Wall clock time and date at job start Tue Mar 9 2021 13:49:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86303 * 109.46817 * 2 1 4 4 C 1.50693 * 109.47291 * 119.99913 * 2 1 3 5 5 C 1.37812 * 119.94054 * 15.00249 * 4 2 1 6 6 C 1.39680 * 119.87761 * 179.97438 * 5 4 2 7 7 C 1.47728 * 120.11440 * 180.02562 * 6 5 4 8 8 O 1.21575 * 120.00090 * 0.02562 * 7 6 5 9 9 N 1.34771 * 119.99658 * 179.97438 * 7 6 5 10 10 C 1.46503 * 120.00040 * 179.97438 * 9 7 6 11 11 C 1.52997 * 109.47269 * 179.97438 * 10 9 7 12 12 F 1.39897 * 109.47422 * 304.99988 * 11 10 9 13 13 C 1.52999 * 109.46991 * 65.00478 * 11 10 9 14 14 C 1.52997 * 109.46991 * 180.02562 * 13 11 10 15 15 C 1.52996 * 109.47131 * 299.99311 * 14 13 11 16 16 H 1.08996 * 109.47452 * 300.00000 * 15 14 13 17 17 C 1.52997 * 109.47131 * 179.97438 * 15 14 13 18 18 O 1.42906 * 109.47361 * 65.00361 * 17 15 14 19 19 C 1.53002 * 109.46972 * 60.00459 * 15 14 13 20 20 C 1.52997 * 109.46817 * 299.99733 * 19 15 14 21 21 C 1.39627 * 119.76707 * 0.27363 * 6 5 4 22 22 C 1.37868 * 119.87403 * 359.45131 * 21 6 5 23 23 C 1.38628 * 120.11976 * 0.56783 * 22 21 6 24 24 F 1.35100 * 119.87811 * 179.69847 * 23 22 21 25 25 H 0.96702 * 113.99875 * 299.99810 * 1 2 3 26 26 H 1.08999 * 109.46994 * 240.00333 * 2 1 3 27 27 H 1.48504 * 110.00144 * 178.68169 * 3 2 1 28 28 H 1.48500 * 110.00397 * 300.00225 * 3 2 1 29 29 H 1.07996 * 120.06593 * 359.97438 * 5 4 2 30 30 H 0.97002 * 120.00454 * 0.02562 * 9 7 6 31 31 H 1.09002 * 109.46913 * 59.99937 * 10 9 7 32 32 H 1.09001 * 109.46815 * 300.00514 * 10 9 7 33 33 H 1.09002 * 109.46719 * 299.99711 * 13 11 10 34 34 H 1.08993 * 109.47839 * 59.99553 * 13 11 10 35 35 H 1.09001 * 109.47289 * 179.97438 * 14 13 11 36 36 H 1.09000 * 109.47611 * 59.99933 * 14 13 11 37 37 H 1.09000 * 109.47325 * 185.00280 * 17 15 14 38 38 H 1.09006 * 109.47500 * 305.00368 * 17 15 14 39 39 H 0.96700 * 114.00146 * 180.02562 * 18 17 15 40 40 H 1.09002 * 109.47070 * 179.97438 * 19 15 14 41 41 H 1.08996 * 109.47407 * 59.99513 * 19 15 14 42 42 H 1.09001 * 109.47502 * 300.00518 * 20 19 15 43 43 H 1.09001 * 109.47289 * 180.02562 * 20 19 15 44 44 H 1.07996 * 120.06094 * 179.70809 * 21 6 5 45 45 H 1.07999 * 119.93408 * 180.25471 * 22 21 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 1.0731 -1.4946 1.9705 6 6 1.5403 -2.1528 3.1104 7 6 0.6250 -2.9952 3.9072 8 8 -0.5370 -3.1169 3.5709 9 7 1.0784 -3.6297 5.0064 10 6 0.1706 -4.4647 5.7970 11 6 0.9311 -5.0654 6.9809 12 9 2.0557 -5.7530 6.5124 13 6 1.3746 -3.9449 7.9236 14 6 2.1356 -4.5455 9.1072 15 6 1.2232 -5.5150 9.8612 16 1 0.3470 -4.9795 10.2267 17 6 1.9845 -6.1161 11.0444 18 8 2.2979 -5.0848 11.9827 19 6 0.7797 -6.6355 8.9185 20 6 0.0187 -6.0349 7.7350 21 6 2.8741 -2.0077 3.4970 22 6 3.7254 -1.2253 2.7462 23 6 3.2565 -0.5739 1.6159 24 9 4.0935 0.1965 0.8871 25 1 -0.3933 0.4417 0.7651 26 1 1.7923 -0.5138 -0.8900 27 1 3.5345 1.7705 0.0321 28 1 1.5613 2.4680 -1.2084 29 1 0.0413 -1.6000 1.6697 30 1 2.0056 -3.5330 5.2746 31 1 -0.2213 -5.2674 5.1724 32 1 -0.6546 -3.8556 6.1660 33 1 2.0250 -3.2544 7.3866 34 1 0.4985 -3.4091 8.2888 35 1 2.4520 -3.7472 9.7786 36 1 3.0119 -5.0809 8.7418 37 1 1.3658 -6.8718 11.5284 38 1 2.9066 -6.5753 10.6878 39 1 2.7822 -5.3944 12.7603 40 1 0.1301 -7.3265 9.4558 41 1 1.6559 -7.1710 8.5530 42 1 -0.8575 -5.4993 8.1004 43 1 -0.2977 -6.8332 7.0636 44 1 3.2391 -2.5107 4.3802 45 1 4.7583 -1.1156 3.0420 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664722_12496548.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:49:57 Heat of formation + Delta-G solvation = -185.433307 kcal Electronic energy + Delta-G solvation = -30129.540368 eV Core-core repulsion = 25556.179183 eV Total energy + Delta-G solvation = -4573.361185 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.148 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -50.39122 -48.87516 -41.39120 -39.91798 -39.51474 -37.72758 -37.44171 -35.95894 -33.29369 -32.48368 -32.11046 -31.85430 -28.55965 -27.10565 -25.51785 -24.46725 -23.89144 -23.30526 -21.95346 -21.48752 -20.83717 -19.49945 -18.83864 -18.35536 -18.21787 -17.74583 -17.37621 -17.13690 -17.02130 -16.53063 -16.31585 -16.13172 -15.94455 -15.78594 -15.70281 -15.52268 -15.20000 -14.87261 -14.68771 -14.63386 -14.40904 -14.05986 -14.02758 -13.78145 -13.64018 -13.38086 -13.28744 -13.12554 -12.84324 -12.76961 -12.36965 -12.31499 -12.22444 -11.69012 -11.39512 -11.34262 -11.24360 -11.07024 -10.94314 -10.91365 -10.30805 -10.10213 -9.74202 -5.03022 -0.54085 -0.05109 1.21339 1.61381 1.65747 1.89022 2.01437 2.56037 2.94107 3.01741 3.13964 3.18547 3.25939 3.30154 3.38600 3.46113 3.51529 3.60983 3.80341 3.85454 3.88690 4.04167 4.06945 4.14229 4.25705 4.27802 4.33306 4.38761 4.46217 4.47619 4.49249 4.57327 4.68627 4.71268 4.79341 4.79689 4.81388 4.86909 4.96443 4.97750 5.01387 5.06791 5.18686 5.21508 5.33085 5.53544 6.28010 6.43139 6.60141 7.05393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.066 4.066 3 Si 0.682 3.318 4 C -0.155 4.155 5 C -0.019 4.019 6 C -0.142 4.142 7 C 0.563 3.437 8 O -0.528 6.528 9 N -0.723 5.723 10 C 0.101 3.899 11 C 0.112 3.888 12 F -0.201 7.201 13 C -0.139 4.139 14 C -0.112 4.112 15 C -0.089 4.089 16 H 0.080 0.920 17 C 0.079 3.921 18 O -0.574 6.574 19 C -0.115 4.115 20 C -0.135 4.135 21 C -0.059 4.059 22 C -0.151 4.151 23 C 0.119 3.881 24 F -0.121 7.121 25 H 0.381 0.619 26 H 0.123 0.877 27 H -0.228 1.228 28 H -0.258 1.258 29 H 0.156 0.844 30 H 0.403 0.597 31 H 0.083 0.917 32 H 0.090 0.910 33 H 0.074 0.926 34 H 0.086 0.914 35 H 0.078 0.922 36 H 0.067 0.933 37 H 0.047 0.953 38 H 0.046 0.954 39 H 0.381 0.619 40 H 0.074 0.926 41 H 0.072 0.928 42 H 0.087 0.913 43 H 0.082 0.918 44 H 0.137 0.863 45 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.630 -0.508 6.209 6.439 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.582 3.418 4 C -0.156 4.156 5 C -0.038 4.038 6 C -0.145 4.145 7 C 0.350 3.650 8 O -0.405 6.405 9 N -0.377 5.377 10 C -0.023 4.023 11 C 0.093 3.907 12 F -0.182 7.182 13 C -0.177 4.177 14 C -0.149 4.149 15 C -0.108 4.108 16 H 0.099 0.901 17 C 0.001 3.999 18 O -0.379 6.379 19 C -0.152 4.152 20 C -0.173 4.173 21 C -0.078 4.078 22 C -0.170 4.170 23 C 0.099 3.901 24 F -0.099 7.099 25 H 0.229 0.771 26 H 0.140 0.860 27 H -0.152 1.152 28 H -0.183 1.183 29 H 0.174 0.826 30 H 0.239 0.761 31 H 0.101 0.899 32 H 0.108 0.892 33 H 0.092 0.908 34 H 0.104 0.896 35 H 0.096 0.904 36 H 0.086 0.914 37 H 0.065 0.935 38 H 0.065 0.935 39 H 0.228 0.772 40 H 0.092 0.908 41 H 0.091 0.909 42 H 0.106 0.894 43 H 0.101 0.899 44 H 0.154 0.846 45 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 1.102 0.047 4.510 4.643 hybrid contribution 1.126 -1.045 0.233 1.553 sum 2.227 -0.998 4.743 5.334 Atomic orbital electron populations 1.86521 1.16591 1.81447 1.49503 1.25012 0.85630 1.10312 0.96601 0.95254 0.81752 0.76474 0.88334 1.20367 0.92755 1.02286 1.00207 1.20966 1.00973 0.90859 0.90972 1.19931 0.94192 1.02147 0.98219 1.18096 0.87363 0.79374 0.80141 1.90831 1.17639 1.62747 1.69265 1.45750 1.14497 1.49800 1.27614 1.21991 0.92977 0.95399 0.91981 1.21215 0.83815 0.92383 0.93247 1.92866 1.54016 1.81377 1.89891 1.22160 1.02137 0.96784 0.96626 1.21511 0.98108 0.99323 0.96000 1.21187 0.98963 0.96686 0.93950 0.90126 1.22209 0.98262 0.89570 0.89833 1.86460 1.79332 1.36831 1.35322 1.21490 1.00836 0.97513 0.95385 1.22035 0.98399 0.99088 0.97789 1.21178 0.91922 0.96018 0.98646 1.21096 1.01731 0.99220 0.94924 1.17774 0.87597 0.93100 0.91604 1.91583 1.71042 1.71475 1.75812 0.77065 0.85966 1.15222 1.18328 0.82607 0.76097 0.89867 0.89164 0.90768 0.89573 0.90366 0.91388 0.93516 0.93529 0.77176 0.90777 0.90895 0.89437 0.89943 0.84550 0.83547 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.19 11.64 -35.23 -0.41 -0.60 16 2 C -0.07 -0.01 2.96 36.00 0.11 0.10 16 3 Si 0.68 -0.26 30.81 -169.99 -5.24 -5.50 16 4 C -0.15 -0.03 5.13 -104.62 -0.54 -0.57 16 5 C -0.02 -0.01 8.78 -39.20 -0.34 -0.36 16 6 C -0.14 -0.03 5.87 -104.96 -0.62 -0.65 16 7 C 0.56 0.90 7.77 -12.38 -0.10 0.81 16 8 O -0.53 -2.73 16.34 5.30 0.09 -2.65 16 9 N -0.72 0.61 5.12 -61.29 -0.31 0.30 16 10 C 0.10 -0.11 4.85 -4.04 -0.02 -0.13 16 11 C 0.11 -0.22 0.84 -90.62 -0.08 -0.29 16 12 F -0.20 -0.02 15.42 2.25 0.03 0.01 16 13 C -0.14 0.34 4.87 -26.73 -0.13 0.21 16 14 C -0.11 0.16 4.98 -26.73 -0.13 0.03 16 15 C -0.09 0.15 2.43 -90.62 -0.22 -0.07 16 16 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 17 C 0.08 -0.12 6.43 37.16 0.24 0.12 16 18 O -0.57 0.20 13.20 -35.23 -0.46 -0.27 16 19 C -0.11 0.26 5.08 -26.73 -0.14 0.13 16 20 C -0.14 0.35 5.00 -26.73 -0.13 0.21 16 21 C -0.06 0.11 9.54 -39.20 -0.37 -0.27 16 22 C -0.15 0.21 10.01 -39.57 -0.40 -0.19 16 23 C 0.12 0.03 6.67 -39.27 -0.26 -0.23 16 24 F -0.12 -0.19 12.81 2.25 0.03 -0.16 16 25 H 0.38 -1.34 8.43 45.56 0.38 -0.96 16 26 H 0.12 0.08 7.96 -51.93 -0.41 -0.34 16 27 H -0.23 -0.42 5.27 56.52 0.30 -0.12 16 28 H -0.26 -0.73 7.11 56.52 0.40 -0.33 16 29 H 0.16 0.17 6.66 -52.49 -0.35 -0.18 16 30 H 0.40 -1.11 5.48 -40.82 -0.22 -1.33 16 31 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 32 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 33 H 0.07 -0.23 7.18 -51.93 -0.37 -0.60 16 34 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 35 H 0.08 -0.04 7.82 -51.93 -0.41 -0.44 16 36 H 0.07 -0.06 7.80 -51.93 -0.41 -0.46 16 37 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 39 H 0.38 -1.61 9.12 45.56 0.42 -1.19 16 40 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.07 -0.11 7.80 -51.93 -0.41 -0.52 16 42 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 43 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 44 H 0.14 -0.61 6.40 -52.49 -0.34 -0.94 16 45 H 0.15 -0.47 8.06 -52.49 -0.42 -0.90 16 LS Contribution 364.92 15.07 5.50 5.50 Total: 0.00 -8.49 364.92 -9.55 -18.04 By element: Atomic # 1 Polarization: -7.88 SS G_CDS: -5.64 Total: -13.52 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -3.13 Total: -1.15 kcal Atomic # 7 Polarization: 0.61 SS G_CDS: -0.31 Total: 0.30 kcal Atomic # 8 Polarization: -2.73 SS G_CDS: -0.79 Total: -3.52 kcal Atomic # 9 Polarization: -0.21 SS G_CDS: 0.06 Total: -0.15 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: -5.24 Total: -5.50 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -8.49 -9.55 -18.04 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_12496548.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -167.396 kcal (2) G-P(sol) polarization free energy of solvation -8.490 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -175.886 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.547 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.037 kcal (6) G-S(sol) free energy of system = (1) + (5) -185.433 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds