Wall clock time and date at job start Tue Mar 9 2021 13:52:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37641 * 125.67156 * 2 1 4 4 C 1.46665 * 126.23072 * 0.02562 * 3 2 1 5 5 O 1.21701 * 119.99753 * 353.98053 * 4 3 2 6 6 N 1.34777 * 120.00379 * 173.98134 * 4 3 2 7 7 C 1.46501 * 120.00124 * 185.11940 * 6 4 3 8 8 C 1.53000 * 109.47234 * 179.97438 * 7 6 4 9 9 F 1.39901 * 109.46972 * 59.99487 * 8 7 6 10 10 C 1.52991 * 109.47355 * 179.97438 * 8 7 6 11 11 C 1.53000 * 109.47355 * 179.97438 * 10 8 7 12 12 C 1.53003 * 109.47110 * 300.00017 * 11 10 8 13 13 H 1.08994 * 109.47113 * 299.99815 * 12 11 10 14 14 C 1.52996 * 109.47289 * 179.97438 * 12 11 10 15 15 O 1.42899 * 109.47584 * 175.00367 * 14 12 11 16 16 C 1.53001 * 109.46689 * 59.99930 * 12 11 10 17 17 C 1.53000 * 109.47393 * 299.99494 * 16 12 11 18 18 C 1.37891 * 107.54760 * 179.74831 * 3 2 1 19 19 C 1.39888 * 107.08791 * 0.22737 * 18 3 2 20 20 Br 1.89095 * 126.06965 * 180.02562 * 19 18 3 21 21 C 1.35502 * 107.85507 * 359.97438 * 19 18 3 22 22 C 1.50696 * 125.57202 * 180.02562 * 21 19 18 23 23 O 1.42894 * 109.47235 * 124.75171 * 22 21 19 24 24 Si 1.86298 * 109.46972 * 244.75310 * 22 21 19 25 25 H 1.08995 * 109.47343 * 94.03493 * 1 2 3 26 26 H 1.08995 * 109.47412 * 214.03910 * 1 2 3 27 27 H 1.09004 * 109.47151 * 334.03925 * 1 2 3 28 28 H 0.97004 * 119.99895 * 5.11246 * 6 4 3 29 29 H 1.08997 * 109.47055 * 300.00049 * 7 6 4 30 30 H 1.09002 * 109.47197 * 60.00047 * 7 6 4 31 31 H 1.09000 * 109.47615 * 300.00317 * 10 8 7 32 32 H 1.09002 * 109.47012 * 60.00300 * 10 8 7 33 33 H 1.08994 * 109.46982 * 59.99913 * 11 10 8 34 34 H 1.08997 * 109.47426 * 180.02562 * 11 10 8 35 35 H 1.09005 * 109.47172 * 295.00752 * 14 12 11 36 36 H 1.09003 * 109.47243 * 55.00095 * 14 12 11 37 37 H 0.96695 * 114.00397 * 180.02562 * 15 14 12 38 38 H 1.08999 * 109.47400 * 60.00560 * 16 12 11 39 39 H 1.09005 * 109.46613 * 179.97438 * 16 12 11 40 40 H 1.08994 * 109.47311 * 300.00667 * 17 16 12 41 41 H 1.08999 * 109.46903 * 179.97438 * 17 16 12 42 42 H 1.07991 * 126.45924 * 180.18739 * 18 3 2 43 43 H 1.08996 * 109.47145 * 4.75037 * 22 21 19 44 44 H 0.96706 * 114.00401 * 179.97438 * 23 22 21 45 45 H 1.48499 * 110.00131 * 294.74136 * 24 22 21 46 46 H 1.48495 * 110.00136 * 56.06802 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2676 1.1182 0.0000 4 6 1.8120 2.5123 0.0005 5 8 0.6267 2.7650 -0.1095 6 7 2.7060 3.5134 0.1228 7 6 2.2434 4.8988 0.2362 8 6 3.4502 5.8308 0.3630 9 9 4.2607 5.7009 -0.7698 10 6 2.9671 7.2776 0.4808 11 6 4.1738 8.2095 0.6083 12 6 4.9765 7.8367 1.8563 13 1 4.3445 7.9380 2.7385 14 6 6.1836 8.7681 1.9835 15 8 6.8676 8.4970 3.2085 16 6 5.4596 6.3897 1.7385 17 6 4.2529 5.4578 1.6111 18 6 3.5781 0.6892 0.0058 19 6 3.5528 -0.7094 0.0040 20 35 5.0609 -1.8502 0.0105 21 6 2.2558 -1.1015 -0.0022 22 6 1.7713 -2.5285 -0.0055 23 8 0.8861 -2.7335 1.0973 24 14 0.8695 -2.8743 -1.5985 25 1 -0.3634 -0.0723 -1.0251 26 1 -0.3634 -0.8515 0.5752 27 1 -0.3634 0.9240 0.4499 28 1 3.6558 3.3166 0.1359 29 1 1.6705 5.1644 -0.6522 30 1 1.6123 5.0000 1.1192 31 1 2.3948 7.5432 -0.4081 32 1 2.3354 7.3791 1.3633 33 1 4.8059 8.1081 -0.2739 34 1 3.8297 9.2403 0.6926 35 1 6.8603 8.6024 1.1451 36 1 5.8452 9.8042 1.9779 37 1 7.6453 9.0523 3.3560 38 1 6.0918 6.2884 0.8563 39 1 6.0319 6.1243 2.6274 40 1 3.6208 5.5592 2.4933 41 1 4.5971 4.4271 1.5267 42 1 4.4582 1.3151 0.0102 43 1 2.6239 -3.2018 0.0829 44 1 0.5343 -3.6323 1.1576 45 1 -0.3651 -2.0523 -1.6720 46 1 1.7496 -2.5737 -2.7561 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664722_5000100.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:52:31 Heat of formation + Delta-G solvation = -122.272914 kcal Electronic energy + Delta-G solvation = -30916.454439 eV Core-core repulsion = 26382.730678 eV Total energy + Delta-G solvation = -4533.723761 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 405.078 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -48.84078 -42.83545 -40.42014 -39.60552 -37.84662 -37.44286 -36.04078 -34.43315 -33.05058 -32.11552 -31.96659 -30.96581 -28.74162 -27.36610 -26.71180 -24.86979 -24.16495 -23.00128 -21.94511 -21.48991 -20.85417 -20.41633 -19.05814 -18.62278 -18.33257 -17.49358 -17.28010 -17.07242 -16.94150 -16.40107 -16.20629 -16.06182 -15.74715 -15.65475 -15.45045 -15.06995 -14.64140 -14.57932 -14.42518 -14.38541 -14.32829 -14.19300 -13.89251 -13.78807 -13.66359 -13.32897 -13.21914 -13.10975 -12.82247 -12.79517 -12.31261 -12.20369 -12.05516 -11.85568 -11.66654 -11.38064 -11.27731 -11.21453 -11.01938 -10.91487 -10.71185 -10.32008 -9.78021 -9.26740 -5.19056 0.15971 0.64925 0.92241 1.25733 1.41417 1.53089 1.84902 2.18294 2.18506 3.01940 3.03148 3.15723 3.28288 3.39846 3.47573 3.50515 3.57259 3.77533 3.82615 3.90474 4.01383 4.07982 4.16306 4.20408 4.26766 4.29129 4.29358 4.40242 4.42999 4.48968 4.49521 4.53234 4.62262 4.68445 4.71135 4.81226 4.82783 4.89108 4.98886 5.09172 5.15198 5.24219 5.26691 5.35508 5.60964 5.82337 6.25508 6.38040 6.62673 6.99140 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.054 3.946 2 N -0.386 5.386 3 C -0.033 4.033 4 C 0.595 3.405 5 O -0.539 6.539 6 N -0.714 5.714 7 C 0.103 3.897 8 C 0.112 3.888 9 F -0.200 7.200 10 C -0.135 4.135 11 C -0.114 4.114 12 C -0.089 4.089 13 H 0.080 0.920 14 C 0.079 3.921 15 O -0.574 6.574 16 C -0.112 4.112 17 C -0.140 4.140 18 C -0.110 4.110 19 C -0.159 4.159 20 Br -0.015 7.015 21 C 0.092 3.908 22 C -0.052 4.052 23 O -0.545 6.545 24 Si 0.686 3.314 25 H 0.078 0.922 26 H 0.101 0.899 27 H 0.110 0.890 28 H 0.407 0.593 29 H 0.085 0.915 30 H 0.090 0.910 31 H 0.082 0.918 32 H 0.087 0.913 33 H 0.073 0.927 34 H 0.074 0.926 35 H 0.047 0.953 36 H 0.046 0.954 37 H 0.381 0.619 38 H 0.068 0.932 39 H 0.078 0.922 40 H 0.085 0.915 41 H 0.075 0.925 42 H 0.158 0.842 43 H 0.097 0.903 44 H 0.390 0.610 45 H -0.246 1.246 46 H -0.249 1.249 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.293 -0.619 0.617 0.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.059 5.059 3 C -0.148 4.148 4 C 0.382 3.618 5 O -0.417 6.417 6 N -0.367 5.367 7 C -0.021 4.021 8 C 0.094 3.906 9 F -0.180 7.180 10 C -0.173 4.173 11 C -0.152 4.152 12 C -0.108 4.108 13 H 0.098 0.902 14 C 0.001 3.999 15 O -0.379 6.379 16 C -0.149 4.149 17 C -0.178 4.178 18 C -0.137 4.137 19 C -0.245 4.245 20 Br 0.069 6.931 21 C -0.028 4.028 22 C -0.162 4.162 23 O -0.352 6.352 24 Si 0.584 3.416 25 H 0.097 0.903 26 H 0.120 0.880 27 H 0.128 0.872 28 H 0.243 0.757 29 H 0.103 0.897 30 H 0.108 0.892 31 H 0.101 0.899 32 H 0.105 0.895 33 H 0.092 0.908 34 H 0.092 0.908 35 H 0.065 0.935 36 H 0.065 0.935 37 H 0.228 0.772 38 H 0.087 0.913 39 H 0.097 0.903 40 H 0.104 0.896 41 H 0.093 0.907 42 H 0.175 0.825 43 H 0.115 0.885 44 H 0.239 0.761 45 H -0.170 1.170 46 H -0.173 1.173 Dipole moment (debyes) X Y Z Total from point charges -1.051 -0.284 -0.064 1.091 hybrid contribution 1.022 0.932 0.124 1.389 sum -0.029 0.648 0.060 0.651 Atomic orbital electron populations 1.22647 0.74815 1.06894 1.04258 1.43764 1.07331 1.03850 1.50942 1.19980 0.89811 0.87777 1.17247 1.16767 0.85528 0.83149 0.76339 1.90827 1.16212 1.84609 1.50098 1.45484 1.10221 1.05920 1.75059 1.22002 0.96026 0.79675 1.04354 1.21196 0.89073 0.96519 0.83824 1.92879 1.74930 1.96971 1.53246 1.22026 0.98902 0.92020 1.04315 1.21489 0.96319 0.99315 0.98081 1.21188 0.95879 0.94985 0.98740 0.90155 1.22204 0.93668 0.97687 0.86298 1.86460 1.45941 1.64881 1.40640 1.21512 0.96902 0.93303 1.03212 1.22162 0.98183 1.00638 0.96798 1.21225 0.95189 0.92986 1.04268 1.20756 0.91073 0.94443 1.18240 1.96669 1.35472 1.62812 1.98157 1.19556 0.88993 0.87921 1.06374 1.24345 0.98915 0.91569 1.01374 1.86438 1.64115 1.36346 1.48316 0.95679 0.80573 0.90408 0.74949 0.90337 0.88020 0.87155 0.75706 0.89711 0.89198 0.89937 0.89475 0.90848 0.90771 0.93503 0.93533 0.77182 0.91319 0.90319 0.89598 0.90676 0.82471 0.88474 0.76145 1.16986 1.17345 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.12 8.86 59.85 0.53 0.65 16 2 N -0.39 -1.36 3.12 -115.60 -0.36 -1.72 16 3 C -0.03 -0.11 6.88 -81.98 -0.56 -0.67 16 4 C 0.59 1.99 7.76 -12.86 -0.10 1.89 16 5 O -0.54 -3.19 14.67 5.19 0.08 -3.12 16 6 N -0.71 -0.41 5.17 -61.62 -0.32 -0.73 16 7 C 0.10 -0.03 4.88 -4.04 -0.02 -0.05 16 8 C 0.11 -0.13 0.85 -90.62 -0.08 -0.20 16 9 F -0.20 -0.21 15.63 2.25 0.04 -0.18 16 10 C -0.13 0.27 5.00 -26.74 -0.13 0.14 16 11 C -0.11 0.20 5.08 -26.73 -0.14 0.07 16 12 C -0.09 0.09 2.43 -90.62 -0.22 -0.13 16 13 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 14 C 0.08 -0.08 6.43 37.16 0.24 0.16 16 15 O -0.57 -0.12 13.19 -35.23 -0.46 -0.58 16 16 C -0.11 0.07 4.98 -26.73 -0.13 -0.06 16 17 C -0.14 0.21 4.83 -26.73 -0.13 0.08 16 18 C -0.11 -0.23 10.34 -39.09 -0.40 -0.64 16 19 C -0.16 -0.47 6.53 -39.94 -0.26 -0.73 16 20 Br -0.02 -0.03 33.06 -68.01 -2.25 -2.28 16 21 C 0.09 0.27 5.14 -81.91 -0.42 -0.15 16 22 C -0.05 0.00 2.78 36.00 0.10 0.10 16 23 O -0.55 0.44 11.29 -35.23 -0.40 0.04 16 24 Si 0.69 -0.68 31.52 -169.99 -5.36 -6.04 16 25 H 0.08 0.17 7.08 -51.93 -0.37 -0.20 16 26 H 0.10 0.11 6.37 -51.93 -0.33 -0.22 16 27 H 0.11 0.33 6.23 -51.93 -0.32 0.01 16 28 H 0.41 -0.41 6.17 -40.82 -0.25 -0.66 16 29 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 30 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 32 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.07 -0.07 7.80 -51.93 -0.41 -0.48 16 34 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 35 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 37 H 0.38 -1.42 9.12 45.56 0.42 -1.00 16 38 H 0.07 0.00 7.80 -51.93 -0.41 -0.40 16 39 H 0.08 0.03 7.82 -51.93 -0.41 -0.38 16 40 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 41 H 0.07 -0.14 6.86 -51.93 -0.36 -0.50 16 42 H 0.16 -0.08 7.45 -52.49 -0.39 -0.47 16 43 H 0.10 -0.10 6.96 -51.93 -0.36 -0.46 16 44 H 0.39 -2.31 8.74 45.56 0.40 -1.91 16 45 H -0.25 -0.26 5.95 56.52 0.34 0.07 16 46 H -0.25 -0.61 7.11 56.52 0.40 -0.21 16 LS Contribution 385.15 15.07 5.80 5.80 Total: 0.00 -9.13 385.15 -10.82 -19.95 By element: Atomic # 1 Polarization: -5.75 SS G_CDS: -5.85 Total: -11.60 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -1.73 Total: 0.46 kcal Atomic # 7 Polarization: -1.77 SS G_CDS: -0.68 Total: -2.45 kcal Atomic # 8 Polarization: -2.88 SS G_CDS: -0.79 Total: -3.66 kcal Atomic # 9 Polarization: -0.21 SS G_CDS: 0.04 Total: -0.18 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.36 Total: -6.04 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -2.25 Total: -2.28 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -9.13 -10.82 -19.95 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664722_5000100.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.328 kcal (2) G-P(sol) polarization free energy of solvation -9.130 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.457 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.816 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.945 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.273 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds