Wall clock time and date at job start Tue Mar 9 2021 13:49:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86306 * 109.47284 * 2 1 4 4 C 1.50700 * 109.47374 * 119.99944 * 2 1 3 5 5 C 1.38611 * 119.84615 * 195.25261 * 4 2 1 6 6 F 1.35099 * 119.91669 * 359.97438 * 5 4 2 7 7 C 1.38108 * 120.16716 * 180.21496 * 5 4 2 8 8 C 1.39619 * 119.85144 * 359.51234 * 7 5 4 9 9 C 1.47695 * 120.15760 * 180.27977 * 8 7 5 10 10 O 1.21567 * 119.99952 * 179.97438 * 9 8 7 11 11 N 1.34773 * 120.00042 * 359.97438 * 9 8 7 12 12 C 1.46500 * 120.00446 * 179.97438 * 11 9 8 13 13 C 1.52999 * 109.47439 * 180.02562 * 12 11 9 14 14 F 1.39893 * 109.47096 * 305.00537 * 13 12 11 15 15 C 1.53003 * 109.46708 * 65.00210 * 13 12 11 16 16 C 1.52999 * 109.47046 * 179.97438 * 15 13 12 17 17 C 1.53003 * 109.47073 * 300.00540 * 16 15 13 18 18 H 1.09002 * 109.47179 * 299.99528 * 17 16 15 19 19 C 1.52999 * 109.47073 * 180.02562 * 17 16 15 20 20 O 1.42903 * 109.47274 * 64.99743 * 19 17 16 21 21 C 1.52990 * 109.47424 * 59.99808 * 17 16 15 22 22 C 1.52993 * 109.47294 * 185.00196 * 13 12 11 23 23 C 1.39851 * 119.69027 * 0.25153 * 8 7 5 24 24 F 1.35100 * 120.08532 * 179.97438 * 23 8 7 25 25 C 1.38229 * 119.83839 * 15.00057 * 4 2 1 26 26 H 0.96700 * 114.00294 * 300.00176 * 1 2 3 27 27 H 1.08997 * 109.47274 * 240.00240 * 2 1 3 28 28 H 1.48503 * 109.99705 * 300.00252 * 3 2 1 29 29 H 1.48500 * 109.99763 * 61.31841 * 3 2 1 30 30 H 1.08002 * 120.07828 * 179.79490 * 7 5 4 31 31 H 0.97003 * 119.99677 * 0.02562 * 11 9 8 32 32 H 1.08994 * 109.46873 * 300.00988 * 12 11 9 33 33 H 1.09001 * 109.46542 * 60.00344 * 12 11 9 34 34 H 1.08995 * 109.47487 * 300.00067 * 15 13 12 35 35 H 1.09002 * 109.47075 * 60.00380 * 15 13 12 36 36 H 1.09000 * 109.47177 * 180.02562 * 16 15 13 37 37 H 1.08998 * 109.47253 * 59.99811 * 16 15 13 38 38 H 1.08998 * 109.47449 * 184.99912 * 19 17 16 39 39 H 1.08995 * 109.47114 * 304.99681 * 19 17 16 40 40 H 0.96701 * 113.99758 * 180.02562 * 20 19 17 41 41 H 1.09004 * 109.47378 * 180.02562 * 21 17 16 42 42 H 1.08996 * 109.47533 * 59.99956 * 21 17 16 43 43 H 1.09004 * 109.47066 * 300.00591 * 22 13 12 44 44 H 1.09000 * 109.47011 * 60.00310 * 22 13 12 45 45 H 1.07997 * 119.93286 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 3.2549 -0.5683 1.6169 6 9 4.0898 0.2056 0.8896 7 6 3.7234 -1.2199 2.7409 8 6 2.8581 -2.0152 3.4945 9 6 3.3505 -2.7101 4.7012 10 8 2.5944 -3.4015 5.3556 11 7 4.6380 -2.5776 5.0769 12 6 5.1263 -3.2664 6.2742 13 6 6.6098 -2.9504 6.4750 14 9 7.3179 -3.2794 5.3142 15 6 6.7780 -1.4584 6.7694 16 6 8.2614 -1.1425 6.9709 17 6 8.8016 -1.9586 8.1470 18 1 8.2495 -1.7022 9.0512 19 6 10.2848 -1.6422 8.3488 20 8 10.4315 -0.2751 8.7383 21 6 8.6333 -3.4504 7.8525 22 6 7.1505 -3.7664 7.6508 23 6 1.5227 -2.1503 3.1018 24 9 0.6785 -2.9183 3.8249 25 6 1.0687 -1.4964 1.9712 26 1 -0.3934 0.4417 0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 1.5614 2.4679 -1.2085 29 1 1.5879 2.4585 1.2242 30 1 4.7558 -1.1108 3.0389 31 1 5.2411 -2.0256 4.5550 32 1 4.5622 -2.9283 7.1433 33 1 4.9967 -4.3418 6.1528 34 1 6.3929 -0.8770 5.9318 35 1 6.2263 -1.2021 7.6739 36 1 8.3813 -0.0796 7.1811 37 1 8.8136 -1.3989 6.0668 38 1 10.6913 -2.2874 9.1276 39 1 10.8231 -1.8142 7.4169 40 1 11.3482 -0.0038 8.8836 41 1 9.0177 -4.0319 8.6906 42 1 9.1854 -3.7069 6.9484 43 1 6.5986 -3.5101 8.5552 44 1 7.0306 -4.8293 7.4410 45 1 0.0378 -1.5998 1.6665 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664722_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:49:51 Heat of formation + Delta-G solvation = -234.343729 kcal Electronic energy + Delta-G solvation = -32900.794625 eV Core-core repulsion = 27855.858550 eV Total energy + Delta-G solvation = -5044.936075 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.138 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -50.46863 -49.98766 -48.88829 -41.31836 -40.07253 -39.62715 -37.86668 -37.44798 -35.99413 -33.57730 -32.42437 -32.10809 -31.50491 -28.89353 -27.60626 -25.16145 -24.34941 -24.22159 -23.48820 -21.97473 -21.82116 -20.86722 -19.82989 -19.10228 -18.62571 -18.34706 -18.05675 -17.54144 -17.45583 -17.22122 -17.03714 -16.66785 -16.46836 -16.21742 -16.09737 -15.96798 -15.83092 -15.75597 -15.64382 -15.48594 -15.00808 -14.66481 -14.42772 -14.41090 -14.11295 -13.99974 -13.86736 -13.75009 -13.35609 -13.28949 -13.13985 -13.02319 -12.82255 -12.66384 -12.33587 -12.23094 -12.05492 -11.69052 -11.40544 -11.27036 -11.24345 -11.08523 -10.93842 -10.38566 -10.27472 -9.80673 -4.86461 -0.82804 -0.37098 1.02876 1.44837 1.53090 1.75725 1.86498 2.26797 2.66244 2.75581 2.96860 3.01051 3.06301 3.13285 3.24507 3.31882 3.38023 3.45071 3.46071 3.70974 3.80979 3.87876 4.05508 4.07467 4.13780 4.24937 4.25940 4.27413 4.30809 4.38813 4.46168 4.47459 4.50301 4.58929 4.65094 4.65984 4.68378 4.78952 4.80743 4.86205 4.96242 5.04506 5.13134 5.21508 5.32753 5.33423 6.13444 6.17457 6.60496 6.95346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.080 4.080 3 Si 0.682 3.318 4 C -0.090 4.090 5 C 0.080 3.920 6 F -0.100 7.100 7 C -0.082 4.082 8 C -0.151 4.151 9 C 0.562 3.438 10 O -0.513 6.513 11 N -0.721 5.721 12 C 0.101 3.899 13 C 0.112 3.888 14 F -0.200 7.200 15 C -0.140 4.140 16 C -0.112 4.112 17 C -0.090 4.090 18 H 0.080 0.920 19 C 0.079 3.921 20 O -0.574 6.574 21 C -0.115 4.115 22 C -0.135 4.135 23 C 0.163 3.837 24 F -0.105 7.105 25 C -0.130 4.130 26 H 0.379 0.621 27 H 0.135 0.865 28 H -0.246 1.246 29 H -0.254 1.254 30 H 0.153 0.847 31 H 0.403 0.597 32 H 0.091 0.909 33 H 0.085 0.915 34 H 0.074 0.926 35 H 0.085 0.915 36 H 0.078 0.922 37 H 0.068 0.932 38 H 0.046 0.954 39 H 0.047 0.953 40 H 0.381 0.619 41 H 0.074 0.926 42 H 0.073 0.927 43 H 0.087 0.913 44 H 0.082 0.918 45 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.761 1.861 0.763 6.102 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.188 4.188 3 Si 0.580 3.420 4 C -0.091 4.091 5 C 0.060 3.940 6 F -0.079 7.079 7 C -0.101 4.101 8 C -0.155 4.155 9 C 0.348 3.652 10 O -0.389 6.389 11 N -0.374 5.374 12 C -0.023 4.023 13 C 0.094 3.906 14 F -0.181 7.181 15 C -0.178 4.178 16 C -0.149 4.149 17 C -0.108 4.108 18 H 0.098 0.902 19 C 0.001 3.999 20 O -0.379 6.379 21 C -0.152 4.152 22 C -0.173 4.173 23 C 0.143 3.857 24 F -0.083 7.083 25 C -0.148 4.148 26 H 0.227 0.773 27 H 0.153 0.847 28 H -0.171 1.171 29 H -0.178 1.178 30 H 0.171 0.829 31 H 0.239 0.761 32 H 0.109 0.891 33 H 0.103 0.897 34 H 0.093 0.907 35 H 0.104 0.896 36 H 0.097 0.903 37 H 0.087 0.913 38 H 0.065 0.935 39 H 0.065 0.935 40 H 0.228 0.772 41 H 0.092 0.908 42 H 0.091 0.909 43 H 0.106 0.894 44 H 0.101 0.899 45 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 4.446 1.839 0.629 4.852 hybrid contribution -0.058 -0.142 0.250 0.293 sum 4.388 1.696 0.879 4.786 Atomic orbital electron populations 1.86620 1.16882 1.80123 1.49608 1.25093 0.84758 1.11618 0.97376 0.94547 0.92802 0.72894 0.81723 1.20469 0.92368 0.97934 0.98372 1.17075 0.87674 0.96400 0.92843 1.91205 1.69621 1.71124 1.75932 1.21109 1.00621 0.95216 0.93181 1.19807 0.93395 1.03539 0.98795 1.17789 0.82102 0.81228 0.84048 1.90899 1.55365 1.38633 1.54018 1.45703 1.10791 1.51734 1.29216 1.22017 0.92739 0.98904 0.88657 1.21209 0.89376 0.96760 0.83288 1.92868 1.80249 1.93948 1.51010 1.22169 0.98778 0.93326 1.03492 1.21513 0.94125 1.01051 0.98243 1.21188 0.95170 0.94916 0.99536 0.90156 1.22203 0.96403 0.82824 0.98437 1.86460 1.32465 1.27445 1.91571 1.21479 0.95678 0.95196 1.02854 1.22025 0.97207 1.00613 0.97467 1.17620 0.86634 0.91163 0.90330 1.91653 1.69172 1.71648 1.75826 1.20858 1.02469 0.97638 0.93858 0.77264 0.84724 1.17058 1.17788 0.82914 0.76053 0.89097 0.89712 0.90750 0.89590 0.90339 0.91318 0.93524 0.93502 0.77169 0.90768 0.90854 0.89446 0.89912 0.82089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.24 11.63 -35.23 -0.41 -0.17 16 2 C -0.08 0.11 2.97 36.01 0.11 0.22 16 3 Si 0.68 -0.81 29.54 -169.99 -5.02 -5.83 16 4 C -0.09 0.10 5.14 -104.49 -0.54 -0.44 16 5 C 0.08 -0.14 6.65 -39.49 -0.26 -0.40 16 6 F -0.10 0.25 13.67 2.25 0.03 0.28 16 7 C -0.08 0.16 9.52 -39.11 -0.37 -0.21 16 8 C -0.15 -0.09 5.88 -104.92 -0.62 -0.71 16 9 C 0.56 1.18 7.77 -12.40 -0.10 1.08 16 10 O -0.51 -3.12 15.34 5.31 0.08 -3.03 16 11 N -0.72 0.56 5.12 -61.30 -0.31 0.24 16 12 C 0.10 -0.11 4.85 -4.04 -0.02 -0.13 16 13 C 0.11 -0.22 0.84 -90.62 -0.08 -0.30 16 14 F -0.20 0.02 15.42 2.25 0.03 0.05 16 15 C -0.14 0.35 4.87 -26.73 -0.13 0.22 16 16 C -0.11 0.17 4.98 -26.73 -0.13 0.04 16 17 C -0.09 0.15 2.43 -90.62 -0.22 -0.07 16 18 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 19 C 0.08 -0.12 6.43 37.16 0.24 0.12 16 20 O -0.57 0.21 13.19 -35.23 -0.46 -0.26 16 21 C -0.11 0.27 5.08 -26.76 -0.14 0.13 16 22 C -0.14 0.35 4.99 -26.76 -0.13 0.22 16 23 C 0.16 0.25 7.28 -38.96 -0.28 -0.03 16 24 F -0.11 -0.44 15.55 2.25 0.04 -0.41 16 25 C -0.13 0.05 9.20 -39.57 -0.36 -0.31 16 26 H 0.38 -1.31 8.42 45.56 0.38 -0.93 16 27 H 0.14 -0.30 7.96 -51.93 -0.41 -0.71 16 28 H -0.25 -0.42 7.11 56.52 0.40 -0.01 16 29 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 30 H 0.15 -0.72 6.40 -52.49 -0.34 -1.06 16 31 H 0.40 -1.18 5.49 -40.82 -0.22 -1.40 16 32 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 33 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.07 -0.23 7.18 -51.93 -0.37 -0.61 16 35 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 36 H 0.08 -0.04 7.82 -51.93 -0.41 -0.44 16 37 H 0.07 -0.06 7.80 -51.93 -0.41 -0.47 16 38 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 39 H 0.05 -0.09 8.14 -51.93 -0.42 -0.52 16 40 H 0.38 -1.62 9.12 45.56 0.42 -1.20 16 41 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 42 H 0.07 -0.12 7.80 -51.93 -0.41 -0.53 16 43 H 0.09 -0.30 8.14 -51.93 -0.42 -0.73 16 44 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 45 H 0.16 -0.23 7.06 -52.49 -0.37 -0.60 16 LS Contribution 370.90 15.07 5.59 5.59 Total: 0.00 -8.49 370.90 -8.61 -17.11 By element: Atomic # 1 Polarization: -7.86 SS G_CDS: -5.14 Total: -13.00 kcal Atomic # 6 Polarization: 2.47 SS G_CDS: -3.04 Total: -0.57 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -0.31 Total: 0.24 kcal Atomic # 8 Polarization: -2.67 SS G_CDS: -0.79 Total: -3.46 kcal Atomic # 9 Polarization: -0.18 SS G_CDS: 0.10 Total: -0.08 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.02 Total: -5.83 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -8.49 -8.61 -17.11 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -217.238 kcal (2) G-P(sol) polarization free energy of solvation -8.494 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -225.732 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.612 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.106 kcal (6) G-S(sol) free energy of system = (1) + (5) -234.344 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds