Wall clock time and date at job start Tue Mar 9 2021 13:51:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.37866 * 126.46110 * 2 1 4 4 C 1.46680 * 126.23126 * 359.96756 * 3 2 1 5 5 O 1.21693 * 120.00097 * 359.71441 * 4 3 2 6 6 N 1.34777 * 119.99703 * 179.71115 * 4 3 2 7 7 C 1.46499 * 119.99665 * 179.72441 * 6 4 3 8 8 C 1.53004 * 109.47198 * 180.27868 * 7 6 4 9 9 F 1.39906 * 109.47024 * 60.00093 * 8 7 6 10 10 C 1.52997 * 109.47000 * 179.97438 * 8 7 6 11 11 C 1.53004 * 109.47000 * 180.02562 * 10 8 7 12 12 C 1.53004 * 109.47053 * 300.00428 * 11 10 8 13 13 H 1.09006 * 109.47154 * 299.99998 * 12 11 10 14 14 C 1.53004 * 109.47377 * 180.02562 * 12 11 10 15 15 O 1.42894 * 109.47194 * 175.00106 * 14 12 11 16 16 C 1.53000 * 109.47306 * 59.99450 * 12 11 10 17 17 C 1.52996 * 109.47274 * 300.00264 * 16 12 11 18 18 N 1.37655 * 107.53348 * 179.70261 * 3 2 1 19 19 C 1.35525 * 108.64376 * 0.26880 * 18 3 2 20 20 C 1.50698 * 125.56384 * 179.97438 * 19 18 3 21 21 O 1.42905 * 109.47364 * 120.01861 * 20 19 18 22 22 Si 1.86305 * 109.47132 * 0.02562 * 20 19 18 23 23 C 1.35452 * 108.87395 * 359.97438 * 19 18 3 24 24 H 1.08995 * 109.47392 * 89.99408 * 1 2 3 25 25 H 1.08993 * 109.47084 * 210.00121 * 1 2 3 26 26 H 1.09000 * 109.46637 * 329.99497 * 1 2 3 27 27 H 0.97001 * 120.00485 * 0.02562 * 6 4 3 28 28 H 1.09009 * 109.47454 * 300.27637 * 7 6 4 29 29 H 1.08998 * 109.47492 * 60.27932 * 7 6 4 30 30 H 1.08995 * 109.47672 * 299.99669 * 10 8 7 31 31 H 1.09007 * 109.47288 * 60.00489 * 10 8 7 32 32 H 1.08998 * 109.47285 * 60.00156 * 11 10 8 33 33 H 1.08996 * 109.47095 * 180.02562 * 11 10 8 34 34 H 1.09008 * 109.46327 * 294.99747 * 14 12 11 35 35 H 1.08994 * 109.46833 * 54.99562 * 14 12 11 36 36 H 0.96702 * 113.99732 * 180.02562 * 15 14 12 37 37 H 1.08998 * 109.46722 * 60.00462 * 16 12 11 38 38 H 1.09000 * 109.47116 * 179.97438 * 16 12 11 39 39 H 1.08998 * 109.47408 * 299.99779 * 17 16 12 40 40 H 1.08996 * 109.46856 * 179.97438 * 17 16 12 41 41 H 0.96998 * 125.67336 * 180.23565 * 18 3 2 42 42 H 1.09002 * 109.47253 * 240.01675 * 20 19 18 43 43 H 0.96700 * 113.99912 * 300.00278 * 21 20 19 44 44 H 1.48497 * 109.99872 * 58.68001 * 22 20 19 45 45 H 1.48496 * 110.00091 * 180.02562 * 22 20 19 46 46 H 1.08005 * 126.07073 * 179.97438 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3264 1.1088 0.0000 4 6 1.8900 2.5092 -0.0007 5 8 0.7028 2.7766 -0.0066 6 7 2.8039 3.4998 0.0053 7 6 2.3681 4.8984 -0.0015 8 6 3.5936 5.8145 0.0004 9 9 4.3667 5.5614 -1.1379 10 6 3.1384 7.2752 -0.0073 11 6 4.3639 8.1912 -0.0061 12 6 5.1993 7.9239 1.2475 13 1 4.5970 8.1214 2.1344 14 6 6.4244 8.8403 1.2491 15 8 7.1419 8.6743 2.4737 16 6 5.6543 6.4631 1.2552 17 6 4.4288 5.5471 1.2540 18 7 3.6285 0.6623 0.0068 19 6 3.6218 -0.6929 0.0049 20 6 4.8433 -1.5755 0.0102 21 8 4.8286 -2.4024 1.1756 22 14 6.3753 -0.5154 0.0204 23 6 2.3379 -1.1248 -0.0024 24 1 -0.3634 0.0001 -1.0276 25 1 -0.3633 -0.8899 0.5138 26 1 -0.3632 0.8900 0.5139 27 1 3.7502 3.2867 0.0097 28 1 1.7731 5.0894 -0.8947 29 1 1.7657 5.0956 0.8853 30 1 2.5437 7.4658 -0.9007 31 1 2.5358 7.4727 0.8793 32 1 4.9661 7.9937 -0.8929 33 1 4.0396 9.2318 -0.0112 34 1 7.0718 8.5827 0.4108 35 1 6.1025 9.8773 1.1543 36 1 7.9327 9.2264 2.5442 37 1 6.2565 6.2656 0.3685 38 1 6.2498 6.2728 2.1481 39 1 3.8266 5.7447 2.1408 40 1 4.7531 4.5065 1.2591 41 1 4.4191 1.2242 0.0116 42 1 4.8417 -2.2033 -0.8809 43 1 4.8291 -1.9096 2.0075 44 1 6.3736 0.3681 1.2140 45 1 7.5870 -1.3738 0.0250 46 1 2.0135 -2.1549 -0.0059 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664722_13940406.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:51:17 Heat of formation + Delta-G solvation = -136.178401 kcal Electronic energy + Delta-G solvation = -28848.563444 eV Core-core repulsion = 24654.054699 eV Total energy + Delta-G solvation = -4194.508745 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.168 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -48.88426 -42.59907 -40.33140 -39.62379 -37.94697 -37.46861 -35.99378 -33.67584 -32.82687 -32.13610 -31.36614 -28.70816 -28.24665 -26.67288 -24.94851 -24.18341 -22.42561 -21.97179 -21.56596 -20.91493 -20.37184 -19.84092 -18.37437 -18.05061 -17.46139 -17.29147 -16.92199 -16.76572 -16.41292 -16.16470 -16.11317 -15.74326 -15.55386 -15.14711 -14.94639 -14.81400 -14.52256 -14.42562 -14.13526 -13.90692 -13.90651 -13.62692 -13.47524 -13.36542 -13.34929 -13.15256 -12.98897 -12.83912 -12.61733 -12.34197 -12.24745 -12.20045 -11.71277 -11.38420 -11.26909 -10.99304 -10.95455 -10.80148 -10.30690 -9.77253 -9.14908 -5.28896 0.33914 0.95683 1.25845 1.61767 1.66746 1.88294 1.98071 2.36221 2.99746 3.13198 3.16038 3.23982 3.35536 3.44184 3.55069 3.73752 3.80082 3.87153 4.04842 4.12026 4.19216 4.21955 4.25875 4.30796 4.38166 4.38815 4.45480 4.47092 4.55217 4.66752 4.76230 4.79128 4.79565 4.84105 4.93893 4.94926 5.03793 5.05672 5.15220 5.18687 5.24701 5.30519 5.47709 5.67811 5.93527 6.15721 6.24801 6.36261 6.58315 7.09480 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.067 4.067 3 C -0.052 4.052 4 C 0.592 3.408 5 O -0.519 6.519 6 N -0.731 5.731 7 C 0.102 3.898 8 C 0.112 3.888 9 F -0.201 7.201 10 C -0.135 4.135 11 C -0.115 4.115 12 C -0.089 4.089 13 H 0.080 0.920 14 C 0.079 3.921 15 O -0.574 6.574 16 C -0.112 4.112 17 C -0.139 4.139 18 N -0.535 5.535 19 C 0.018 3.982 20 C -0.044 4.044 21 O -0.519 6.519 22 Si 0.664 3.336 23 C -0.172 4.172 24 H 0.070 0.930 25 H 0.064 0.936 26 H 0.080 0.920 27 H 0.396 0.604 28 H 0.085 0.915 29 H 0.090 0.910 30 H 0.083 0.917 31 H 0.087 0.913 32 H 0.073 0.927 33 H 0.074 0.926 34 H 0.047 0.953 35 H 0.047 0.953 36 H 0.381 0.619 37 H 0.068 0.932 38 H 0.077 0.923 39 H 0.086 0.914 40 H 0.070 0.930 41 H 0.411 0.589 42 H 0.133 0.867 43 H 0.378 0.622 44 H -0.254 1.254 45 H -0.243 1.243 46 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.664 3.646 -0.788 5.229 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.075 4.075 3 C -0.165 4.165 4 C 0.381 3.619 5 O -0.395 6.395 6 N -0.384 5.384 7 C -0.022 4.022 8 C 0.093 3.907 9 F -0.181 7.181 10 C -0.173 4.173 11 C -0.152 4.152 12 C -0.108 4.108 13 H 0.098 0.902 14 C 0.001 3.999 15 O -0.380 6.380 16 C -0.149 4.149 17 C -0.177 4.177 18 N -0.136 5.136 19 C -0.099 4.099 20 C -0.155 4.155 21 O -0.324 6.324 22 Si 0.563 3.437 23 C -0.197 4.197 24 H 0.088 0.912 25 H 0.083 0.917 26 H 0.099 0.901 27 H 0.230 0.770 28 H 0.103 0.897 29 H 0.108 0.892 30 H 0.102 0.898 31 H 0.105 0.895 32 H 0.092 0.908 33 H 0.093 0.907 34 H 0.065 0.935 35 H 0.065 0.935 36 H 0.228 0.772 37 H 0.087 0.913 38 H 0.096 0.904 39 H 0.104 0.896 40 H 0.089 0.911 41 H 0.250 0.750 42 H 0.150 0.850 43 H 0.226 0.774 44 H -0.178 1.178 45 H -0.166 1.166 46 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 3.181 3.294 -0.718 4.635 hybrid contribution 1.076 0.225 0.826 1.375 sum 4.257 3.519 0.109 5.524 Atomic orbital electron populations 1.20391 0.88881 1.03152 1.02576 1.20044 0.96085 0.90483 1.00910 1.20118 0.83352 0.93334 1.19668 1.16990 0.85731 0.82895 0.76329 1.90850 1.15800 1.83113 1.49692 1.45780 1.09575 1.06073 1.76989 1.21972 0.95900 0.79667 1.04617 1.21209 0.89711 0.96210 0.83559 1.92872 1.77002 1.95342 1.52898 1.22028 0.98876 0.91821 1.04545 1.21492 0.95985 0.99732 0.98003 1.21189 0.95631 0.94989 0.98980 0.90151 1.22207 0.93160 0.98205 0.86299 1.86459 1.43490 1.68857 1.39150 1.21511 0.96784 0.93342 1.03298 1.22150 0.97888 1.00698 0.96977 1.41994 1.07081 1.06437 1.58068 1.20805 0.97699 0.82588 1.08769 1.24469 1.00754 0.98144 0.92140 1.86669 1.95347 1.34842 1.15574 0.95731 0.77511 0.82096 0.88350 1.20643 0.90488 0.99134 1.09416 0.91156 0.91685 0.90084 0.77005 0.89701 0.89202 0.89849 0.89456 0.90845 0.90739 0.93507 0.93476 0.77168 0.91323 0.90428 0.89563 0.91128 0.75007 0.84973 0.77398 1.17816 1.16593 0.83485 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.21 9.83 36.01 0.35 0.14 16 2 C -0.07 -0.17 6.21 -104.16 -0.65 -0.82 16 3 C -0.05 -0.10 7.06 -81.98 -0.58 -0.67 16 4 C 0.59 1.49 7.79 -12.85 -0.10 1.39 16 5 O -0.52 -2.92 14.81 5.20 0.08 -2.84 16 6 N -0.73 0.28 5.18 -61.61 -0.32 -0.04 16 7 C 0.10 -0.09 4.88 -4.04 -0.02 -0.11 16 8 C 0.11 -0.20 0.85 -90.62 -0.08 -0.28 16 9 F -0.20 -0.02 15.63 2.25 0.04 0.02 16 10 C -0.13 0.34 5.00 -26.73 -0.13 0.21 16 11 C -0.11 0.27 5.08 -26.73 -0.14 0.13 16 12 C -0.09 0.14 2.43 -90.62 -0.22 -0.08 16 13 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 14 C 0.08 -0.12 6.43 37.16 0.24 0.12 16 15 O -0.57 0.17 13.19 -35.23 -0.46 -0.30 16 16 C -0.11 0.15 4.98 -26.73 -0.13 0.02 16 17 C -0.14 0.31 4.83 -26.73 -0.13 0.18 16 18 N -0.54 0.42 5.47 -5.70 -0.03 0.39 16 19 C 0.02 0.00 6.11 -81.96 -0.50 -0.50 16 20 C -0.04 0.06 2.98 36.00 0.11 0.17 16 21 O -0.52 -0.06 12.87 -35.23 -0.45 -0.51 16 22 Si 0.66 -1.72 30.96 -169.99 -5.26 -6.98 16 23 C -0.17 -0.25 10.64 -39.98 -0.43 -0.68 16 24 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 25 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 26 H 0.08 0.30 6.49 -51.93 -0.34 -0.04 16 27 H 0.40 -0.93 6.39 -40.82 -0.26 -1.19 16 28 H 0.08 0.00 8.14 -51.92 -0.42 -0.42 16 29 H 0.09 -0.09 8.14 -51.93 -0.42 -0.52 16 30 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 31 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 32 H 0.07 -0.12 7.80 -51.93 -0.41 -0.52 16 33 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.05 -0.09 8.14 -51.92 -0.42 -0.52 16 35 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.38 -1.59 9.12 45.56 0.42 -1.18 16 37 H 0.07 -0.06 7.80 -51.93 -0.41 -0.46 16 38 H 0.08 -0.02 7.82 -51.93 -0.41 -0.43 16 39 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 40 H 0.07 -0.19 6.86 -51.93 -0.36 -0.55 16 41 H 0.41 -1.38 5.98 -40.82 -0.24 -1.63 16 42 H 0.13 -0.30 7.96 -51.93 -0.41 -0.71 16 43 H 0.38 -0.98 8.70 45.56 0.40 -0.58 16 44 H -0.25 0.27 7.11 56.52 0.40 0.67 16 45 H -0.24 -0.19 7.11 56.52 0.40 0.21 16 46 H 0.15 0.12 8.06 -52.48 -0.42 -0.31 16 LS Contribution 369.96 15.07 5.58 5.58 Total: 0.00 -8.42 369.96 -9.53 -17.96 By element: Atomic # 1 Polarization: -6.20 SS G_CDS: -6.29 Total: -12.48 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -2.40 Total: -0.79 kcal Atomic # 7 Polarization: 0.70 SS G_CDS: -0.35 Total: 0.35 kcal Atomic # 8 Polarization: -2.81 SS G_CDS: -0.84 Total: -3.65 kcal Atomic # 9 Polarization: -0.02 SS G_CDS: 0.04 Total: 0.02 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.26 Total: -6.98 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -8.42 -9.53 -17.96 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_13940406.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.222 kcal (2) G-P(sol) polarization free energy of solvation -8.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.647 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.532 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.956 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.178 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds