.4417 0.7651 29 1 1.7922 -0.5139 -0.8901 30 1 1.5614 2.4679 -1.2085 31 1 1.5880 2.4585 1.2243 32 1 2.5859 0.9253 2.4666 33 1 3.0342 -1.5661 5.2660 34 1 3.1478 0.1658 4.8715 35 1 5.2673 -0.5445 6.3764 36 1 7.5068 -0.1581 4.6994 37 1 7.3940 -1.8900 5.0942 38 1 7.9264 -1.6434 8.7411 39 1 7.1390 -2.6345 7.4377 40 1 9.1561 -3.8479 5.9975 41 1 9.7202 -0.3348 5.7911 42 1 9.7451 -0.0219 7.5801 43 1 3.0569 -3.7957 4.2177 44 1 2.3215 -5.7122 2.8724 45 1 1.3447 -5.3724 0.6425 46 1 1.0919 -3.1187 -0.2691 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664666_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:45 Heat of formation + Delta-G solvation = -161.635343 kcal Electronic energy + Delta-G solvation = -35755.795030 eV Core-core repulsion = 30392.133635 eV Total energy + Delta-G solvation = -5363.661395 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.133 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -51.28452 -48.83840 -48.73376 -42.49021 -41.55281 -40.33966 -38.03907 -37.62863 -36.77765 -35.31402 -34.06192 -31.54995 -30.34099 -30.11599 -28.89878 -27.42926 -27.03536 -25.50822 -23.73630 -23.50625 -22.58959 -21.75847 -20.88438 -20.54639 -20.18416 -19.57142 -19.47734 -18.60895 -18.43021 -17.77271 -17.43916 -17.33480 -16.76616 -16.59311 -16.32903 -16.29925 -16.01687 -15.70114 -15.56659 -15.52178 -15.37345 -15.20362 -15.17893 -14.92174 -14.88670 -14.68714 -14.63817 -14.60173 -14.39318 -14.18052 -13.99628 -13.74416 -13.58394 -13.35625 -13.09374 -12.69970 -12.60298 -12.46109 -12.39253 -12.28553 -11.88374 -11.86196 -11.62978 -11.40489 -11.09185 -10.42672 -10.35307 -10.24743 -9.02905 -8.53708 -4.86254 0.27366 0.79250 1.38347 1.39304 1.41213 1.41895 1.61789 1.69771 2.02566 2.05230 2.23711 2.47190 2.51967 2.71392 3.07009 3.11972 3.24510 3.35327 3.44334 3.47433 3.58105 3.61781 3.73672 3.79812 3.85454 4.05115 4.06124 4.18234 4.21673 4.31170 4.36504 4.42959 4.51515 4.59179 4.59740 4.65674 4.72126 4.80886 4.90217 4.91762 4.99355 5.19225 5.25429 5.64277 5.80495 5.86045 5.89765 5.96745 6.13215 6.30179 6.36094 6.59585 6.99695 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.037 4.037 3 Si 0.683 3.317 4 C -0.192 4.192 5 C 0.066 3.934 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.490 3.510 9 O -0.509 6.509 10 N -0.729 5.729 11 C 0.132 3.868 12 C -0.112 4.112 13 H 0.100 0.900 14 C -0.154 4.154 15 C 0.062 3.938 16 O -0.507 6.507 17 C 0.432 3.568 18 F -0.175 7.175 19 F -0.183 7.183 20 F -0.174 7.174 21 C -0.109 4.109 22 C 0.109 3.891 23 C -0.128 4.128 24 C -0.096 4.096 25 C -0.146 4.146 26 C -0.065 4.065 27 C -0.086 4.086 28 H 0.372 0.628 29 H 0.114 0.886 30 H -0.256 1.256 31 H -0.261 1.261 32 H 0.168 0.832 33 H 0.117 0.883 34 H 0.122 0.878 35 H 0.401 0.599 36 H 0.075 0.925 37 H 0.091 0.909 38 H 0.109 0.891 39 H 0.092 0.908 40 H 0.392 0.608 41 H 0.100 0.900 42 H 0.113 0.887 43 H 0.114 0.886 44 H 0.125 0.875 45 H 0.123 0.877 46 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.191 2.318 6.279 6.696 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.148 4.148 3 Si 0.584 3.416 4 C -0.200 4.200 5 C -0.059 4.059 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.274 3.726 9 O -0.383 6.383 10 N -0.383 5.383 11 C 0.009 3.991 12 C -0.131 4.131 13 H 0.118 0.882 14 C -0.191 4.191 15 C 0.018 3.982 16 O -0.314 6.314 17 C 0.378 3.622 18 F -0.157 7.157 19 F -0.164 7.164 20 F -0.155 7.155 21 C -0.147 4.147 22 C 0.005 3.995 23 C -0.148 4.148 24 C -0.116 4.116 25 C -0.165 4.165 26 C -0.083 4.083 27 C -0.090 4.090 28 H 0.219 0.781 29 H 0.132 0.868 30 H -0.180 1.180 31 H -0.185 1.185 32 H 0.185 0.815 33 H 0.135 0.865 34 H 0.139 0.861 35 H 0.235 0.765 36 H 0.093 0.907 37 H 0.109 0.891 38 H 0.127 0.873 39 H 0.111 0.889 40 H 0.243 0.757 41 H 0.118 0.882 42 H 0.131 0.869 43 H 0.132 0.868 44 H 0.143 0.857 45 H 0.141 0.859 46 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 0.637 3.287 4.948 5.975 hybrid contribution -0.761 -0.830 1.702 2.041 sum -0.123 2.457 6.650 7.090 Atomic orbital electron populations 1.86608 1.18159 1.79972 1.48946 1.24284 0.83275 1.09834 0.97370 0.95007 0.91793 0.74450 0.80353 1.20580 1.09847 0.92339 0.97244 1.21580 1.00926 0.93995 0.89412 1.43191 1.52464 1.04655 1.14590 1.21575 0.90877 1.05757 0.85241 1.20959 0.89409 0.77817 0.84460 1.90832 1.74543 1.45247 1.27638 1.45924 1.07450 1.72808 1.12084 1.21314 0.78369 1.04116 0.95321 1.22396 0.96002 0.98718 0.95976 0.88199 1.23810 0.94969 0.99327 1.01038 1.23641 0.93171 0.95376 0.86018 1.86651 1.95732 1.22686 1.26379 1.21291 0.83554 0.75558 0.81818 1.93188 1.95301 1.81400 1.45765 1.93190 1.95887 1.31641 1.95695 1.93234 1.42453 1.93008 1.86846 1.23124 0.96300 0.89620 1.05635 1.18168 1.01178 0.85842 0.94349 1.19942 1.05032 0.89248 1.00609 1.20822 0.98323 0.97921 0.94489 1.20674 1.02441 0.96949 0.96418 1.20312 0.97918 0.90916 0.99176 1.18940 1.03396 0.92784 0.93913 0.78052 0.86782 1.18038 1.18544 0.81458 0.86525 0.86052 0.76489 0.90691 0.89109 0.87289 0.88895 0.75732 0.88154 0.86851 0.86793 0.85746 0.85923 0.85902 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.34 12.88 -35.23 -0.45 -1.80 16 2 C -0.04 -0.05 3.06 36.00 0.11 0.06 16 3 Si 0.68 -0.12 30.83 -169.99 -5.24 -5.36 16 4 C -0.19 -0.45 5.57 -102.71 -0.57 -1.02 16 5 C 0.07 0.06 9.89 -16.73 -0.17 -0.11 16 6 N -0.47 -0.48 2.27 -115.71 -0.26 -0.74 16 7 C 0.09 -0.26 6.48 -5.19 -0.03 -0.30 16 8 C 0.49 -0.30 7.90 -10.99 -0.09 -0.39 16 9 O -0.51 -2.36 16.42 5.56 0.09 -2.27 16 10 N -0.73 2.64 5.56 -60.29 -0.33 2.31 16 11 C 0.13 -0.32 5.26 -4.04 -0.02 -0.34 16 12 C -0.11 0.52 3.94 -89.80 -0.35 0.17 16 13 H 0.10 -0.61 8.14 -51.93 -0.42 -1.04 16 14 C -0.15 0.68 6.91 -25.91 -0.18 0.50 16 15 C 0.06 -0.16 1.36 -89.80 -0.12 -0.28 16 16 O -0.51 0.94 11.44 -35.23 -0.40 0.54 16 17 C 0.43 -0.32 2.85 37.16 0.11 -0.22 16 18 F -0.18 0.09 15.77 2.25 0.04 0.13 16 19 F -0.18 0.01 16.65 2.25 0.04 0.05 16 20 F -0.17 -0.20 17.18 2.25 0.04 -0.16 16 21 C -0.11 0.38 6.86 -25.92 -0.18 0.20 16 22 C 0.11 0.35 6.80 -83.99 -0.57 -0.22 16 23 C -0.13 -0.30 10.00 -39.43 -0.39 -0.69 16 24 C -0.10 -0.20 10.01 -39.54 -0.40 -0.59 16 25 C -0.15 -0.37 9.97 -39.95 -0.40 -0.76 16 26 C -0.06 -0.23 10.05 -39.65 -0.40 -0.63 16 27 C -0.09 -0.35 6.35 -105.13 -0.67 -1.02 16 28 H 0.37 -0.20 8.70 45.56 0.40 0.19 16 29 H 0.11 0.15 7.96 -51.93 -0.41 -0.26 16 30 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 31 H -0.26 -0.16 6.99 56.52 0.40 0.23 16 32 H 0.17 -0.31 6.27 -52.49 -0.33 -0.64 16 33 H 0.12 -0.58 8.14 -51.93 -0.42 -1.00 16 34 H 0.12 -0.73 8.12 -51.93 -0.42 -1.15 16 35 H 0.40 -2.73 8.47 -40.82 -0.35 -3.08 16 36 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.09 -0.04 6.12 -51.93 -0.32 -0.35 16 38 H 0.11 -0.53 7.14 -51.93 -0.37 -0.91 16 39 H 0.09 -0.43 8.10 -51.93 -0.42 -0.85 16 40 H 0.39 -1.74 8.42 45.56 0.38 -1.36 16 41 H 0.10 -0.29 8.10 -51.93 -0.42 -0.71 16 42 H 0.11 -0.50 7.89 -51.93 -0.41 -0.91 16 43 H 0.11 0.04 8.06 -52.49 -0.42 -0.39 16 44 H 0.12 -0.02 8.06 -52.48 -0.42 -0.44 16 45 H 0.12 0.07 8.06 -52.48 -0.42 -0.35 16 46 H 0.12 0.32 8.06 -52.49 -0.42 -0.10 16 LS Contribution 398.30 15.07 6.00 6.00 Total: 0.00 -11.26 398.30 -9.64 -20.91 By element: Atomic # 1 Polarization: -9.14 SS G_CDS: -4.83 Total: -13.97 kcal Atomic # 6 Polarization: -1.32 SS G_CDS: -4.32 Total: -5.64 kcal Atomic # 7 Polarization: 2.16 SS G_CDS: -0.60 Total: 1.56 kcal Atomic # 8 Polarization: -2.76 SS G_CDS: -0.77 Total: -3.52 kcal Atomic # 9 Polarization: -0.09 SS G_CDS: 0.11 Total: 0.02 kcal Atomic # 14 Polarization: -0.12 SS G_CDS: -5.24 Total: -5.36 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -11.26 -9.64 -20.91 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664666_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.729 kcal (2) G-P(sol) polarization free energy of solvation -11.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.991 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.645 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.907 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.635 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds