Wall clock time and date at job start Tue Mar 9 2021 13:49:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86304 * 109.47043 * 2 1 4 4 C 1.50694 * 109.47213 * 120.00591 * 2 1 3 5 5 C 1.38392 * 119.83096 * 65.00147 * 4 2 1 6 6 C 1.37886 * 120.17472 * 179.97438 * 5 4 2 7 7 C 1.39837 * 119.82565 * 0.02562 * 6 5 4 8 8 C 1.47212 * 120.17042 * 179.97438 * 7 6 5 9 9 C 1.34811 * 119.99677 * 179.97438 * 8 7 6 10 10 C 1.46428 * 119.99584 * 179.97438 * 9 8 7 11 11 O 1.21698 * 120.00265 * 0.02562 * 10 9 8 12 12 N 1.34780 * 120.00062 * 179.97438 * 10 9 8 13 13 C 1.46500 * 120.00188 * 180.02562 * 12 10 9 14 14 C 1.52995 * 109.46714 * 180.02562 * 13 12 10 15 15 F 1.39898 * 109.47140 * 60.00406 * 14 13 12 16 16 C 1.53002 * 109.46925 * 179.97438 * 14 13 12 17 17 C 1.52997 * 109.47415 * 180.02562 * 16 14 13 18 18 C 1.53006 * 109.47164 * 300.00027 * 17 16 14 19 19 H 1.09000 * 109.47050 * 300.00004 * 18 17 16 20 20 C 1.52997 * 109.47164 * 179.97438 * 18 17 16 21 21 O 1.42899 * 109.47142 * 175.00200 * 20 18 17 22 22 C 1.52999 * 109.46626 * 59.99702 * 18 17 16 23 23 C 1.52996 * 109.47577 * 299.99871 * 14 13 12 24 24 C 1.39838 * 119.65997 * 0.24559 * 7 6 5 25 25 C 1.37886 * 119.82382 * 359.48097 * 24 7 6 26 26 H 0.96698 * 113.99900 * 299.99490 * 1 2 3 27 27 H 1.08999 * 109.47087 * 240.00553 * 2 1 3 28 28 H 1.48497 * 110.00449 * 300.00393 * 3 2 1 29 29 H 1.48508 * 109.99607 * 61.32398 * 3 2 1 30 30 H 1.08004 * 119.91347 * 0.02562 * 5 4 2 31 31 H 1.08001 * 120.09010 * 180.02562 * 6 5 4 32 32 H 1.08000 * 119.99885 * 359.97438 * 8 7 6 33 33 H 1.08000 * 120.00438 * 359.97438 * 9 8 7 34 34 H 0.97007 * 119.99247 * 0.02562 * 12 10 9 35 35 H 1.08999 * 109.46486 * 60.00408 * 13 12 10 36 36 H 1.08992 * 109.47085 * 300.00162 * 13 12 10 37 37 H 1.09000 * 109.46986 * 60.00086 * 16 14 13 38 38 H 1.09001 * 109.47601 * 300.00809 * 16 14 13 39 39 H 1.09001 * 109.46922 * 180.02562 * 17 16 14 40 40 H 1.09000 * 109.47140 * 59.99976 * 17 16 14 41 41 H 1.09001 * 109.47096 * 295.00066 * 20 18 17 42 42 H 1.08994 * 109.47065 * 55.00225 * 20 18 17 43 43 H 0.96693 * 114.00295 * 179.97438 * 21 20 18 44 44 H 1.09000 * 109.47160 * 60.00369 * 22 18 17 45 45 H 1.09002 * 109.46719 * 180.02562 * 22 18 17 46 46 H 1.09000 * 109.47054 * 300.00355 * 23 14 13 47 47 H 1.09001 * 109.46997 * 60.00088 * 23 14 13 48 48 H 1.07999 * 120.08315 * 179.74704 * 24 7 6 49 49 H 1.08002 * 119.91856 * 180.27084 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 1.6824 -2.0619 1.3947 6 6 2.1392 -2.7192 2.5175 7 6 2.8552 -2.0165 3.4917 8 6 3.3459 -2.7106 4.6936 9 6 4.0362 -2.0299 5.6304 10 6 4.5238 -2.7201 6.8261 11 8 4.3064 -3.9084 6.9741 12 7 5.2144 -2.0398 7.7625 13 6 5.7028 -2.7305 8.9586 14 6 6.4480 -1.7372 9.8524 15 9 5.5797 -0.7076 10.2304 16 6 6.9575 -2.4584 11.1019 17 6 7.7023 -1.4651 11.9961 18 6 8.8875 -0.8766 11.2279 19 1 9.5642 -1.6789 10.9338 20 6 9.6318 0.1171 12.1219 21 8 10.8040 0.5791 11.4477 22 6 8.3779 -0.1555 9.9785 23 6 7.6329 -1.1488 9.0838 24 6 3.0977 -0.6499 3.3211 25 6 2.6392 -0.0081 2.1901 26 1 -0.3933 0.4416 0.7651 27 1 1.7923 -0.5137 -0.8900 28 1 1.5614 2.4680 -1.2084 29 1 1.5878 2.4585 1.2244 30 1 1.1297 -2.6033 0.6412 31 1 1.9446 -3.7739 2.6441 32 1 3.1529 -3.7651 4.8249 33 1 4.2296 -0.9755 5.4989 34 1 5.3880 -1.0927 7.6443 35 1 6.3790 -3.5330 8.6640 36 1 4.8587 -3.1492 9.5064 37 1 7.6340 -3.2609 10.8078 38 1 6.1132 -2.8774 11.6494 39 1 8.0656 -1.9791 12.8860 40 1 7.0255 -0.6628 12.2902 41 1 8.9823 0.9641 12.3430 42 1 9.9175 -0.3741 13.0520 43 1 11.3261 1.2141 11.9567 44 1 7.7012 0.6468 10.2726 45 1 9.2223 0.2633 9.4310 46 1 8.3094 -1.9511 8.7893 47 1 7.2695 -0.6350 8.1938 48 1 3.6463 -0.0997 4.0711 49 1 2.8294 1.0464 2.0547 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664722_12360594.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:49:48 Heat of formation + Delta-G solvation = -137.405435 kcal Electronic energy + Delta-G solvation = -29871.960039 eV Core-core repulsion = 25486.371715 eV Total energy + Delta-G solvation = -4385.588324 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.173 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -48.81717 -40.91799 -40.46766 -39.63368 -37.94405 -37.43646 -35.87889 -35.08089 -32.76885 -32.26061 -32.06956 -31.30470 -28.65897 -27.02522 -25.16341 -24.31465 -24.10850 -23.44444 -22.01640 -21.81069 -20.87288 -20.48949 -18.95918 -18.34700 -18.24353 -17.58601 -17.33417 -16.89654 -16.75273 -16.38223 -16.20989 -16.18331 -16.00644 -15.81362 -15.61200 -15.36053 -15.14876 -14.69864 -14.61259 -14.55157 -14.38171 -14.11311 -13.98144 -13.83438 -13.62624 -13.33844 -13.28409 -13.10072 -13.05586 -12.78483 -12.31998 -12.28698 -12.18968 -12.11927 -11.66546 -11.63966 -11.36652 -11.33287 -11.21271 -10.95828 -10.90998 -10.65329 -10.17714 -10.06046 -9.31123 -5.01714 -0.58997 0.31307 0.87745 1.22102 1.53350 1.91189 2.07757 2.27348 2.75227 3.04814 3.20150 3.29791 3.31379 3.42009 3.49448 3.50295 3.59649 3.72504 3.81949 3.84296 3.91352 4.07988 4.10118 4.15201 4.17362 4.25504 4.28603 4.30643 4.36582 4.43576 4.49569 4.49753 4.51802 4.60718 4.71716 4.76632 4.81989 4.84225 4.89007 4.90188 4.99279 5.01986 5.07798 5.11359 5.23904 5.28037 5.33276 5.36333 5.40916 5.54856 5.81601 6.33587 6.42536 6.61808 7.20111 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.078 4.078 3 Si 0.687 3.313 4 C -0.106 4.106 5 C -0.094 4.094 6 C -0.092 4.092 7 C -0.073 4.073 8 C -0.014 4.014 9 C -0.214 4.214 10 C 0.549 3.451 11 O -0.542 6.542 12 N -0.724 5.724 13 C 0.101 3.899 14 C 0.112 3.888 15 F -0.201 7.201 16 C -0.135 4.135 17 C -0.115 4.115 18 C -0.090 4.090 19 H 0.080 0.920 20 C 0.079 3.921 21 O -0.574 6.574 22 C -0.112 4.112 23 C -0.139 4.139 24 C -0.095 4.095 25 C -0.120 4.120 26 H 0.376 0.624 27 H 0.120 0.880 28 H -0.257 1.257 29 H -0.260 1.260 30 H 0.130 0.870 31 H 0.132 0.868 32 H 0.138 0.862 33 H 0.131 0.869 34 H 0.404 0.596 35 H 0.088 0.912 36 H 0.081 0.919 37 H 0.086 0.914 38 H 0.082 0.918 39 H 0.073 0.927 40 H 0.072 0.928 41 H 0.046 0.954 42 H 0.046 0.954 43 H 0.381 0.619 44 H 0.067 0.933 45 H 0.077 0.923 46 H 0.085 0.915 47 H 0.074 0.926 48 H 0.132 0.868 49 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.966 2.773 1.706 5.131 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.188 4.188 3 Si 0.588 3.412 4 C -0.106 4.106 5 C -0.112 4.112 6 C -0.110 4.110 7 C -0.073 4.073 8 C -0.034 4.034 9 C -0.235 4.235 10 C 0.339 3.661 11 O -0.421 6.421 12 N -0.376 5.376 13 C -0.024 4.024 14 C 0.094 3.906 15 F -0.182 7.182 16 C -0.173 4.173 17 C -0.152 4.152 18 C -0.108 4.108 19 H 0.098 0.902 20 C 0.001 3.999 21 O -0.379 6.379 22 C -0.149 4.149 23 C -0.177 4.177 24 C -0.113 4.113 25 C -0.138 4.138 26 H 0.224 0.776 27 H 0.138 0.862 28 H -0.182 1.182 29 H -0.185 1.185 30 H 0.148 0.852 31 H 0.150 0.850 32 H 0.156 0.844 33 H 0.149 0.851 34 H 0.239 0.761 35 H 0.106 0.894 36 H 0.099 0.901 37 H 0.105 0.895 38 H 0.100 0.900 39 H 0.092 0.908 40 H 0.091 0.909 41 H 0.065 0.935 42 H 0.065 0.935 43 H 0.228 0.772 44 H 0.086 0.914 45 H 0.096 0.904 46 H 0.103 0.897 47 H 0.093 0.907 48 H 0.149 0.851 49 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 3.445 2.074 0.826 4.105 hybrid contribution -0.862 0.731 1.071 1.557 sum 2.583 2.806 1.897 4.259 Atomic orbital electron populations 1.86615 1.17555 1.79976 1.49324 1.25077 0.84083 1.11126 0.98469 0.94957 0.91619 0.74403 0.80233 1.20460 0.98665 0.94925 0.96544 1.21000 0.98791 0.93718 0.97716 1.21466 0.96216 1.00206 0.93111 1.19071 0.99744 0.93621 0.94832 1.22414 0.90752 1.00024 0.90194 1.22859 1.04303 1.00886 0.95411 1.18322 0.77801 0.86750 0.83252 1.90843 1.57406 1.15294 1.78575 1.45770 1.57084 1.13542 1.21236 1.21940 0.99568 0.94958 0.85897 1.21196 0.88582 0.85490 0.95364 1.92869 1.71513 1.61083 1.92699 1.22032 1.01535 0.98766 0.94992 1.21491 0.96628 0.98971 0.98118 1.21190 0.96270 0.97826 0.95519 0.90150 1.22205 0.86632 0.96648 0.94369 1.86458 1.38732 1.65292 1.47454 1.21519 1.00132 0.97674 0.95591 1.22157 0.96346 1.00540 0.98642 1.21359 0.98932 0.93611 0.97430 1.21004 0.98813 0.99823 0.94147 0.77593 0.86234 1.18152 1.18488 0.85170 0.85028 0.84415 0.85138 0.76075 0.89414 0.90072 0.89499 0.89978 0.90803 0.90892 0.93523 0.93524 0.77192 0.91382 0.90391 0.89657 0.90707 0.85068 0.85211 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.50 12.83 -35.23 -0.45 -0.95 16 2 C -0.08 0.05 2.80 36.00 0.10 0.15 16 3 Si 0.69 -0.96 29.87 -169.99 -5.08 -6.04 16 4 C -0.11 0.04 5.36 -104.50 -0.56 -0.52 16 5 C -0.09 0.00 9.66 -39.65 -0.38 -0.38 16 6 C -0.09 0.01 9.80 -39.11 -0.38 -0.37 16 7 C -0.07 0.00 5.87 -105.06 -0.62 -0.62 16 8 C -0.01 -0.01 9.46 -37.15 -0.35 -0.36 16 9 C -0.21 0.02 9.41 -37.50 -0.35 -0.33 16 10 C 0.55 1.19 7.74 -12.96 -0.10 1.08 16 11 O -0.54 -3.27 16.23 5.19 0.08 -3.19 16 12 N -0.72 0.11 5.18 -61.71 -0.32 -0.21 16 13 C 0.10 -0.03 4.88 -4.04 -0.02 -0.05 16 14 C 0.11 -0.14 0.85 -90.62 -0.08 -0.22 16 15 F -0.20 -0.18 15.63 2.25 0.04 -0.14 16 16 C -0.14 0.27 5.00 -26.73 -0.13 0.14 16 17 C -0.11 0.21 5.08 -26.73 -0.14 0.08 16 18 C -0.09 0.11 2.43 -90.62 -0.22 -0.11 16 19 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 20 C 0.08 -0.10 6.43 37.16 0.24 0.14 16 21 O -0.57 0.03 13.19 -35.23 -0.46 -0.43 16 22 C -0.11 0.11 4.98 -26.71 -0.13 -0.03 16 23 C -0.14 0.25 4.83 -26.71 -0.13 0.13 16 24 C -0.10 0.09 9.41 -39.11 -0.37 -0.28 16 25 C -0.12 0.12 8.65 -39.65 -0.34 -0.22 16 26 H 0.38 -0.68 8.70 45.56 0.40 -0.29 16 27 H 0.12 -0.16 7.96 -51.93 -0.41 -0.58 16 28 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 29 H -0.26 -0.11 7.00 56.52 0.40 0.29 16 30 H 0.13 -0.08 8.06 -52.48 -0.42 -0.50 16 31 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 32 H 0.14 0.13 7.52 -52.49 -0.39 -0.26 16 33 H 0.13 -0.36 6.07 -52.49 -0.32 -0.68 16 34 H 0.40 -0.87 7.24 -40.82 -0.30 -1.17 16 35 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 36 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 37 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 38 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 39 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 40 H 0.07 -0.08 7.80 -51.93 -0.41 -0.48 16 41 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 42 H 0.05 -0.09 8.14 -51.93 -0.42 -0.52 16 43 H 0.38 -1.52 9.12 45.56 0.42 -1.10 16 44 H 0.07 -0.02 7.80 -51.93 -0.41 -0.42 16 45 H 0.08 0.00 7.82 -51.93 -0.41 -0.41 16 46 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 47 H 0.07 -0.18 6.86 -51.93 -0.36 -0.54 16 48 H 0.13 -0.39 6.17 -52.49 -0.32 -0.72 16 49 H 0.13 -0.34 4.81 -52.49 -0.25 -0.59 16 LS Contribution 396.94 15.07 5.98 5.98 Total: 0.00 -8.94 396.94 -10.79 -19.74 By element: Atomic # 1 Polarization: -6.37 SS G_CDS: -6.61 Total: -12.98 kcal Atomic # 6 Polarization: 2.19 SS G_CDS: -3.97 Total: -1.77 kcal Atomic # 7 Polarization: 0.11 SS G_CDS: -0.32 Total: -0.21 kcal Atomic # 8 Polarization: -3.74 SS G_CDS: -0.83 Total: -4.57 kcal Atomic # 9 Polarization: -0.18 SS G_CDS: 0.04 Total: -0.14 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.08 Total: -6.04 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -8.94 -10.79 -19.74 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_12360594.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.668 kcal (2) G-P(sol) polarization free energy of solvation -8.944 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.612 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.794 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.738 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.405 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds