Wall clock time and date at job start Tue Mar 9 2021 13:51:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46904 * 2 1 4 4 C 1.50696 * 109.47355 * 119.99984 * 2 1 3 5 5 C 1.34848 * 125.89018 * 244.96041 * 4 2 1 6 6 C 1.40896 * 107.41414 * 179.80216 * 5 4 2 7 7 C 1.34853 * 107.41776 * 0.37819 * 6 5 4 8 8 C 1.50697 * 125.89148 * 179.88027 * 7 6 5 9 9 C 1.50700 * 109.47135 * 274.69630 * 8 7 6 10 10 O 1.21278 * 120.00548 * 359.97438 * 9 8 7 11 11 N 1.34782 * 119.99764 * 179.97438 * 9 8 7 12 12 C 1.46499 * 120.00273 * 179.97438 * 11 9 8 13 13 C 1.52992 * 109.47658 * 180.02562 * 12 11 9 14 14 F 1.39900 * 109.47126 * 305.00034 * 13 12 11 15 15 C 1.53006 * 109.47223 * 64.99659 * 13 12 11 16 16 C 1.52997 * 109.47164 * 180.02562 * 15 13 12 17 17 C 1.53002 * 109.46978 * 299.99874 * 16 15 13 18 18 H 1.08992 * 109.47056 * 300.00064 * 17 16 15 19 19 C 1.52997 * 109.46978 * 180.02562 * 17 16 15 20 20 O 1.42899 * 109.47052 * 65.00120 * 19 17 16 21 21 C 1.52996 * 109.46891 * 60.00410 * 17 16 15 22 22 C 1.52997 * 109.47482 * 184.99947 * 13 12 11 23 23 N 1.36343 * 108.21765 * 359.62344 * 7 6 5 24 24 H 0.96696 * 114.00146 * 299.99425 * 1 2 3 25 25 H 1.08999 * 109.47266 * 240.00284 * 2 1 3 26 26 H 1.48503 * 110.00082 * 300.00117 * 3 2 1 27 27 H 1.48503 * 109.99951 * 61.31947 * 3 2 1 28 28 H 1.07990 * 126.29575 * 0.05905 * 5 4 2 29 29 H 1.07998 * 126.29147 * 180.24133 * 6 5 4 30 30 H 1.09000 * 109.47326 * 154.69682 * 8 7 6 31 31 H 1.09004 * 109.47311 * 34.69530 * 8 7 6 32 32 H 0.97002 * 119.99790 * 359.97438 * 11 9 8 33 33 H 1.09001 * 109.46952 * 59.99319 * 12 11 9 34 34 H 1.09004 * 109.46722 * 300.00399 * 12 11 9 35 35 H 1.09001 * 109.47002 * 60.00080 * 15 13 12 36 36 H 1.09000 * 109.47050 * 300.00346 * 15 13 12 37 37 H 1.09002 * 109.47045 * 180.02562 * 16 15 13 38 38 H 1.09001 * 109.47375 * 59.99966 * 16 15 13 39 39 H 1.08994 * 109.47445 * 185.00212 * 19 17 16 40 40 H 1.09000 * 109.47459 * 305.00519 * 19 17 16 41 41 H 0.96707 * 113.99928 * 179.97438 * 20 19 17 42 42 H 1.09004 * 109.47368 * 179.97438 * 21 17 16 43 43 H 1.09001 * 109.47372 * 59.99964 * 21 17 16 44 44 H 1.09002 * 109.47153 * 59.99783 * 22 13 12 45 45 H 1.09001 * 109.46832 * 299.99974 * 22 13 12 46 46 H 0.97000 * 125.63631 * 180.21612 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6309 -0.1488 2.2373 6 6 2.8942 -1.1596 3.1829 7 6 2.3529 -2.3021 2.7138 8 6 2.3934 -3.6446 3.3972 9 6 3.6800 -4.3473 3.0483 10 8 4.4848 -3.8111 2.3164 11 7 3.9365 -5.5718 3.5497 12 6 5.1870 -6.2553 3.2102 13 6 5.2281 -7.6182 3.9041 14 9 5.0420 -7.4467 5.2800 15 6 4.1159 -8.5084 3.3461 16 6 4.1566 -9.8711 4.0405 17 6 5.5134 -10.5317 3.7882 18 1 5.6586 -10.6656 2.7164 19 6 5.5539 -11.8946 4.4821 20 8 4.5925 -12.7641 3.8806 21 6 6.6256 -9.6415 4.3463 22 6 6.5850 -8.2785 3.6514 23 7 1.7577 -2.0320 1.5172 24 1 -0.3933 0.4416 0.7651 25 1 1.7924 -0.5138 -0.8900 26 1 1.5614 2.4679 -1.2085 27 1 1.5878 2.4586 1.2243 28 1 2.9302 0.8864 2.3081 29 1 3.4327 -1.0415 4.1115 30 1 1.5484 -4.2474 3.0643 31 1 2.3370 -3.5046 4.4767 32 1 3.2930 -6.0006 4.1354 33 1 6.0322 -5.6524 3.5421 34 1 5.2427 -6.3957 2.1307 35 1 4.2608 -8.6420 2.2741 36 1 3.1492 -8.0380 3.5261 37 1 3.3645 -10.5055 3.6426 38 1 4.0114 -9.7372 5.1125 39 1 6.5494 -12.3261 4.3777 40 1 5.3205 -11.7711 5.5396 41 1 4.5631 -13.6483 4.2713 42 1 7.5922 -10.1122 4.1670 43 1 6.4804 -9.5076 5.4183 44 1 7.3773 -7.6443 4.0490 45 1 6.7299 -8.4121 2.5794 46 1 1.2886 -2.6739 0.9616 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664722_14644196.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:51:19 Heat of formation + Delta-G solvation = -140.097916 kcal Electronic energy + Delta-G solvation = -27976.941198 eV Core-core repulsion = 23782.262490 eV Total energy + Delta-G solvation = -4194.678708 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.168 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -48.81319 -42.34478 -40.59983 -39.54420 -37.86494 -37.36107 -35.84438 -33.40986 -32.40545 -31.95256 -31.93353 -29.67858 -28.02981 -25.43618 -24.60257 -23.95741 -21.94724 -21.78786 -21.36898 -21.03985 -20.70096 -19.09935 -18.38612 -18.24349 -17.50032 -17.27275 -16.78374 -16.52989 -16.37818 -16.24012 -16.00909 -15.60044 -15.48437 -15.31593 -14.78988 -14.64710 -14.62004 -14.27947 -14.17703 -14.11931 -13.98260 -13.81850 -13.68117 -13.42250 -13.19356 -13.00349 -12.79719 -12.66764 -12.22590 -12.18209 -12.08152 -11.84568 -11.57356 -11.26925 -11.12718 -11.00233 -10.82135 -10.80870 -10.20818 -9.81031 -8.98797 -4.85828 1.08945 1.26513 1.58146 1.66176 1.85074 1.89887 2.23435 2.49494 3.17321 3.29979 3.38736 3.41063 3.55083 3.59653 3.65948 3.79428 3.91962 3.99537 4.05079 4.17221 4.22261 4.28444 4.40302 4.42463 4.42959 4.48217 4.54856 4.58610 4.60887 4.63229 4.66768 4.79111 4.82738 4.93672 4.99171 5.00701 5.10515 5.21740 5.24221 5.27779 5.30689 5.32494 5.45464 5.97567 6.11692 6.41649 6.43004 6.65741 6.86864 7.17633 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.061 4.061 3 Si 0.789 3.211 4 C -0.016 4.016 5 C -0.202 4.202 6 C -0.200 4.200 7 C 0.034 3.966 8 C -0.067 4.067 9 C 0.513 3.487 10 O -0.571 6.571 11 N -0.719 5.719 12 C 0.103 3.897 13 C 0.119 3.881 14 F -0.211 7.211 15 C -0.136 4.136 16 C -0.108 4.108 17 C -0.090 4.090 18 H 0.075 0.925 19 C 0.076 3.924 20 O -0.594 6.594 21 C -0.110 4.110 22 C -0.137 4.137 23 N -0.536 5.536 24 H 0.388 0.612 25 H 0.119 0.881 26 H -0.296 1.296 27 H -0.281 1.281 28 H 0.150 0.850 29 H 0.140 0.860 30 H 0.129 0.871 31 H 0.141 0.859 32 H 0.415 0.585 33 H 0.068 0.932 34 H 0.086 0.914 35 H 0.089 0.911 36 H 0.082 0.918 37 H 0.067 0.933 38 H 0.061 0.939 39 H 0.055 0.945 40 H 0.049 0.951 41 H 0.395 0.605 42 H 0.082 0.918 43 H 0.065 0.935 44 H 0.082 0.918 45 H 0.096 0.904 46 H 0.419 0.581 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.641 -4.938 2.657 5.644 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.169 4.169 3 Si 0.693 3.307 4 C -0.130 4.130 5 C -0.226 4.226 6 C -0.225 4.225 7 C -0.080 4.080 8 C -0.107 4.107 9 C 0.300 3.700 10 O -0.449 6.449 11 N -0.372 5.372 12 C -0.022 4.022 13 C 0.100 3.900 14 F -0.192 7.192 15 C -0.173 4.173 16 C -0.146 4.146 17 C -0.108 4.108 18 H 0.093 0.907 19 C -0.001 4.001 20 O -0.403 6.403 21 C -0.148 4.148 22 C -0.175 4.175 23 N -0.132 5.132 24 H 0.237 0.763 25 H 0.137 0.863 26 H -0.224 1.224 27 H -0.207 1.207 28 H 0.167 0.833 29 H 0.158 0.842 30 H 0.147 0.853 31 H 0.159 0.841 32 H 0.252 0.748 33 H 0.086 0.914 34 H 0.104 0.896 35 H 0.108 0.892 36 H 0.101 0.899 37 H 0.085 0.915 38 H 0.080 0.920 39 H 0.073 0.927 40 H 0.067 0.933 41 H 0.245 0.755 42 H 0.100 0.900 43 H 0.084 0.916 44 H 0.101 0.899 45 H 0.115 0.885 46 H 0.257 0.743 Dipole moment (debyes) X Y Z Total from point charges 0.902 -3.629 1.173 3.919 hybrid contribution -1.314 -1.173 1.035 2.043 sum -0.413 -4.801 2.209 5.301 Atomic orbital electron populations 1.86544 1.18489 1.80607 1.50326 1.24929 0.83354 1.12215 0.96422 0.93245 0.90565 0.70325 0.76616 1.20901 1.07281 0.84859 0.99941 1.20909 1.05657 1.00380 0.95700 1.20851 1.06793 0.92651 1.02182 1.19873 1.03159 0.96224 0.88753 1.20229 0.95858 0.90916 1.03740 1.20968 0.88723 0.80920 0.79351 1.90757 1.49918 1.66237 1.38031 1.45801 1.21842 1.18103 1.51475 1.21895 0.87534 0.91829 1.00941 1.21196 0.98362 0.94416 0.75992 1.92845 1.96550 1.96509 1.33311 1.22139 0.98112 0.95407 1.01678 1.21449 0.97316 0.95131 1.00680 1.21193 0.95545 0.93268 1.00829 0.90675 1.22271 0.91634 0.90232 0.95984 1.86418 1.61498 1.28384 1.63980 1.21457 0.98829 0.94156 1.00331 1.22085 0.94919 0.96991 1.03524 1.41883 1.44178 1.09186 1.17908 0.76280 0.86303 1.22355 1.20670 0.83275 0.84219 0.85348 0.84146 0.74806 0.91367 0.89583 0.89205 0.89919 0.91476 0.92037 0.92708 0.93254 0.75494 0.89956 0.91583 0.89898 0.88520 0.74324 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.90 12.88 -148.98 -1.92 -3.82 16 2 C -0.06 -0.10 3.08 71.23 0.22 0.12 16 3 Si 0.79 0.17 30.60 68.60 2.10 2.27 16 4 C -0.02 -0.06 6.50 41.08 0.27 0.20 16 5 C -0.20 -1.02 9.37 22.14 0.21 -0.81 16 6 C -0.20 -1.12 10.77 22.14 0.24 -0.88 16 7 C 0.03 0.10 5.66 41.08 0.23 0.33 16 8 C -0.07 0.26 6.24 29.10 0.18 0.44 16 9 C 0.51 0.92 7.82 87.66 0.69 1.61 16 10 O -0.57 -6.67 16.03 -3.02 -0.05 -6.71 16 11 N -0.72 2.02 5.17 -463.06 -2.40 -0.38 16 12 C 0.10 -0.17 4.85 86.38 0.42 0.25 16 13 C 0.12 -0.42 0.84 -10.79 -0.01 -0.43 16 14 F -0.21 -0.10 15.42 44.97 0.69 0.60 16 15 C -0.14 0.64 4.87 30.60 0.15 0.79 16 16 C -0.11 0.25 4.98 30.59 0.15 0.40 16 17 C -0.09 0.25 2.43 -10.80 -0.03 0.22 16 18 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 19 C 0.08 -0.21 6.43 71.98 0.46 0.26 16 20 O -0.59 0.13 13.19 -148.98 -1.97 -1.84 16 21 C -0.11 0.48 5.08 30.61 0.16 0.63 16 22 C -0.14 0.65 5.00 30.61 0.15 0.80 16 23 N -0.54 -1.44 6.07 -171.12 -1.04 -2.48 16 24 H 0.39 -0.68 8.70 -74.06 -0.64 -1.32 16 25 H 0.12 0.05 7.96 -2.39 -0.02 0.04 16 26 H -0.30 -1.94 7.11 99.48 0.71 -1.23 16 27 H -0.28 -1.15 7.11 99.48 0.71 -0.44 16 28 H 0.15 0.30 6.24 -2.92 -0.02 0.28 16 29 H 0.14 0.52 8.06 -2.91 -0.02 0.50 16 30 H 0.13 -1.22 8.14 -2.39 -0.02 -1.24 16 31 H 0.14 -1.16 8.14 -2.39 -0.02 -1.18 16 32 H 0.41 -3.07 7.46 -92.71 -0.69 -3.76 16 33 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 34 H 0.09 -0.12 8.14 -2.39 -0.02 -0.14 16 35 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 36 H 0.08 -0.53 7.18 -2.39 -0.02 -0.55 16 37 H 0.07 0.00 7.82 -2.39 -0.02 -0.02 16 38 H 0.06 -0.05 7.80 -2.39 -0.02 -0.07 16 39 H 0.05 -0.25 8.14 -2.39 -0.02 -0.27 16 40 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 41 H 0.40 -3.19 9.12 -74.05 -0.68 -3.87 16 42 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 43 H 0.07 -0.17 7.80 -2.39 -0.02 -0.19 16 44 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 45 H 0.10 -0.64 8.14 -2.39 -0.02 -0.66 16 46 H 0.42 -0.38 8.96 -92.71 -0.83 -1.21 16 Total: 0.00 -22.60 374.16 -2.86 -25.47 By element: Atomic # 1 Polarization: -15.24 SS G_CDS: -1.78 Total: -17.02 kcal Atomic # 6 Polarization: 0.44 SS G_CDS: 3.49 Total: 3.92 kcal Atomic # 7 Polarization: 0.58 SS G_CDS: -3.44 Total: -2.86 kcal Atomic # 8 Polarization: -8.44 SS G_CDS: -3.93 Total: -12.37 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.69 Total: 0.60 kcal Atomic # 14 Polarization: 0.17 SS G_CDS: 2.10 Total: 2.27 kcal Total: -22.60 -2.86 -25.47 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_14644196.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.631 kcal (2) G-P(sol) polarization free energy of solvation -22.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.235 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.863 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.466 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.098 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds