Wall clock time and date at job start Tue Mar 9 2021 13:49:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86306 * 109.47284 * 2 1 4 4 C 1.50700 * 109.47374 * 119.99944 * 2 1 3 5 5 C 1.38611 * 119.84615 * 195.25261 * 4 2 1 6 6 F 1.35099 * 119.91669 * 359.97438 * 5 4 2 7 7 C 1.38108 * 120.16716 * 180.21496 * 5 4 2 8 8 C 1.39619 * 119.85144 * 359.51234 * 7 5 4 9 9 C 1.47695 * 120.15760 * 180.27977 * 8 7 5 10 10 O 1.21567 * 119.99952 * 179.97438 * 9 8 7 11 11 N 1.34773 * 120.00042 * 359.97438 * 9 8 7 12 12 C 1.46500 * 120.00446 * 179.97438 * 11 9 8 13 13 C 1.52999 * 109.47439 * 180.02562 * 12 11 9 14 14 F 1.39893 * 109.47096 * 305.00537 * 13 12 11 15 15 C 1.53003 * 109.46708 * 65.00210 * 13 12 11 16 16 C 1.52999 * 109.47046 * 179.97438 * 15 13 12 17 17 C 1.53003 * 109.47073 * 300.00540 * 16 15 13 18 18 H 1.09002 * 109.47179 * 299.99528 * 17 16 15 19 19 C 1.52999 * 109.47073 * 180.02562 * 17 16 15 20 20 O 1.42903 * 109.47274 * 64.99743 * 19 17 16 21 21 C 1.52990 * 109.47424 * 59.99808 * 17 16 15 22 22 C 1.52993 * 109.47294 * 185.00196 * 13 12 11 23 23 C 1.39851 * 119.69027 * 0.25153 * 8 7 5 24 24 F 1.35100 * 120.08532 * 179.97438 * 23 8 7 25 25 C 1.38229 * 119.83839 * 15.00057 * 4 2 1 26 26 H 0.96700 * 114.00294 * 300.00176 * 1 2 3 27 27 H 1.08997 * 109.47274 * 240.00240 * 2 1 3 28 28 H 1.48503 * 109.99705 * 300.00252 * 3 2 1 29 29 H 1.48500 * 109.99763 * 61.31841 * 3 2 1 30 30 H 1.08002 * 120.07828 * 179.79490 * 7 5 4 31 31 H 0.97003 * 119.99677 * 0.02562 * 11 9 8 32 32 H 1.08994 * 109.46873 * 300.00988 * 12 11 9 33 33 H 1.09001 * 109.46542 * 60.00344 * 12 11 9 34 34 H 1.08995 * 109.47487 * 300.00067 * 15 13 12 35 35 H 1.09002 * 109.47075 * 60.00380 * 15 13 12 36 36 H 1.09000 * 109.47177 * 180.02562 * 16 15 13 37 37 H 1.08998 * 109.47253 * 59.99811 * 16 15 13 38 38 H 1.08998 * 109.47449 * 184.99912 * 19 17 16 39 39 H 1.08995 * 109.47114 * 304.99681 * 19 17 16 40 40 H 0.96701 * 113.99758 * 180.02562 * 20 19 17 41 41 H 1.09004 * 109.47378 * 180.02562 * 21 17 16 42 42 H 1.08996 * 109.47533 * 59.99956 * 21 17 16 43 43 H 1.09004 * 109.47066 * 300.00591 * 22 13 12 44 44 H 1.09000 * 109.47011 * 60.00310 * 22 13 12 45 45 H 1.07997 * 119.93286 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 3.2549 -0.5683 1.6169 6 9 4.0898 0.2056 0.8896 7 6 3.7234 -1.2199 2.7409 8 6 2.8581 -2.0152 3.4945 9 6 3.3505 -2.7101 4.7012 10 8 2.5944 -3.4015 5.3556 11 7 4.6380 -2.5776 5.0769 12 6 5.1263 -3.2664 6.2742 13 6 6.6098 -2.9504 6.4750 14 9 7.3179 -3.2794 5.3142 15 6 6.7780 -1.4584 6.7694 16 6 8.2614 -1.1425 6.9709 17 6 8.8016 -1.9586 8.1470 18 1 8.2495 -1.7022 9.0512 19 6 10.2848 -1.6422 8.3488 20 8 10.4315 -0.2751 8.7383 21 6 8.6333 -3.4504 7.8525 22 6 7.1505 -3.7664 7.6508 23 6 1.5227 -2.1503 3.1018 24 9 0.6785 -2.9183 3.8249 25 6 1.0687 -1.4964 1.9712 26 1 -0.3934 0.4417 0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 1.5614 2.4679 -1.2085 29 1 1.5879 2.4585 1.2242 30 1 4.7558 -1.1108 3.0389 31 1 5.2411 -2.0256 4.5550 32 1 4.5622 -2.9283 7.1433 33 1 4.9967 -4.3418 6.1528 34 1 6.3929 -0.8770 5.9318 35 1 6.2263 -1.2021 7.6739 36 1 8.3813 -0.0796 7.1811 37 1 8.8136 -1.3989 6.0668 38 1 10.6913 -2.2874 9.1276 39 1 10.8231 -1.8142 7.4169 40 1 11.3482 -0.0038 8.8836 41 1 9.0177 -4.0319 8.6906 42 1 9.1854 -3.7069 6.9484 43 1 6.5986 -3.5101 8.5552 44 1 7.0306 -4.8293 7.4410 45 1 0.0378 -1.5998 1.6665 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664722_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:49:50 Heat of formation + Delta-G solvation = -234.640645 kcal Electronic energy + Delta-G solvation = -32900.807500 eV Core-core repulsion = 27855.858550 eV Total energy + Delta-G solvation = -5044.948950 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.138 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -50.32692 -50.13643 -48.82039 -41.37411 -40.04577 -39.51931 -37.81400 -37.36946 -36.02945 -33.53993 -32.33380 -31.93520 -31.45756 -28.83150 -27.53189 -25.06268 -24.26496 -24.09554 -23.43542 -21.86098 -21.84512 -20.72403 -19.79661 -19.07459 -18.61462 -18.23183 -18.02134 -17.51575 -17.41346 -17.16698 -16.98777 -16.69590 -16.40263 -16.16025 -16.06741 -15.96072 -15.74940 -15.72723 -15.56532 -15.38182 -14.95588 -14.59473 -14.44464 -14.26169 -14.11598 -13.93734 -13.85756 -13.65698 -13.28442 -13.17473 -13.00878 -12.97303 -12.70305 -12.64533 -12.22407 -12.09709 -12.05623 -11.54642 -11.42977 -11.19354 -11.12637 -11.08207 -10.79556 -10.42579 -10.22296 -9.77579 -4.80401 -0.81433 -0.30352 1.08555 1.43227 1.55371 1.75359 1.89215 2.25085 2.73744 2.80056 3.07829 3.12707 3.16861 3.29090 3.38908 3.43016 3.49972 3.56346 3.60257 3.78928 3.95258 4.03704 4.19744 4.22946 4.30194 4.33585 4.40716 4.40841 4.44748 4.52075 4.57591 4.62624 4.64975 4.67315 4.71806 4.73711 4.84526 4.95491 5.01145 5.01198 5.09442 5.14102 5.25164 5.35436 5.37933 5.47756 6.18800 6.34585 6.89341 6.89579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.080 4.080 3 Si 0.746 3.254 4 C -0.088 4.088 5 C 0.086 3.914 6 F -0.091 7.091 7 C -0.068 4.068 8 C -0.159 4.159 9 C 0.560 3.440 10 O -0.562 6.562 11 N -0.706 5.706 12 C 0.100 3.900 13 C 0.119 3.881 14 F -0.210 7.210 15 C -0.138 4.138 16 C -0.108 4.108 17 C -0.090 4.090 18 H 0.075 0.925 19 C 0.076 3.924 20 O -0.594 6.594 21 C -0.110 4.110 22 C -0.137 4.137 23 C 0.138 3.862 24 F -0.128 7.128 25 C -0.126 4.126 26 H 0.391 0.609 27 H 0.148 0.852 28 H -0.288 1.288 29 H -0.282 1.282 30 H 0.183 0.817 31 H 0.415 0.585 32 H 0.094 0.906 33 H 0.075 0.925 34 H 0.083 0.917 35 H 0.091 0.909 36 H 0.068 0.932 37 H 0.063 0.937 38 H 0.054 0.946 39 H 0.050 0.950 40 H 0.395 0.605 41 H 0.081 0.919 42 H 0.066 0.934 43 H 0.097 0.903 44 H 0.083 0.917 45 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.972 2.302 0.399 7.353 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.188 4.188 3 Si 0.649 3.351 4 C -0.089 4.089 5 C 0.067 3.933 6 F -0.069 7.069 7 C -0.087 4.087 8 C -0.163 4.163 9 C 0.347 3.653 10 O -0.441 6.441 11 N -0.359 5.359 12 C -0.024 4.024 13 C 0.100 3.900 14 F -0.191 7.191 15 C -0.176 4.176 16 C -0.145 4.145 17 C -0.109 4.109 18 H 0.093 0.907 19 C -0.001 4.001 20 O -0.403 6.403 21 C -0.148 4.148 22 C -0.175 4.175 23 C 0.117 3.883 24 F -0.106 7.106 25 C -0.144 4.144 26 H 0.241 0.759 27 H 0.165 0.835 28 H -0.215 1.215 29 H -0.208 1.208 30 H 0.200 0.800 31 H 0.254 0.746 32 H 0.112 0.888 33 H 0.093 0.907 34 H 0.102 0.898 35 H 0.110 0.890 36 H 0.086 0.914 37 H 0.082 0.918 38 H 0.072 0.928 39 H 0.068 0.932 40 H 0.245 0.755 41 H 0.100 0.900 42 H 0.085 0.915 43 H 0.116 0.884 44 H 0.102 0.898 45 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges 5.713 2.292 0.266 6.161 hybrid contribution -0.407 -0.196 0.327 0.558 sum 5.306 2.096 0.593 5.735 Atomic orbital electron populations 1.86593 1.17370 1.80400 1.50569 1.25181 0.84433 1.11438 0.97777 0.93916 0.91747 0.71572 0.77892 1.20520 0.92606 0.97596 0.98213 1.17065 0.87482 0.96038 0.92730 1.91233 1.69258 1.70742 1.75661 1.21320 1.01490 0.93638 0.92276 1.19769 0.93443 1.04328 0.98802 1.18044 0.82434 0.80687 0.84096 1.90872 1.56692 1.40903 1.55632 1.45626 1.10078 1.51092 1.29137 1.22056 0.93400 0.98366 0.88596 1.21203 0.88462 0.97232 0.83070 1.92850 1.80438 1.94078 1.51687 1.22173 0.98273 0.92936 1.04198 1.21450 0.94662 1.00398 0.98037 1.21195 0.95178 0.95302 0.99185 0.90690 1.22271 0.96514 0.82518 0.98828 1.86418 1.34079 1.28087 1.91667 1.21439 0.95700 0.94801 1.02831 1.22066 0.97205 1.00608 0.97606 1.17937 0.87036 0.92114 0.91193 1.91589 1.69936 1.72541 1.76567 1.20875 1.02966 0.97360 0.93212 0.75921 0.83488 1.21485 1.20812 0.79954 0.74650 0.88803 0.90685 0.89807 0.89031 0.91354 0.91843 0.92818 0.93195 0.75512 0.90002 0.91496 0.88407 0.89811 0.81454 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.73 11.63 -148.98 -1.73 -1.00 16 2 C -0.08 0.29 2.97 71.24 0.21 0.50 16 3 Si 0.75 -2.06 29.54 68.60 2.03 -0.03 16 4 C -0.09 0.27 5.14 -19.78 -0.10 0.17 16 5 C 0.09 -0.43 6.65 22.33 0.15 -0.28 16 6 F -0.09 0.64 13.67 44.97 0.61 1.25 16 7 C -0.07 0.36 9.52 22.57 0.21 0.58 16 8 C -0.16 -0.22 5.88 -20.05 -0.12 -0.34 16 9 C 0.56 2.75 7.77 86.74 0.67 3.42 16 10 O -0.56 -7.85 15.34 -3.93 -0.06 -7.91 16 11 N -0.71 1.24 5.12 -466.13 -2.39 -1.15 16 12 C 0.10 -0.20 4.85 86.38 0.42 0.22 16 13 C 0.12 -0.52 0.84 -10.80 -0.01 -0.53 16 14 F -0.21 0.15 15.42 44.97 0.69 0.84 16 15 C -0.14 0.78 4.87 30.60 0.15 0.93 16 16 C -0.11 0.36 4.98 30.59 0.15 0.51 16 17 C -0.09 0.32 2.43 -10.80 -0.03 0.29 16 18 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 19 C 0.08 -0.25 6.43 71.98 0.46 0.21 16 20 O -0.59 0.48 13.19 -148.98 -1.97 -1.48 16 21 C -0.11 0.56 5.08 30.57 0.16 0.72 16 22 C -0.14 0.76 4.99 30.58 0.15 0.92 16 23 C 0.14 0.57 7.28 22.67 0.17 0.73 16 24 F -0.13 -1.36 15.55 44.97 0.70 -0.66 16 25 C -0.13 0.07 9.20 22.28 0.20 0.28 16 26 H 0.39 -2.77 8.42 -74.06 -0.62 -3.40 16 27 H 0.15 -0.87 7.96 -2.39 -0.02 -0.89 16 28 H -0.29 -1.20 7.11 99.48 0.71 -0.50 16 29 H -0.28 -0.54 7.11 99.48 0.71 0.16 16 30 H 0.18 -2.19 6.40 -2.91 -0.02 -2.21 16 31 H 0.41 -2.92 5.49 -92.71 -0.51 -3.43 16 32 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 33 H 0.07 0.03 8.14 -2.39 -0.02 0.01 16 34 H 0.08 -0.63 7.18 -2.39 -0.02 -0.65 16 35 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 36 H 0.07 -0.07 7.82 -2.39 -0.02 -0.09 16 37 H 0.06 -0.14 7.80 -2.39 -0.02 -0.15 16 38 H 0.05 -0.27 8.14 -2.39 -0.02 -0.29 16 39 H 0.05 -0.21 8.14 -2.39 -0.02 -0.23 16 40 H 0.40 -3.39 9.12 -74.06 -0.68 -4.07 16 41 H 0.08 -0.53 8.14 -2.38 -0.02 -0.55 16 42 H 0.07 -0.24 7.80 -2.39 -0.02 -0.25 16 43 H 0.10 -0.74 8.14 -2.38 -0.02 -0.76 16 44 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 45 H 0.17 -0.41 7.06 -2.91 -0.02 -0.43 16 Total: 0.00 -21.07 370.90 0.04 -21.03 By element: Atomic # 1 Polarization: -18.53 SS G_CDS: -0.70 Total: -19.23 kcal Atomic # 6 Polarization: 5.48 SS G_CDS: 2.85 Total: 8.33 kcal Atomic # 7 Polarization: 1.24 SS G_CDS: -2.39 Total: -1.15 kcal Atomic # 8 Polarization: -6.64 SS G_CDS: -3.76 Total: -10.40 kcal Atomic # 9 Polarization: -0.57 SS G_CDS: 2.01 Total: 1.44 kcal Atomic # 14 Polarization: -2.06 SS G_CDS: 2.03 Total: -0.03 kcal Total: -21.07 0.04 -21.03 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -213.610 kcal (2) G-P(sol) polarization free energy of solvation -21.072 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -234.682 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.041 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.031 kcal (6) G-S(sol) free energy of system = (1) + (5) -234.641 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds