Wall clock time and date at job start Tue Mar 9 2021 13:50:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38975 * 119.95399 * 2 1 4 4 O 1.35710 * 119.91423 * 359.97438 * 3 2 1 5 5 C 1.39021 * 120.17485 * 180.02562 * 3 2 1 6 6 C 1.50700 * 119.95687 * 179.97438 * 5 3 2 7 7 O 1.42907 * 109.46821 * 74.99665 * 6 5 3 8 8 Si 1.86299 * 109.47354 * 194.99780 * 6 5 3 9 9 C 1.37681 * 120.08668 * 359.74078 * 5 3 2 10 10 C 1.39747 * 119.91206 * 0.53468 * 9 5 3 11 11 C 1.47600 * 120.09097 * 179.74574 * 10 9 5 12 12 O 1.21591 * 119.99529 * 359.72160 * 11 10 9 13 13 N 1.34770 * 120.00514 * 179.72399 * 11 10 9 14 14 C 1.46497 * 120.00569 * 180.02562 * 13 11 10 15 15 C 1.53000 * 109.47676 * 179.97438 * 14 13 11 16 16 F 1.39897 * 109.47108 * 305.00434 * 15 14 13 17 17 C 1.53006 * 109.46846 * 64.99596 * 15 14 13 18 18 C 1.53000 * 109.46846 * 180.02562 * 17 15 14 19 19 C 1.52993 * 109.47345 * 300.00008 * 18 17 15 20 20 H 1.09002 * 109.47493 * 300.00298 * 19 18 17 21 21 C 1.53000 * 109.47345 * 180.02562 * 19 18 17 22 22 O 1.42903 * 109.46726 * 65.00082 * 21 19 18 23 23 C 1.53006 * 109.47155 * 60.00181 * 19 18 17 24 24 C 1.52993 * 109.47345 * 184.99604 * 15 14 13 25 25 C 1.37716 * 119.95773 * 180.02562 * 2 1 3 26 26 H 1.09004 * 109.46918 * 269.97739 * 1 2 3 27 27 H 1.08999 * 109.47082 * 29.97745 * 1 2 3 28 28 H 1.09000 * 109.46904 * 149.97652 * 1 2 3 29 29 H 0.96703 * 114.00160 * 90.00291 * 4 3 2 30 30 H 1.09004 * 109.47147 * 315.00126 * 6 5 3 31 31 H 0.96698 * 113.99684 * 180.02562 * 7 6 5 32 32 H 1.48498 * 109.99758 * 178.68026 * 8 6 5 33 33 H 1.48499 * 109.99985 * 300.00117 * 8 6 5 34 34 H 1.07998 * 120.04171 * 180.25591 * 9 5 3 35 35 H 0.97001 * 120.00018 * 359.97438 * 13 11 10 36 36 H 1.09004 * 109.47357 * 59.99444 * 14 13 11 37 37 H 1.09003 * 109.46674 * 300.00181 * 14 13 11 38 38 H 1.09001 * 109.47241 * 300.00519 * 17 15 14 39 39 H 1.09002 * 109.46824 * 60.00417 * 17 15 14 40 40 H 1.09002 * 109.46642 * 180.02562 * 18 17 15 41 41 H 1.08993 * 109.46977 * 60.00690 * 18 17 15 42 42 H 1.09002 * 109.47398 * 185.00327 * 21 19 18 43 43 H 1.09001 * 109.47194 * 305.00507 * 21 19 18 44 44 H 0.96700 * 113.99509 * 180.02562 * 22 21 19 45 45 H 1.09002 * 109.46824 * 59.99708 * 23 19 18 46 46 H 1.09001 * 109.47241 * 179.97438 * 23 19 18 47 47 H 1.09002 * 109.47179 * 60.00416 * 24 15 14 48 48 H 1.09002 * 109.47493 * 300.00298 * 24 15 14 49 49 H 1.08000 * 120.04653 * 0.02656 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2095 -0.0005 6 6 4.3386 2.5180 -0.0011 7 8 4.2725 3.1049 1.3002 8 14 6.1197 2.2157 -0.4563 9 6 4.2859 0.0208 0.0043 10 6 3.5919 -1.1921 -0.0015 11 6 4.3328 -2.4687 -0.0020 12 8 5.5487 -2.4658 -0.0025 13 7 3.6617 -3.6374 -0.0020 14 6 4.3970 -4.9044 -0.0019 15 6 3.4056 -6.0697 -0.0013 16 9 2.5275 -5.9343 1.0793 17 6 2.6103 -6.0633 -1.3084 18 6 1.6183 -7.2282 -1.3075 19 6 2.3817 -8.5480 -1.1815 20 1 3.0658 -8.6540 -2.0235 21 6 1.3898 -9.7129 -1.1813 22 8 0.7302 -9.7771 -2.4474 23 6 3.1770 -8.5544 0.1256 24 6 4.1695 -7.3893 0.1244 25 6 2.1947 -1.1932 -0.0005 26 1 -0.3633 -0.0004 1.0277 27 1 -0.3633 0.8902 -0.5135 28 1 -0.3633 -0.8898 -0.5142 29 1 1.3219 2.7183 0.8827 30 1 3.8875 3.1938 -0.7278 31 1 4.7331 3.9519 1.3735 32 1 6.8603 3.5023 -0.4914 33 1 6.7460 1.2958 0.5269 34 1 5.3659 0.0259 0.0081 35 1 2.6917 -3.6397 -0.0013 36 1 5.0239 -4.9607 0.8881 37 1 5.0239 -4.9607 -0.8919 38 1 2.0661 -5.1231 -1.3980 39 1 3.2944 -6.1688 -2.1504 40 1 1.0521 -7.2238 -2.2389 41 1 0.9343 -7.1222 -0.4656 42 1 1.9248 -10.6457 -1.0026 43 1 0.6513 -9.5611 -0.3941 44 1 0.0851 -10.4939 -2.5188 45 1 2.4929 -8.4485 0.9676 46 1 3.7205 -9.4950 0.2156 47 1 4.7360 -7.3939 1.0556 48 1 4.8536 -7.4948 -0.7176 49 1 1.6548 -2.1285 -0.0014 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664722_13287732.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:50:42 Heat of formation + Delta-G solvation = -194.696559 kcal Electronic energy + Delta-G solvation = -32238.399644 eV Core-core repulsion = 27659.870939 eV Total energy + Delta-G solvation = -4578.528705 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.172 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -48.83497 -41.63220 -40.36418 -39.62311 -37.86646 -37.59801 -37.35151 -35.91282 -34.11774 -32.98052 -32.07812 -31.66098 -28.46132 -28.04509 -26.80144 -25.38894 -24.37441 -23.76084 -22.04673 -21.82651 -21.36888 -20.79314 -19.47636 -18.84022 -18.54696 -18.33656 -17.81588 -17.34490 -16.81577 -16.71952 -16.41752 -16.20470 -16.05031 -15.92725 -15.64312 -15.48295 -15.36055 -14.91852 -14.66944 -14.52480 -14.38458 -14.37658 -13.97184 -13.93862 -13.70421 -13.64619 -13.49106 -13.31319 -13.11046 -13.03764 -12.89258 -12.76832 -12.56983 -12.29256 -12.19261 -11.75201 -11.66283 -11.49086 -11.34115 -11.21285 -10.97382 -10.91095 -10.49046 -10.22818 -9.95545 -9.62608 -4.93485 -0.34717 0.10440 1.26560 1.60806 1.67656 1.96442 1.98629 2.59071 3.04528 3.10828 3.18270 3.23330 3.30308 3.42186 3.49604 3.56440 3.64868 3.73669 3.84463 3.91715 3.98933 4.09325 4.17295 4.18477 4.29177 4.30863 4.31787 4.40204 4.44923 4.49597 4.51550 4.57294 4.59010 4.64529 4.69503 4.71769 4.82307 4.84525 4.90436 4.99483 5.02641 5.10026 5.12834 5.13151 5.24327 5.25435 5.30291 5.36089 5.55352 6.36046 6.38208 6.57507 6.62083 7.13930 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.117 4.117 3 C 0.161 3.839 4 O -0.489 6.489 5 C -0.103 4.103 6 C -0.068 4.068 7 O -0.538 6.538 8 Si 0.681 3.319 9 C -0.047 4.047 10 C -0.139 4.139 11 C 0.564 3.436 12 O -0.531 6.531 13 N -0.723 5.723 14 C 0.100 3.900 15 C 0.112 3.888 16 F -0.201 7.201 17 C -0.139 4.139 18 C -0.112 4.112 19 C -0.089 4.089 20 H 0.080 0.920 21 C 0.079 3.921 22 O -0.574 6.574 23 C -0.114 4.114 24 C -0.135 4.135 25 C -0.065 4.065 26 H 0.073 0.927 27 H 0.077 0.923 28 H 0.071 0.929 29 H 0.398 0.602 30 H 0.083 0.917 31 H 0.382 0.618 32 H -0.257 1.257 33 H -0.250 1.250 34 H 0.145 0.855 35 H 0.403 0.597 36 H 0.082 0.918 37 H 0.090 0.910 38 H 0.074 0.926 39 H 0.086 0.914 40 H 0.078 0.922 41 H 0.067 0.933 42 H 0.046 0.954 43 H 0.046 0.954 44 H 0.381 0.619 45 H 0.072 0.928 46 H 0.073 0.927 47 H 0.082 0.918 48 H 0.087 0.913 49 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.463 -2.311 -1.343 4.375 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.117 4.117 3 C 0.115 3.885 4 O -0.301 6.301 5 C -0.103 4.103 6 C -0.178 4.178 7 O -0.346 6.346 8 Si 0.582 3.418 9 C -0.066 4.066 10 C -0.142 4.142 11 C 0.351 3.649 12 O -0.408 6.408 13 N -0.377 5.377 14 C -0.024 4.024 15 C 0.093 3.907 16 F -0.182 7.182 17 C -0.177 4.177 18 C -0.149 4.149 19 C -0.108 4.108 20 H 0.099 0.901 21 C 0.001 3.999 22 O -0.379 6.379 23 C -0.152 4.152 24 C -0.173 4.173 25 C -0.084 4.084 26 H 0.091 0.909 27 H 0.096 0.904 28 H 0.090 0.910 29 H 0.257 0.743 30 H 0.101 0.899 31 H 0.230 0.770 32 H -0.182 1.182 33 H -0.174 1.174 34 H 0.163 0.837 35 H 0.239 0.761 36 H 0.101 0.899 37 H 0.108 0.892 38 H 0.093 0.907 39 H 0.104 0.896 40 H 0.096 0.904 41 H 0.086 0.914 42 H 0.065 0.935 43 H 0.065 0.935 44 H 0.228 0.772 45 H 0.091 0.909 46 H 0.092 0.908 47 H 0.100 0.900 48 H 0.106 0.894 49 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -1.693 -2.325 -1.664 3.323 hybrid contribution -1.104 0.473 1.555 1.965 sum -2.797 -1.853 -0.109 3.357 Atomic orbital electron populations 1.20735 0.89670 1.03823 1.02838 1.20169 0.97313 0.91963 1.02302 1.18280 0.88751 0.85301 0.96165 1.84643 1.75675 1.35764 1.33996 1.19484 0.93018 0.93842 1.03992 1.24637 1.10719 0.94309 0.88127 1.86531 1.77736 1.40539 1.29752 0.94776 0.74335 0.82286 0.90396 1.21080 1.00845 0.90074 0.94552 1.19726 0.93429 0.93200 1.07824 1.18103 0.87180 0.83438 0.76152 1.90819 1.13239 1.87498 1.49270 1.45743 1.10616 1.05249 1.76076 1.21985 0.94322 0.81557 1.04505 1.21213 0.88632 0.95769 0.85038 1.92864 1.71051 1.96863 1.57381 1.22164 0.99251 1.00187 0.96121 1.21510 0.97526 0.92586 1.03300 1.21188 0.96752 0.94339 0.98513 0.90136 1.22207 0.94652 0.97654 0.85350 1.86462 1.59366 1.57022 1.35077 1.21499 0.97941 0.98234 0.97529 1.22042 0.98380 0.92482 1.04393 1.21100 0.92569 0.97835 0.96879 0.90870 0.90367 0.91004 0.74348 0.89919 0.76996 1.18192 1.17445 0.83741 0.76092 0.89933 0.89179 0.90739 0.89576 0.90372 0.91393 0.93528 0.93535 0.77195 0.90901 0.90803 0.89970 0.89435 0.85058 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.18 9.79 36.01 0.35 0.53 16 2 C -0.12 -0.04 5.89 -104.54 -0.62 -0.66 16 3 C 0.16 0.22 6.66 -39.02 -0.26 -0.04 16 4 O -0.49 -0.19 11.84 -18.84 -0.22 -0.41 16 5 C -0.10 -0.21 5.30 -104.53 -0.55 -0.76 16 6 C -0.07 -0.05 2.36 36.01 0.09 0.03 16 7 O -0.54 -0.55 12.86 -35.23 -0.45 -1.00 16 8 Si 0.68 0.37 30.20 -169.99 -5.13 -4.76 16 9 C -0.05 -0.13 8.20 -39.22 -0.32 -0.45 16 10 C -0.14 -0.29 5.87 -104.96 -0.62 -0.91 16 11 C 0.56 1.72 7.76 -12.44 -0.10 1.62 16 12 O -0.53 -3.43 16.34 5.29 0.09 -3.35 16 13 N -0.72 -0.21 5.12 -61.33 -0.31 -0.52 16 14 C 0.10 -0.03 4.85 -4.04 -0.02 -0.05 16 15 C 0.11 -0.15 0.84 -90.62 -0.08 -0.22 16 16 F -0.20 -0.14 15.41 2.25 0.03 -0.11 16 17 C -0.14 0.26 4.87 -26.73 -0.13 0.13 16 18 C -0.11 0.11 4.98 -26.73 -0.13 -0.02 16 19 C -0.09 0.11 2.43 -90.62 -0.22 -0.11 16 20 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 21 C 0.08 -0.10 6.43 37.16 0.24 0.14 16 22 O -0.57 0.04 13.19 -35.23 -0.46 -0.43 16 23 C -0.11 0.22 5.08 -26.70 -0.14 0.09 16 24 C -0.13 0.28 5.00 -26.71 -0.13 0.15 16 25 C -0.07 0.00 9.18 -39.22 -0.36 -0.36 16 26 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 27 H 0.08 -0.09 7.52 -51.93 -0.39 -0.48 16 28 H 0.07 -0.18 8.08 -51.93 -0.42 -0.60 16 29 H 0.40 -1.10 9.06 45.56 0.41 -0.69 16 30 H 0.08 -0.02 7.82 -51.93 -0.41 -0.43 16 31 H 0.38 -1.05 8.74 45.56 0.40 -0.65 16 32 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 33 H -0.25 -0.99 6.74 56.52 0.38 -0.61 16 34 H 0.15 0.47 4.47 -52.49 -0.23 0.23 16 35 H 0.40 -0.63 5.48 -40.82 -0.22 -0.86 16 36 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 37 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.07 -0.17 7.18 -51.93 -0.37 -0.54 16 39 H 0.09 -0.19 8.14 -51.93 -0.42 -0.62 16 40 H 0.08 0.00 7.82 -51.93 -0.41 -0.41 16 41 H 0.07 -0.03 7.80 -51.93 -0.41 -0.43 16 42 H 0.05 -0.09 8.14 -51.93 -0.42 -0.52 16 43 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 44 H 0.38 -1.51 9.12 45.56 0.42 -1.10 16 45 H 0.07 -0.09 7.80 -51.93 -0.41 -0.49 16 46 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 47 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 48 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 49 H 0.13 -0.33 6.39 -52.49 -0.34 -0.67 16 LS Contribution 393.03 15.07 5.92 5.92 Total: 0.00 -9.47 393.03 -9.36 -18.83 By element: Atomic # 1 Polarization: -7.46 SS G_CDS: -5.82 Total: -13.28 kcal Atomic # 6 Polarization: 2.11 SS G_CDS: -3.00 Total: -0.89 kcal Atomic # 7 Polarization: -0.21 SS G_CDS: -0.31 Total: -0.52 kcal Atomic # 8 Polarization: -4.14 SS G_CDS: -1.05 Total: -5.19 kcal Atomic # 9 Polarization: -0.14 SS G_CDS: 0.03 Total: -0.11 kcal Atomic # 14 Polarization: 0.37 SS G_CDS: -5.13 Total: -4.76 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -9.47 -9.36 -18.83 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_13287732.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -175.871 kcal (2) G-P(sol) polarization free energy of solvation -9.465 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -185.336 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.360 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.825 kcal (6) G-S(sol) free energy of system = (1) + (5) -194.697 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds