Wall clock time and date at job start Tue Mar 9 2021 13:49:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86304 * 109.47043 * 2 1 4 4 C 1.50694 * 109.47213 * 120.00591 * 2 1 3 5 5 C 1.38392 * 119.83096 * 65.00147 * 4 2 1 6 6 C 1.37886 * 120.17472 * 179.97438 * 5 4 2 7 7 C 1.39837 * 119.82565 * 0.02562 * 6 5 4 8 8 C 1.47212 * 120.17042 * 179.97438 * 7 6 5 9 9 C 1.34811 * 119.99677 * 179.97438 * 8 7 6 10 10 C 1.46428 * 119.99584 * 179.97438 * 9 8 7 11 11 O 1.21698 * 120.00265 * 0.02562 * 10 9 8 12 12 N 1.34780 * 120.00062 * 179.97438 * 10 9 8 13 13 C 1.46500 * 120.00188 * 180.02562 * 12 10 9 14 14 C 1.52995 * 109.46714 * 180.02562 * 13 12 10 15 15 F 1.39898 * 109.47140 * 60.00406 * 14 13 12 16 16 C 1.53002 * 109.46925 * 179.97438 * 14 13 12 17 17 C 1.52997 * 109.47415 * 180.02562 * 16 14 13 18 18 C 1.53006 * 109.47164 * 300.00027 * 17 16 14 19 19 H 1.09000 * 109.47050 * 300.00004 * 18 17 16 20 20 C 1.52997 * 109.47164 * 179.97438 * 18 17 16 21 21 O 1.42899 * 109.47142 * 175.00200 * 20 18 17 22 22 C 1.52999 * 109.46626 * 59.99702 * 18 17 16 23 23 C 1.52996 * 109.47577 * 299.99871 * 14 13 12 24 24 C 1.39838 * 119.65997 * 0.24559 * 7 6 5 25 25 C 1.37886 * 119.82382 * 359.48097 * 24 7 6 26 26 H 0.96698 * 113.99900 * 299.99490 * 1 2 3 27 27 H 1.08999 * 109.47087 * 240.00553 * 2 1 3 28 28 H 1.48497 * 110.00449 * 300.00393 * 3 2 1 29 29 H 1.48508 * 109.99607 * 61.32398 * 3 2 1 30 30 H 1.08004 * 119.91347 * 0.02562 * 5 4 2 31 31 H 1.08001 * 120.09010 * 180.02562 * 6 5 4 32 32 H 1.08000 * 119.99885 * 359.97438 * 8 7 6 33 33 H 1.08000 * 120.00438 * 359.97438 * 9 8 7 34 34 H 0.97007 * 119.99247 * 0.02562 * 12 10 9 35 35 H 1.08999 * 109.46486 * 60.00408 * 13 12 10 36 36 H 1.08992 * 109.47085 * 300.00162 * 13 12 10 37 37 H 1.09000 * 109.46986 * 60.00086 * 16 14 13 38 38 H 1.09001 * 109.47601 * 300.00809 * 16 14 13 39 39 H 1.09001 * 109.46922 * 180.02562 * 17 16 14 40 40 H 1.09000 * 109.47140 * 59.99976 * 17 16 14 41 41 H 1.09001 * 109.47096 * 295.00066 * 20 18 17 42 42 H 1.08994 * 109.47065 * 55.00225 * 20 18 17 43 43 H 0.96693 * 114.00295 * 179.97438 * 21 20 18 44 44 H 1.09000 * 109.47160 * 60.00369 * 22 18 17 45 45 H 1.09002 * 109.46719 * 180.02562 * 22 18 17 46 46 H 1.09000 * 109.47054 * 300.00355 * 23 14 13 47 47 H 1.09001 * 109.46997 * 60.00088 * 23 14 13 48 48 H 1.07999 * 120.08315 * 179.74704 * 24 7 6 49 49 H 1.08002 * 119.91856 * 180.27084 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 1.6824 -2.0619 1.3947 6 6 2.1392 -2.7192 2.5175 7 6 2.8552 -2.0165 3.4917 8 6 3.3459 -2.7106 4.6936 9 6 4.0362 -2.0299 5.6304 10 6 4.5238 -2.7201 6.8261 11 8 4.3064 -3.9084 6.9741 12 7 5.2144 -2.0398 7.7625 13 6 5.7028 -2.7305 8.9586 14 6 6.4480 -1.7372 9.8524 15 9 5.5797 -0.7076 10.2304 16 6 6.9575 -2.4584 11.1019 17 6 7.7023 -1.4651 11.9961 18 6 8.8875 -0.8766 11.2279 19 1 9.5642 -1.6789 10.9338 20 6 9.6318 0.1171 12.1219 21 8 10.8040 0.5791 11.4477 22 6 8.3779 -0.1555 9.9785 23 6 7.6329 -1.1488 9.0838 24 6 3.0977 -0.6499 3.3211 25 6 2.6392 -0.0081 2.1901 26 1 -0.3933 0.4416 0.7651 27 1 1.7923 -0.5137 -0.8900 28 1 1.5614 2.4680 -1.2084 29 1 1.5878 2.4585 1.2244 30 1 1.1297 -2.6033 0.6412 31 1 1.9446 -3.7739 2.6441 32 1 3.1529 -3.7651 4.8249 33 1 4.2296 -0.9755 5.4989 34 1 5.3880 -1.0927 7.6443 35 1 6.3790 -3.5330 8.6640 36 1 4.8587 -3.1492 9.5064 37 1 7.6340 -3.2609 10.8078 38 1 6.1132 -2.8774 11.6494 39 1 8.0656 -1.9791 12.8860 40 1 7.0255 -0.6628 12.2902 41 1 8.9823 0.9641 12.3430 42 1 9.9175 -0.3741 13.0520 43 1 11.3261 1.2141 11.9567 44 1 7.7012 0.6468 10.2726 45 1 9.2223 0.2633 9.4310 46 1 8.3094 -1.9511 8.7893 47 1 7.2695 -0.6350 8.1938 48 1 3.6463 -0.0997 4.0711 49 1 2.8294 1.0464 2.0547 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664722_12360594.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:49:47 Heat of formation + Delta-G solvation = -137.160915 kcal Electronic energy + Delta-G solvation = -29871.949436 eV Core-core repulsion = 25486.371715 eV Total energy + Delta-G solvation = -4385.577720 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.173 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -48.81953 -40.96903 -40.47823 -39.55004 -37.93399 -37.38066 -35.91996 -35.10646 -32.74064 -32.18265 -31.94565 -31.26294 -28.62299 -26.98070 -25.10124 -24.23473 -24.01821 -23.39479 -21.97125 -21.79168 -20.78881 -20.49088 -18.94685 -18.29635 -18.22033 -17.58029 -17.28726 -16.87539 -16.72317 -16.36055 -16.17622 -16.15174 -16.06632 -15.73885 -15.54980 -15.33557 -15.10283 -14.72310 -14.54187 -14.52279 -14.27646 -14.12724 -13.94255 -13.78297 -13.61889 -13.29753 -13.18630 -13.06558 -12.99229 -12.70186 -12.29634 -12.21423 -12.09112 -12.07605 -11.60260 -11.56342 -11.36756 -11.30153 -11.13308 -11.05457 -10.80512 -10.61959 -10.27242 -9.98596 -9.26957 -4.92351 -0.57175 0.39121 0.86552 1.30183 1.59071 1.95938 2.05562 2.19523 2.79772 3.16951 3.29798 3.38753 3.41327 3.52415 3.55863 3.60057 3.67498 3.79086 3.93414 3.94529 4.02614 4.15259 4.19275 4.22475 4.29186 4.35245 4.39515 4.43205 4.44304 4.54532 4.57550 4.59212 4.63633 4.66184 4.83273 4.83953 4.94131 4.96256 4.99554 5.01286 5.08338 5.11205 5.13769 5.22490 5.27499 5.33416 5.37766 5.46203 5.47287 5.58844 5.89458 6.40976 6.46064 6.88390 7.11260 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.087 4.087 3 Si 0.770 3.230 4 C -0.108 4.108 5 C -0.106 4.106 6 C -0.102 4.102 7 C -0.081 4.081 8 C -0.017 4.017 9 C -0.211 4.211 10 C 0.544 3.456 11 O -0.589 6.589 12 N -0.712 5.712 13 C 0.100 3.900 14 C 0.118 3.882 15 F -0.213 7.213 16 C -0.137 4.137 17 C -0.110 4.110 18 C -0.090 4.090 19 H 0.076 0.924 20 C 0.077 3.923 21 O -0.594 6.594 22 C -0.108 4.108 23 C -0.136 4.136 24 C -0.095 4.095 25 C -0.123 4.123 26 H 0.386 0.614 27 H 0.125 0.875 28 H -0.306 1.306 29 H -0.278 1.278 30 H 0.130 0.870 31 H 0.137 0.863 32 H 0.124 0.876 33 H 0.162 0.838 34 H 0.415 0.585 35 H 0.090 0.910 36 H 0.068 0.932 37 H 0.098 0.902 38 H 0.082 0.918 39 H 0.082 0.918 40 H 0.065 0.935 41 H 0.049 0.951 42 H 0.055 0.945 43 H 0.395 0.605 44 H 0.060 0.940 45 H 0.068 0.932 46 H 0.091 0.909 47 H 0.082 0.918 48 H 0.155 0.845 49 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.777 3.691 2.052 6.376 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.196 4.196 3 Si 0.676 3.324 4 C -0.109 4.109 5 C -0.124 4.124 6 C -0.120 4.120 7 C -0.082 4.082 8 C -0.037 4.037 9 C -0.231 4.231 10 C 0.335 3.665 11 O -0.472 6.472 12 N -0.364 5.364 13 C -0.024 4.024 14 C 0.099 3.901 15 F -0.193 7.193 16 C -0.175 4.175 17 C -0.148 4.148 18 C -0.108 4.108 19 H 0.094 0.906 20 C -0.001 4.001 21 O -0.402 6.402 22 C -0.145 4.145 23 C -0.174 4.174 24 C -0.113 4.113 25 C -0.141 4.141 26 H 0.235 0.765 27 H 0.142 0.858 28 H -0.235 1.235 29 H -0.205 1.205 30 H 0.148 0.852 31 H 0.155 0.845 32 H 0.142 0.858 33 H 0.179 0.821 34 H 0.253 0.747 35 H 0.108 0.892 36 H 0.087 0.913 37 H 0.116 0.884 38 H 0.101 0.899 39 H 0.101 0.899 40 H 0.084 0.916 41 H 0.067 0.933 42 H 0.073 0.927 43 H 0.245 0.755 44 H 0.079 0.921 45 H 0.087 0.913 46 H 0.110 0.890 47 H 0.101 0.899 48 H 0.173 0.827 49 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 4.282 3.014 1.204 5.373 hybrid contribution -1.132 0.467 0.954 1.553 sum 3.149 3.480 2.159 5.166 Atomic orbital electron populations 1.86583 1.18541 1.80420 1.50180 1.25307 0.83441 1.12103 0.98747 0.94027 0.90225 0.71824 0.76364 1.20533 0.98745 0.94823 0.96780 1.21092 0.99252 0.94166 0.97912 1.21619 0.96356 1.00733 0.93244 1.19119 1.00163 0.94250 0.94626 1.22379 0.91021 0.99607 0.90691 1.22967 1.03884 1.02100 0.94148 1.18726 0.77504 0.86297 0.84020 1.90820 1.59370 1.17329 1.79654 1.45719 1.55987 1.14042 1.20677 1.21948 0.99237 0.95366 0.85849 1.21213 0.88296 0.84957 0.95597 1.92848 1.72017 1.61642 1.92830 1.22074 1.01803 0.98981 0.94625 1.21453 0.96183 0.98765 0.98375 1.21197 0.96392 0.97719 0.95539 0.90568 1.22264 0.86447 0.96812 0.94562 1.86415 1.39296 1.65977 1.48540 1.21455 0.99626 0.97660 0.95784 1.22150 0.96038 1.00580 0.98638 1.21644 0.98543 0.93213 0.97893 1.21210 0.98400 1.00625 0.93845 0.76459 0.85763 1.23501 1.20481 0.85165 0.84477 0.85786 0.82060 0.74716 0.89184 0.91323 0.88381 0.89914 0.89892 0.91640 0.93286 0.92710 0.75498 0.92089 0.91307 0.89031 0.89914 0.82721 0.83494 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.15 12.83 -148.98 -1.91 -3.06 16 2 C -0.09 0.13 2.80 71.23 0.20 0.33 16 3 Si 0.77 -2.50 29.87 68.60 2.05 -0.45 16 4 C -0.11 0.13 5.36 -19.79 -0.11 0.02 16 5 C -0.11 -0.03 9.66 22.22 0.21 0.18 16 6 C -0.10 -0.03 9.80 22.57 0.22 0.19 16 7 C -0.08 0.02 5.87 -20.15 -0.12 -0.10 16 8 C -0.02 -0.02 9.46 23.84 0.23 0.21 16 9 C -0.21 0.16 9.41 23.62 0.22 0.38 16 10 C 0.54 2.50 7.74 86.37 0.67 3.17 16 11 O -0.59 -7.93 16.23 -4.34 -0.07 -8.00 16 12 N -0.71 0.39 5.18 -467.35 -2.42 -2.03 16 13 C 0.10 -0.04 4.88 86.38 0.42 0.38 16 14 C 0.12 -0.32 0.85 -10.80 -0.01 -0.33 16 15 F -0.21 -0.34 15.63 44.97 0.70 0.36 16 16 C -0.14 0.59 5.00 30.59 0.15 0.74 16 17 C -0.11 0.45 5.08 30.60 0.16 0.60 16 18 C -0.09 0.24 2.43 -10.79 -0.03 0.21 16 19 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 20 C 0.08 -0.20 6.43 71.98 0.46 0.26 16 21 O -0.59 0.16 13.19 -148.98 -1.97 -1.81 16 22 C -0.11 0.22 4.98 30.61 0.15 0.37 16 23 C -0.14 0.57 4.83 30.61 0.15 0.72 16 24 C -0.10 0.31 9.41 22.57 0.21 0.53 16 25 C -0.12 0.41 8.65 22.23 0.19 0.60 16 26 H 0.39 -1.34 8.70 -74.06 -0.64 -1.99 16 27 H 0.12 -0.35 7.96 -2.39 -0.02 -0.37 16 28 H -0.31 -1.58 7.11 99.48 0.71 -0.87 16 29 H -0.28 0.06 7.00 99.48 0.70 0.75 16 30 H 0.13 -0.06 8.06 -2.91 -0.02 -0.08 16 31 H 0.14 -0.26 8.06 -2.91 -0.02 -0.28 16 32 H 0.12 0.45 7.52 -2.91 -0.02 0.42 16 33 H 0.16 -1.26 6.07 -2.91 -0.02 -1.27 16 34 H 0.42 -2.22 7.24 -92.70 -0.67 -2.89 16 35 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 36 H 0.07 0.17 8.14 -2.39 -0.02 0.15 16 37 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 38 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 39 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 40 H 0.06 -0.15 7.80 -2.39 -0.02 -0.17 16 41 H 0.05 -0.17 8.14 -2.39 -0.02 -0.18 16 42 H 0.05 -0.25 8.14 -2.39 -0.02 -0.27 16 43 H 0.40 -3.22 9.12 -74.06 -0.68 -3.89 16 44 H 0.06 -0.03 7.80 -2.39 -0.02 -0.05 16 45 H 0.07 0.00 7.82 -2.39 -0.02 -0.02 16 46 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 47 H 0.08 -0.48 6.86 -2.39 -0.02 -0.50 16 48 H 0.16 -1.34 6.17 -2.91 -0.02 -1.36 16 49 H 0.15 -1.06 4.81 -2.91 -0.01 -1.07 16 Total: 0.00 -21.45 396.94 -1.20 -22.65 By element: Atomic # 1 Polarization: -15.19 SS G_CDS: -0.97 Total: -16.16 kcal Atomic # 6 Polarization: 5.10 SS G_CDS: 3.39 Total: 8.49 kcal Atomic # 7 Polarization: 0.39 SS G_CDS: -2.42 Total: -2.03 kcal Atomic # 8 Polarization: -8.92 SS G_CDS: -3.95 Total: -12.87 kcal Atomic # 9 Polarization: -0.34 SS G_CDS: 0.70 Total: 0.36 kcal Atomic # 14 Polarization: -2.50 SS G_CDS: 2.05 Total: -0.45 kcal Total: -21.45 -1.20 -22.65 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_12360594.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.507 kcal (2) G-P(sol) polarization free energy of solvation -21.453 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.960 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.201 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.654 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.161 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds