Wall clock time and date at job start Tue Mar 9 2021 13:50:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38975 * 119.95399 * 2 1 4 4 O 1.35710 * 119.91423 * 359.97438 * 3 2 1 5 5 C 1.39021 * 120.17485 * 180.02562 * 3 2 1 6 6 C 1.50700 * 119.95687 * 179.97438 * 5 3 2 7 7 O 1.42907 * 109.46821 * 74.99665 * 6 5 3 8 8 Si 1.86299 * 109.47354 * 194.99780 * 6 5 3 9 9 C 1.37681 * 120.08668 * 359.74078 * 5 3 2 10 10 C 1.39747 * 119.91206 * 0.53468 * 9 5 3 11 11 C 1.47600 * 120.09097 * 179.74574 * 10 9 5 12 12 O 1.21591 * 119.99529 * 359.72160 * 11 10 9 13 13 N 1.34770 * 120.00514 * 179.72399 * 11 10 9 14 14 C 1.46497 * 120.00569 * 180.02562 * 13 11 10 15 15 C 1.53000 * 109.47676 * 179.97438 * 14 13 11 16 16 F 1.39897 * 109.47108 * 305.00434 * 15 14 13 17 17 C 1.53006 * 109.46846 * 64.99596 * 15 14 13 18 18 C 1.53000 * 109.46846 * 180.02562 * 17 15 14 19 19 C 1.52993 * 109.47345 * 300.00008 * 18 17 15 20 20 H 1.09002 * 109.47493 * 300.00298 * 19 18 17 21 21 C 1.53000 * 109.47345 * 180.02562 * 19 18 17 22 22 O 1.42903 * 109.46726 * 65.00082 * 21 19 18 23 23 C 1.53006 * 109.47155 * 60.00181 * 19 18 17 24 24 C 1.52993 * 109.47345 * 184.99604 * 15 14 13 25 25 C 1.37716 * 119.95773 * 180.02562 * 2 1 3 26 26 H 1.09004 * 109.46918 * 269.97739 * 1 2 3 27 27 H 1.08999 * 109.47082 * 29.97745 * 1 2 3 28 28 H 1.09000 * 109.46904 * 149.97652 * 1 2 3 29 29 H 0.96703 * 114.00160 * 90.00291 * 4 3 2 30 30 H 1.09004 * 109.47147 * 315.00126 * 6 5 3 31 31 H 0.96698 * 113.99684 * 180.02562 * 7 6 5 32 32 H 1.48498 * 109.99758 * 178.68026 * 8 6 5 33 33 H 1.48499 * 109.99985 * 300.00117 * 8 6 5 34 34 H 1.07998 * 120.04171 * 180.25591 * 9 5 3 35 35 H 0.97001 * 120.00018 * 359.97438 * 13 11 10 36 36 H 1.09004 * 109.47357 * 59.99444 * 14 13 11 37 37 H 1.09003 * 109.46674 * 300.00181 * 14 13 11 38 38 H 1.09001 * 109.47241 * 300.00519 * 17 15 14 39 39 H 1.09002 * 109.46824 * 60.00417 * 17 15 14 40 40 H 1.09002 * 109.46642 * 180.02562 * 18 17 15 41 41 H 1.08993 * 109.46977 * 60.00690 * 18 17 15 42 42 H 1.09002 * 109.47398 * 185.00327 * 21 19 18 43 43 H 1.09001 * 109.47194 * 305.00507 * 21 19 18 44 44 H 0.96700 * 113.99509 * 180.02562 * 22 21 19 45 45 H 1.09002 * 109.46824 * 59.99708 * 23 19 18 46 46 H 1.09001 * 109.47241 * 179.97438 * 23 19 18 47 47 H 1.09002 * 109.47179 * 60.00416 * 24 15 14 48 48 H 1.09002 * 109.47493 * 300.00298 * 24 15 14 49 49 H 1.08000 * 120.04653 * 0.02656 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2095 -0.0005 6 6 4.3386 2.5180 -0.0011 7 8 4.2725 3.1049 1.3002 8 14 6.1197 2.2157 -0.4563 9 6 4.2859 0.0208 0.0043 10 6 3.5919 -1.1921 -0.0015 11 6 4.3328 -2.4687 -0.0020 12 8 5.5487 -2.4658 -0.0025 13 7 3.6617 -3.6374 -0.0020 14 6 4.3970 -4.9044 -0.0019 15 6 3.4056 -6.0697 -0.0013 16 9 2.5275 -5.9343 1.0793 17 6 2.6103 -6.0633 -1.3084 18 6 1.6183 -7.2282 -1.3075 19 6 2.3817 -8.5480 -1.1815 20 1 3.0658 -8.6540 -2.0235 21 6 1.3898 -9.7129 -1.1813 22 8 0.7302 -9.7771 -2.4474 23 6 3.1770 -8.5544 0.1256 24 6 4.1695 -7.3893 0.1244 25 6 2.1947 -1.1932 -0.0005 26 1 -0.3633 -0.0004 1.0277 27 1 -0.3633 0.8902 -0.5135 28 1 -0.3633 -0.8898 -0.5142 29 1 1.3219 2.7183 0.8827 30 1 3.8875 3.1938 -0.7278 31 1 4.7331 3.9519 1.3735 32 1 6.8603 3.5023 -0.4914 33 1 6.7460 1.2958 0.5269 34 1 5.3659 0.0259 0.0081 35 1 2.6917 -3.6397 -0.0013 36 1 5.0239 -4.9607 0.8881 37 1 5.0239 -4.9607 -0.8919 38 1 2.0661 -5.1231 -1.3980 39 1 3.2944 -6.1688 -2.1504 40 1 1.0521 -7.2238 -2.2389 41 1 0.9343 -7.1222 -0.4656 42 1 1.9248 -10.6457 -1.0026 43 1 0.6513 -9.5611 -0.3941 44 1 0.0851 -10.4939 -2.5188 45 1 2.4929 -8.4485 0.9676 46 1 3.7205 -9.4950 0.2156 47 1 4.7360 -7.3939 1.0556 48 1 4.8536 -7.4948 -0.7176 49 1 1.6548 -2.1285 -0.0014 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664722_13287732.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:50:40 Heat of formation + Delta-G solvation = -198.022724 kcal Electronic energy + Delta-G solvation = -32238.543877 eV Core-core repulsion = 27659.870939 eV Total energy + Delta-G solvation = -4578.672938 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.172 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -48.82970 -41.72793 -40.48337 -39.54245 -37.91112 -37.60869 -37.33996 -36.00892 -34.13391 -32.99070 -31.95085 -31.67324 -28.43474 -28.00289 -26.84826 -25.38058 -24.33817 -23.70897 -22.05016 -21.78467 -21.47727 -20.70261 -19.50258 -18.91882 -18.59792 -18.25557 -17.89535 -17.29707 -16.83677 -16.74583 -16.42900 -16.27894 -16.14977 -15.89204 -15.61896 -15.50779 -15.36352 -14.97571 -14.68937 -14.54608 -14.30800 -14.26643 -14.03494 -13.91072 -13.72183 -13.64687 -13.50709 -13.18639 -13.04603 -12.98418 -12.86462 -12.69104 -12.62746 -12.22247 -12.07107 -11.97699 -11.55532 -11.51476 -11.34810 -11.13744 -11.07857 -10.80180 -10.55137 -10.37371 -10.00363 -9.68323 -5.02067 -0.43954 0.03831 1.18928 1.47989 1.53834 1.84311 1.89409 2.48866 3.10826 3.15820 3.22544 3.29177 3.39592 3.50397 3.56767 3.59897 3.63351 3.70963 3.94155 3.96645 4.03559 4.14123 4.22434 4.29560 4.34102 4.40039 4.40789 4.44278 4.54995 4.57661 4.61625 4.64217 4.66557 4.70520 4.80713 4.83669 4.94850 5.00302 5.01285 5.02029 5.06933 5.11506 5.15336 5.19731 5.25243 5.29993 5.34302 5.46933 5.56447 6.28096 6.51340 6.67241 6.88776 6.98346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.118 4.118 3 C 0.158 3.842 4 O -0.493 6.493 5 C -0.116 4.116 6 C -0.065 4.065 7 O -0.552 6.552 8 Si 0.739 3.261 9 C -0.064 4.064 10 C -0.152 4.152 11 C 0.562 3.438 12 O -0.575 6.575 13 N -0.710 5.710 14 C 0.099 3.901 15 C 0.118 3.882 16 F -0.212 7.212 17 C -0.137 4.137 18 C -0.108 4.108 19 C -0.090 4.090 20 H 0.076 0.924 21 C 0.077 3.923 22 O -0.594 6.594 23 C -0.110 4.110 24 C -0.136 4.136 25 C -0.056 4.056 26 H 0.083 0.917 27 H 0.074 0.926 28 H 0.085 0.915 29 H 0.412 0.588 30 H 0.098 0.902 31 H 0.397 0.603 32 H -0.272 1.272 33 H -0.305 1.305 34 H 0.130 0.870 35 H 0.413 0.587 36 H 0.072 0.928 37 H 0.095 0.905 38 H 0.081 0.919 39 H 0.093 0.907 40 H 0.068 0.932 41 H 0.061 0.939 42 H 0.054 0.946 43 H 0.049 0.951 44 H 0.395 0.605 45 H 0.065 0.935 46 H 0.082 0.918 47 H 0.082 0.918 48 H 0.099 0.901 49 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.058 -2.522 -1.680 5.896 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.119 4.119 3 C 0.112 3.888 4 O -0.307 6.307 5 C -0.116 4.116 6 C -0.175 4.175 7 O -0.362 6.362 8 Si 0.645 3.355 9 C -0.083 4.083 10 C -0.155 4.155 11 C 0.350 3.650 12 O -0.455 6.455 13 N -0.363 5.363 14 C -0.025 4.025 15 C 0.100 3.900 16 F -0.192 7.192 17 C -0.175 4.175 18 C -0.145 4.145 19 C -0.108 4.108 20 H 0.094 0.906 21 C -0.001 4.001 22 O -0.402 6.402 23 C -0.148 4.148 24 C -0.174 4.174 25 C -0.075 4.075 26 H 0.101 0.899 27 H 0.093 0.907 28 H 0.104 0.896 29 H 0.272 0.728 30 H 0.116 0.884 31 H 0.248 0.752 32 H -0.198 1.198 33 H -0.233 1.233 34 H 0.147 0.853 35 H 0.251 0.749 36 H 0.090 0.910 37 H 0.113 0.887 38 H 0.099 0.901 39 H 0.111 0.889 40 H 0.087 0.913 41 H 0.080 0.920 42 H 0.073 0.927 43 H 0.067 0.933 44 H 0.245 0.755 45 H 0.084 0.916 46 H 0.101 0.899 47 H 0.101 0.899 48 H 0.117 0.883 49 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -3.339 -2.536 -2.007 4.649 hybrid contribution -0.624 0.515 1.711 1.892 sum -3.963 -2.021 -0.297 4.458 Atomic orbital electron populations 1.20778 0.88002 1.04404 1.03618 1.20437 0.98468 0.91553 1.01437 1.18403 0.88560 0.86060 0.95792 1.84606 1.75381 1.35453 1.35232 1.19612 0.93674 0.93902 1.04443 1.24607 1.10203 0.94293 0.88383 1.86491 1.78064 1.41720 1.29938 0.94062 0.73467 0.79008 0.88940 1.21065 1.00325 0.91039 0.95863 1.19740 0.94372 0.92444 1.08915 1.18315 0.86736 0.84350 0.75571 1.90792 1.15044 1.88093 1.51605 1.45667 1.11132 1.04800 1.74679 1.22046 0.94618 0.81554 1.04277 1.21225 0.88284 0.95640 0.84891 1.92844 1.71426 1.96918 1.58054 1.22162 0.99195 1.00225 0.95909 1.21445 0.97513 0.93108 1.02448 1.21194 0.96732 0.94271 0.98623 0.90554 1.22269 0.94777 0.98011 0.85046 1.86420 1.60047 1.58084 1.35677 1.21461 0.97774 0.98689 0.96841 1.22083 0.98466 0.91874 1.05006 1.21339 0.91608 0.99060 0.95465 0.89891 0.90661 0.89568 0.72787 0.88378 0.75208 1.19809 1.23307 0.85284 0.74867 0.90969 0.88697 0.90065 0.88887 0.91320 0.92021 0.92734 0.93278 0.75511 0.91621 0.89908 0.89901 0.88262 0.82376 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.55 9.79 71.24 0.70 1.25 16 2 C -0.12 0.04 5.89 -19.81 -0.12 -0.08 16 3 C 0.16 0.37 6.66 22.63 0.15 0.52 16 4 O -0.49 0.08 11.84 -90.31 -1.07 -0.99 16 5 C -0.12 -0.54 5.30 -19.81 -0.10 -0.64 16 6 C -0.06 -0.12 2.36 71.24 0.17 0.04 16 7 O -0.55 -1.24 12.86 -148.98 -1.92 -3.16 16 8 Si 0.74 2.06 30.20 68.60 2.07 4.13 16 9 C -0.06 -0.46 8.20 22.50 0.18 -0.28 16 10 C -0.15 -0.76 5.87 -20.08 -0.12 -0.88 16 11 C 0.56 4.13 7.76 86.72 0.67 4.80 16 12 O -0.57 -8.80 16.34 -4.00 -0.07 -8.86 16 13 N -0.71 -0.58 5.12 -466.20 -2.39 -2.96 16 14 C 0.10 -0.02 4.85 86.38 0.42 0.40 16 15 C 0.12 -0.33 0.84 -10.79 -0.01 -0.34 16 16 F -0.21 -0.25 15.41 44.97 0.69 0.45 16 17 C -0.14 0.58 4.87 30.60 0.15 0.73 16 18 C -0.11 0.24 4.98 30.59 0.15 0.39 16 19 C -0.09 0.25 2.43 -10.79 -0.03 0.22 16 20 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 21 C 0.08 -0.21 6.43 71.98 0.46 0.25 16 22 O -0.59 0.17 13.19 -148.98 -1.97 -1.79 16 23 C -0.11 0.47 5.08 30.61 0.16 0.62 16 24 C -0.14 0.62 5.00 30.61 0.15 0.77 16 25 C -0.06 0.03 9.18 22.50 0.21 0.24 16 26 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 27 H 0.07 -0.29 7.52 -2.39 -0.02 -0.30 16 28 H 0.09 -0.65 8.08 -2.39 -0.02 -0.67 16 29 H 0.41 -2.68 9.06 -74.05 -0.67 -3.35 16 30 H 0.10 -0.11 7.82 -2.39 -0.02 -0.13 16 31 H 0.40 -2.19 8.74 -74.06 -0.65 -2.84 16 32 H -0.27 -1.35 7.11 99.48 0.71 -0.64 16 33 H -0.30 -3.61 6.74 99.48 0.67 -2.94 16 34 H 0.13 1.25 4.47 -2.91 -0.01 1.24 16 35 H 0.41 -1.57 5.48 -92.71 -0.51 -2.08 16 36 H 0.07 0.16 8.14 -2.38 -0.02 0.15 16 37 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 38 H 0.08 -0.45 7.18 -2.39 -0.02 -0.47 16 39 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 40 H 0.07 0.00 7.82 -2.39 -0.02 -0.02 16 41 H 0.06 -0.05 7.80 -2.39 -0.02 -0.07 16 42 H 0.05 -0.25 8.14 -2.39 -0.02 -0.27 16 43 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 44 H 0.40 -3.21 9.12 -74.06 -0.68 -3.89 16 45 H 0.07 -0.16 7.80 -2.39 -0.02 -0.18 16 46 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 47 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 48 H 0.10 -0.67 8.14 -2.39 -0.02 -0.69 16 49 H 0.16 -1.09 6.39 -2.91 -0.02 -1.11 16 Total: 0.00 -22.91 393.03 -2.92 -25.84 By element: Atomic # 1 Polarization: -19.18 SS G_CDS: -1.48 Total: -20.66 kcal Atomic # 6 Polarization: 4.82 SS G_CDS: 3.20 Total: 8.01 kcal Atomic # 7 Polarization: -0.58 SS G_CDS: -2.39 Total: -2.96 kcal Atomic # 8 Polarization: -9.78 SS G_CDS: -5.02 Total: -14.80 kcal Atomic # 9 Polarization: -0.25 SS G_CDS: 0.69 Total: 0.45 kcal Atomic # 14 Polarization: 2.06 SS G_CDS: 2.07 Total: 4.13 kcal Total: -22.91 -2.92 -25.84 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_13287732.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -172.187 kcal (2) G-P(sol) polarization free energy of solvation -22.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -195.102 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.921 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.836 kcal (6) G-S(sol) free energy of system = (1) + (5) -198.023 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds