Wall clock time and date at job start Tue Mar 9 2021 13:51:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86294 * 109.47230 * 2 1 4 4 C 1.50704 * 109.47018 * 119.99898 * 2 1 3 5 5 C 1.38711 * 120.02840 * 74.99766 * 4 2 1 6 6 O 1.35903 * 120.05550 * 359.97438 * 5 4 2 7 7 C 1.42898 * 117.00058 * 179.72079 * 6 5 4 8 8 C 1.50694 * 109.47227 * 179.97438 * 7 6 5 9 9 O 1.21279 * 120.00202 * 0.02562 * 8 7 6 10 10 N 1.34779 * 120.00067 * 180.02562 * 8 7 6 11 11 C 1.46504 * 119.99794 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.46806 * 180.02562 * 11 10 8 13 13 F 1.39905 * 109.46899 * 304.99441 * 12 11 10 14 14 C 1.53002 * 109.47454 * 64.99922 * 12 11 10 15 15 C 1.53001 * 109.46963 * 180.02562 * 14 12 11 16 16 C 1.53000 * 109.46886 * 299.99499 * 15 14 12 17 17 H 1.09002 * 109.47398 * 300.00496 * 16 15 14 18 18 C 1.52997 * 109.47060 * 180.02562 * 16 15 14 19 19 O 1.42904 * 109.47396 * 64.99895 * 18 16 15 20 20 C 1.53002 * 109.47233 * 60.00670 * 16 15 14 21 21 C 1.52997 * 109.46978 * 185.00001 * 12 11 10 22 22 C 1.38753 * 119.88916 * 179.72073 * 5 4 2 23 23 C 1.38122 * 119.94048 * 0.28390 * 22 5 4 24 24 C 1.38286 * 120.05968 * 0.02562 * 23 22 5 25 25 C 1.38165 * 120.02756 * 255.32130 * 4 2 1 26 26 H 0.96703 * 114.00311 * 300.00078 * 1 2 3 27 27 H 1.08994 * 109.47161 * 239.99595 * 2 1 3 28 28 H 1.48497 * 110.00140 * 178.68179 * 3 2 1 29 29 H 1.48504 * 109.99901 * 299.99912 * 3 2 1 30 30 H 1.09008 * 109.46809 * 60.00130 * 7 6 5 31 31 H 1.09000 * 109.47622 * 300.00167 * 7 6 5 32 32 H 0.96991 * 120.00271 * 0.02562 * 10 8 7 33 33 H 1.08998 * 109.47345 * 60.00275 * 11 10 8 34 34 H 1.09000 * 109.47148 * 299.99463 * 11 10 8 35 35 H 1.09000 * 109.46497 * 300.00109 * 14 12 11 36 36 H 1.09002 * 109.47067 * 59.99861 * 14 12 11 37 37 H 1.09001 * 109.46652 * 179.97438 * 15 14 12 38 38 H 1.08992 * 109.47514 * 59.99933 * 15 14 12 39 39 H 1.09001 * 109.47630 * 185.00216 * 18 16 15 40 40 H 1.09004 * 109.47346 * 305.00346 * 18 16 15 41 41 H 0.96691 * 114.00252 * 179.97438 * 19 18 16 42 42 H 1.09002 * 109.47075 * 59.99068 * 20 16 15 43 43 H 1.08996 * 109.47407 * 180.02562 * 20 16 15 44 44 H 1.09001 * 109.47375 * 59.99908 * 21 12 11 45 45 H 1.09002 * 109.47497 * 299.99550 * 21 12 11 46 46 H 1.07995 * 120.02615 * 180.25295 * 22 5 4 47 47 H 1.08009 * 119.96445 * 179.97438 * 23 22 5 48 48 H 1.08001 * 119.94499 * 179.97438 * 24 23 22 49 49 H 1.07996 * 119.97499 * 359.97438 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.8695 -2.0940 1.3070 6 8 1.3557 -2.8107 0.2730 7 6 1.3291 -4.2320 0.4185 8 6 0.7297 -4.8524 -0.8170 9 8 0.3619 -4.1470 -1.7324 10 7 0.6024 -6.1913 -0.9049 11 6 0.0201 -6.7944 -2.1064 12 6 -0.0096 -8.3161 -1.9499 13 9 1.2781 -8.7803 -1.6607 14 6 -0.9560 -8.6931 -0.8084 15 6 -0.9852 -10.2148 -0.6516 16 6 -1.4763 -10.8522 -1.9529 17 1 -2.4796 -10.4909 -2.1785 18 6 -1.5060 -12.3739 -1.7959 19 8 -2.4762 -12.7322 -0.8098 20 6 -0.5298 -10.4753 -3.0944 21 6 -0.5009 -8.9531 -3.2513 22 6 2.3382 -2.7455 2.4389 23 6 2.8594 -2.0148 3.4888 24 6 2.9140 -0.6351 3.4127 25 6 2.4475 0.0163 2.2861 26 1 -0.3934 0.4417 0.7650 27 1 1.7923 -0.5139 -0.8899 28 1 3.5345 1.7702 0.0321 29 1 1.5614 2.4678 -1.2085 30 1 0.7259 -4.4970 1.2870 31 1 2.3451 -4.6023 0.5552 32 1 0.8961 -6.7555 -0.1727 33 1 0.6235 -6.5298 -2.9747 34 1 -0.9958 -6.4238 -2.2432 35 1 -0.6059 -8.2393 0.1187 36 1 -1.9593 -8.3314 -1.0338 37 1 -1.6591 -10.4833 0.1619 38 1 0.0181 -10.5761 -0.4260 39 1 -1.7702 -12.8324 -2.7489 40 1 -0.5230 -12.7262 -1.4833 41 1 -2.5496 -13.6843 -0.6580 42 1 0.4735 -10.8366 -2.8688 43 1 -0.8799 -10.9290 -4.0216 44 1 0.1733 -8.6845 -4.0645 45 1 -1.5042 -8.5915 -3.4767 46 1 2.2950 -3.8229 2.4992 47 1 3.2239 -2.5215 4.3702 48 1 3.3215 -0.0655 4.2349 49 1 2.4914 1.0939 2.2290 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664722_2989392.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:51:32 Heat of formation + Delta-G solvation = -182.529435 kcal Electronic energy + Delta-G solvation = -31657.357446 eV Core-core repulsion = 27079.356348 eV Total energy + Delta-G solvation = -4578.001099 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.172 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -48.87675 -41.58520 -40.57173 -39.67471 -38.48765 -37.43257 -37.34643 -35.88842 -32.97589 -32.65507 -32.10490 -31.31167 -29.87139 -27.86976 -26.59736 -25.01048 -24.19751 -23.41245 -22.59434 -21.94565 -21.59556 -20.83677 -19.46566 -18.66794 -18.35461 -17.92855 -17.58051 -17.30790 -17.15932 -16.88745 -16.56736 -16.43079 -16.10382 -15.94608 -15.70901 -15.62101 -15.40884 -15.20421 -14.95724 -14.67860 -14.59887 -14.40939 -14.08755 -13.98100 -13.82216 -13.69326 -13.41716 -13.31473 -13.12710 -13.01205 -12.80881 -12.39021 -12.32126 -12.22299 -12.19256 -11.95750 -11.68963 -11.66852 -11.36345 -11.24535 -10.94822 -10.89805 -10.28116 -10.23342 -9.99946 -9.21764 -4.95911 0.20497 0.39416 1.39520 1.40732 1.48386 1.73535 2.08759 2.51569 2.67389 3.01562 3.14735 3.25885 3.38668 3.45724 3.46494 3.60353 3.76309 3.78490 3.81585 3.87117 3.88901 3.89623 4.01937 4.06748 4.14285 4.25048 4.25981 4.27983 4.32925 4.40237 4.46973 4.48228 4.50432 4.55208 4.68271 4.68683 4.79395 4.81396 4.87001 4.95789 4.96550 5.06361 5.16937 5.21514 5.24855 5.30725 5.33114 5.46647 5.67323 6.18238 6.34850 6.60330 6.78598 7.05743 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.057 4.057 3 Si 0.682 3.318 4 C -0.149 4.149 5 C 0.151 3.849 6 O -0.278 6.278 7 C 0.040 3.960 8 C 0.517 3.483 9 O -0.507 6.507 10 N -0.726 5.726 11 C 0.103 3.897 12 C 0.113 3.887 13 F -0.201 7.201 14 C -0.139 4.139 15 C -0.112 4.112 16 C -0.090 4.090 17 H 0.080 0.920 18 C 0.079 3.921 19 O -0.574 6.574 20 C -0.114 4.114 21 C -0.135 4.135 22 C -0.212 4.212 23 C -0.073 4.073 24 C -0.151 4.151 25 C -0.075 4.075 26 H 0.373 0.627 27 H 0.114 0.886 28 H -0.257 1.257 29 H -0.254 1.254 30 H 0.095 0.905 31 H 0.094 0.906 32 H 0.404 0.596 33 H 0.082 0.918 34 H 0.090 0.910 35 H 0.074 0.926 36 H 0.085 0.915 37 H 0.078 0.922 38 H 0.067 0.933 39 H 0.047 0.953 40 H 0.046 0.954 41 H 0.381 0.619 42 H 0.072 0.928 43 H 0.074 0.926 44 H 0.082 0.918 45 H 0.087 0.913 46 H 0.129 0.871 47 H 0.129 0.871 48 H 0.130 0.870 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.241 -3.888 4.833 6.207 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.168 4.168 3 Si 0.584 3.416 4 C -0.150 4.150 5 C 0.105 3.895 6 O -0.190 6.190 7 C -0.039 4.039 8 C 0.301 3.699 9 O -0.380 6.380 10 N -0.381 5.381 11 C -0.021 4.021 12 C 0.094 3.906 13 F -0.181 7.181 14 C -0.177 4.177 15 C -0.149 4.149 16 C -0.108 4.108 17 H 0.099 0.901 18 C 0.001 3.999 19 O -0.379 6.379 20 C -0.152 4.152 21 C -0.173 4.173 22 C -0.231 4.231 23 C -0.091 4.091 24 C -0.169 4.169 25 C -0.092 4.092 26 H 0.219 0.781 27 H 0.131 0.869 28 H -0.182 1.182 29 H -0.179 1.179 30 H 0.113 0.887 31 H 0.112 0.888 32 H 0.239 0.761 33 H 0.101 0.899 34 H 0.108 0.892 35 H 0.093 0.907 36 H 0.104 0.896 37 H 0.096 0.904 38 H 0.086 0.914 39 H 0.065 0.935 40 H 0.065 0.935 41 H 0.228 0.772 42 H 0.091 0.909 43 H 0.092 0.908 44 H 0.101 0.899 45 H 0.106 0.894 46 H 0.147 0.853 47 H 0.147 0.853 48 H 0.148 0.852 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 0.421 -2.359 2.989 3.831 hybrid contribution 0.585 -1.891 0.364 2.013 sum 1.006 -4.250 3.353 5.506 Atomic orbital electron populations 1.86603 1.16943 1.81487 1.48570 1.24938 0.85373 1.09261 0.97221 0.95244 0.81033 0.77856 0.87464 1.19736 1.05712 0.91070 0.98517 1.18803 0.93129 0.90853 0.86729 1.86233 1.77322 1.16742 1.38673 1.22442 1.02537 0.81430 0.97482 1.19996 0.79299 0.82182 0.88379 1.90810 1.47057 1.60956 1.39170 1.45653 1.65103 1.06440 1.20904 1.21977 1.00875 0.90814 0.88453 1.21207 0.79710 0.92253 0.97400 1.92867 1.40396 1.90094 1.94784 1.22163 1.00012 0.97897 0.97641 1.21509 1.02243 0.93328 0.97835 1.21190 1.00247 0.93910 0.95470 0.90130 1.22205 0.91367 0.95268 0.91017 1.86459 1.61282 1.29133 1.61070 1.21498 1.00396 0.94827 0.98468 1.22048 1.03322 0.96262 0.95717 1.21302 1.06383 1.00460 0.94942 1.21025 0.96303 0.94103 0.97657 1.21078 1.02648 0.94568 0.98655 1.20860 0.96756 0.99110 0.92505 0.78067 0.86911 1.18194 1.17886 0.88709 0.88808 0.76064 0.89926 0.89230 0.90718 0.89603 0.90373 0.91383 0.93505 0.93527 0.77176 0.90882 0.90764 0.89946 0.89428 0.85278 0.85328 0.85168 0.84674 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.77 12.88 -35.23 -0.45 -2.23 16 2 C -0.06 -0.15 2.38 36.01 0.09 -0.07 16 3 Si 0.68 0.38 29.92 -169.99 -5.09 -4.71 16 4 C -0.15 -0.30 5.27 -104.47 -0.55 -0.85 16 5 C 0.15 0.38 6.66 -39.22 -0.26 0.12 16 6 O -0.28 -1.10 9.00 -39.35 -0.35 -1.46 16 7 C 0.04 0.01 5.22 36.00 0.19 0.19 16 8 C 0.52 1.23 7.91 -10.99 -0.09 1.14 16 9 O -0.51 -3.75 16.50 -14.35 -0.24 -3.98 16 10 N -0.73 0.44 5.17 -60.29 -0.31 0.12 16 11 C 0.10 -0.05 4.85 -4.04 -0.02 -0.07 16 12 C 0.11 -0.17 0.84 -90.62 -0.08 -0.25 16 13 F -0.20 -0.08 15.42 2.25 0.03 -0.04 16 14 C -0.14 0.28 4.87 -26.73 -0.13 0.15 16 15 C -0.11 0.12 4.98 -26.73 -0.13 -0.01 16 16 C -0.09 0.11 2.43 -90.62 -0.22 -0.11 16 17 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 18 C 0.08 -0.10 6.43 37.16 0.24 0.14 16 19 O -0.57 0.04 13.20 -35.23 -0.46 -0.42 16 20 C -0.11 0.22 5.08 -26.70 -0.14 0.09 16 21 C -0.14 0.29 5.00 -26.70 -0.13 0.15 16 22 C -0.21 -0.05 9.04 -39.43 -0.36 -0.41 16 23 C -0.07 0.04 10.04 -39.61 -0.40 -0.36 16 24 C -0.15 0.10 10.04 -39.56 -0.40 -0.29 16 25 C -0.07 0.01 8.66 -39.61 -0.34 -0.33 16 26 H 0.37 -0.47 8.70 45.56 0.40 -0.07 16 27 H 0.11 0.53 7.83 -51.93 -0.41 0.13 16 28 H -0.26 -0.71 7.11 56.52 0.40 -0.31 16 29 H -0.25 -0.99 7.11 56.52 0.40 -0.59 16 30 H 0.10 -0.23 7.66 -51.92 -0.40 -0.63 16 31 H 0.09 -0.21 7.66 -51.93 -0.40 -0.61 16 32 H 0.40 -1.21 7.46 -40.82 -0.30 -1.51 16 33 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 35 H 0.07 -0.20 7.18 -51.93 -0.37 -0.57 16 36 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 37 H 0.08 -0.01 7.82 -51.93 -0.41 -0.41 16 38 H 0.07 -0.03 7.80 -51.93 -0.41 -0.44 16 39 H 0.05 -0.09 8.14 -51.93 -0.42 -0.52 16 40 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 41 H 0.38 -1.52 9.12 45.56 0.42 -1.11 16 42 H 0.07 -0.09 7.80 -51.93 -0.41 -0.50 16 43 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 44 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 45 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 46 H 0.13 -0.28 6.30 -52.49 -0.33 -0.61 16 47 H 0.13 -0.35 8.06 -52.48 -0.42 -0.77 16 48 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 49 H 0.14 -0.36 5.14 -52.49 -0.27 -0.63 16 LS Contribution 395.86 15.07 5.97 5.97 Total: 0.00 -11.41 395.86 -10.37 -21.78 By element: Atomic # 1 Polarization: -7.54 SS G_CDS: -6.73 Total: -14.27 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -2.73 Total: -0.75 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.31 Total: 0.12 kcal Atomic # 8 Polarization: -6.58 SS G_CDS: -1.51 Total: -8.09 kcal Atomic # 9 Polarization: -0.08 SS G_CDS: 0.03 Total: -0.04 kcal Atomic # 14 Polarization: 0.38 SS G_CDS: -5.09 Total: -4.71 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -11.41 -10.37 -21.78 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_2989392.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -160.753 kcal (2) G-P(sol) polarization free energy of solvation -11.407 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -172.160 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.370 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.776 kcal (6) G-S(sol) free energy of system = (1) + (5) -182.529 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds