Wall clock time and date at job start Tue Mar 9 2021 13:54:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52992 * 109.47378 * 2 1 4 4 C 1.53002 * 109.47245 * 239.99374 * 2 1 3 5 5 C 1.53004 * 109.46495 * 119.99619 * 2 1 3 6 6 C 1.52972 * 109.43692 * 60.00363 * 5 2 1 7 7 C 1.53124 * 109.44482 * 181.63856 * 6 5 2 8 8 C 1.52844 * 109.21934 * 301.98681 * 7 6 5 9 9 C 1.53482 * 113.40546 * 285.94052 * 8 7 6 10 10 C 1.53536 * 83.17510 * 271.20415 * 9 8 7 11 11 N 1.46758 * 113.45969 * 187.28296 * 8 7 6 12 12 C 1.34776 * 136.09600 * 267.96511 * 11 8 7 13 13 O 1.21572 * 119.99895 * 359.25929 * 12 11 8 14 14 C 1.47699 * 119.99924 * 179.26383 * 12 11 8 15 15 C 1.39802 * 120.15232 * 172.45260 * 14 12 11 16 16 F 1.35096 * 120.08614 * 359.97294 * 15 14 12 17 17 C 1.38315 * 119.82826 * 180.02562 * 15 14 12 18 18 C 1.38180 * 120.14805 * 359.97438 * 17 15 14 19 19 C 1.50697 * 119.84462 * 180.02562 * 18 17 15 20 20 O 1.42902 * 109.46926 * 254.97594 * 19 18 17 21 21 Si 1.86303 * 109.47232 * 14.97632 * 19 18 17 22 22 C 1.38660 * 120.31363 * 359.97438 * 18 17 15 23 23 F 1.35097 * 119.91803 * 180.02562 * 22 18 17 24 24 C 1.38068 * 120.16418 * 0.30027 * 22 18 17 25 25 C 1.52841 * 112.67916 * 56.60256 * 8 7 6 26 26 C 1.52968 * 109.39584 * 180.19535 * 5 2 1 27 27 H 1.08992 * 109.47294 * 300.00743 * 1 2 3 28 28 H 1.09004 * 109.46586 * 60.00333 * 1 2 3 29 29 H 1.08999 * 109.47488 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.47216 * 179.97438 * 3 2 1 31 31 H 1.09004 * 109.46990 * 299.99419 * 3 2 1 32 32 H 1.08992 * 109.47515 * 59.99393 * 3 2 1 33 33 H 1.08999 * 109.47089 * 300.00503 * 4 2 1 34 34 H 1.08993 * 109.46814 * 60.00209 * 4 2 1 35 35 H 1.08994 * 109.47031 * 180.02562 * 4 2 1 36 36 H 1.08997 * 109.43849 * 300.08396 * 5 2 1 37 37 H 1.09001 * 109.48095 * 61.64108 * 6 5 2 38 38 H 1.09003 * 109.47586 * 301.63083 * 6 5 2 39 39 H 1.09005 * 109.51244 * 182.06738 * 7 6 5 40 40 H 1.08992 * 109.55301 * 61.93885 * 7 6 5 41 41 H 1.09007 * 114.40651 * 157.66081 * 9 8 7 42 42 H 1.09003 * 114.28380 * 24.73876 * 9 8 7 43 43 H 1.09000 * 113.45689 * 219.20954 * 10 9 8 44 44 H 1.08998 * 113.46209 * 88.80313 * 10 9 8 45 45 H 1.08002 * 119.92544 * 180.02562 * 17 15 14 46 46 H 1.09004 * 109.47374 * 134.97849 * 19 18 17 47 47 H 0.96697 * 114.00211 * 60.00253 * 20 19 18 48 48 H 1.48493 * 109.99857 * 180.02562 * 21 19 18 49 49 H 1.48498 * 109.99648 * 301.31884 * 21 19 18 50 50 H 1.08001 * 120.07200 * 179.72193 * 24 22 18 51 51 H 1.09001 * 109.51520 * 63.32105 * 25 8 7 52 52 H 1.09001 * 109.51560 * 183.47655 * 25 8 7 53 53 H 1.09007 * 109.47732 * 298.32920 * 26 5 2 54 54 H 1.08997 * 109.47686 * 58.34488 * 26 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7214 -1.2492 5 6 2.0399 -0.7212 1.2494 6 6 1.5295 -2.1633 1.2486 7 6 2.0057 -2.8732 2.5190 8 6 3.5322 -2.8264 2.5794 9 6 4.2112 -3.7846 1.5912 10 6 4.0935 -4.7775 2.7563 11 7 4.0985 -3.6260 3.6720 12 6 4.4586 -3.4046 4.9518 13 8 4.3400 -2.2946 5.4332 14 6 4.9973 -4.5105 5.7693 15 6 5.5178 -4.2545 7.0413 16 9 5.5302 -2.9939 7.5268 17 6 6.0211 -5.2951 7.8009 18 6 6.0095 -6.5849 7.3053 19 6 6.5591 -7.7136 8.1390 20 8 7.8340 -8.1068 7.6272 21 14 6.7461 -7.1479 9.9042 22 6 5.4937 -6.8458 6.0449 23 9 5.4860 -8.1099 5.5684 24 6 4.9933 -5.8160 5.2733 25 6 4.0809 -1.4011 2.5206 26 6 3.5695 -0.7160 1.2502 27 1 -0.3633 0.5139 0.8898 28 1 -0.3632 0.5138 -0.8901 29 1 -0.3634 -1.0276 0.0005 30 1 3.1301 1.4424 0.0005 31 1 1.6768 1.9562 -0.8901 32 1 1.6767 1.9563 0.8898 33 1 1.6767 -1.7490 -1.2491 34 1 1.6768 -0.2076 -2.1391 35 1 3.1300 -0.7218 -1.2489 36 1 1.6750 -0.2078 2.1389 37 1 1.9167 -2.6854 0.3736 38 1 0.4399 -2.1632 1.2190 39 1 1.6737 -3.9113 2.5022 40 1 1.5911 -2.3725 3.3938 41 1 5.2359 -3.5154 1.3347 42 1 3.6024 -4.0391 0.7235 43 1 4.9650 -5.4229 2.8661 44 1 3.1549 -5.3317 2.7611 45 1 6.4232 -5.0992 8.7839 46 1 5.8747 -8.5611 8.0996 47 1 8.4946 -7.4007 7.6320 48 1 7.2878 -8.2518 10.7365 49 1 7.6519 -5.9729 9.9676 50 1 4.5960 -6.0202 4.2900 51 1 3.7436 -0.8447 3.3952 52 1 5.1704 -1.4307 2.5049 53 1 3.9353 -1.2534 0.3752 54 1 3.9295 0.3124 1.2219 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17760998_12360598.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:54:31 Heat of formation + Delta-G solvation = -85.711060 kcal Electronic energy + Delta-G solvation = -36964.122737 eV Core-core repulsion = 32118.929028 eV Total energy + Delta-G solvation = -4845.193709 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.195 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -50.16860 -50.13293 -42.50794 -40.76722 -39.81887 -38.90834 -37.79141 -35.28553 -33.53029 -32.13542 -31.44373 -30.78080 -29.16226 -28.16670 -28.09803 -27.68539 -25.06552 -24.35955 -24.07846 -23.42289 -22.75443 -21.73195 -19.97585 -19.23599 -18.99999 -18.66428 -18.48932 -17.80413 -17.50508 -17.27583 -16.95022 -16.79359 -16.58133 -16.12190 -16.08496 -15.94188 -15.61666 -15.47908 -15.26588 -15.15787 -14.97921 -14.81025 -14.63977 -14.48140 -14.21999 -14.11362 -13.88215 -13.56221 -13.41132 -13.26840 -13.16953 -12.96816 -12.74987 -12.68468 -12.58804 -12.56522 -12.46599 -12.42523 -12.08735 -11.96141 -11.94042 -11.65622 -11.32938 -11.24425 -10.99279 -10.89094 -10.79765 -10.74802 -10.62222 -9.95825 -9.72246 -4.98056 -0.84798 -0.35966 1.13467 1.34473 1.51653 1.53950 1.88400 2.18973 2.73332 2.76453 3.01963 3.19343 3.19970 3.33786 3.45717 3.62956 3.65889 3.72054 3.75645 3.92946 3.94149 4.01094 4.06061 4.25516 4.27951 4.28800 4.33495 4.35572 4.36684 4.41398 4.48006 4.50141 4.54535 4.57773 4.64257 4.69082 4.72774 4.80898 4.82543 4.88305 4.90735 4.94755 4.96154 5.01100 5.11993 5.15008 5.16121 5.18292 5.20622 5.24839 5.28151 5.34461 5.36904 5.43447 5.49408 5.62286 5.68904 6.36268 6.53130 6.87767 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.061 4.061 3 C -0.147 4.147 4 C -0.144 4.144 5 C -0.074 4.074 6 C -0.107 4.107 7 C -0.111 4.111 8 C 0.159 3.841 9 C -0.131 4.131 10 C 0.079 3.921 11 N -0.637 5.637 12 C 0.577 3.423 13 O -0.566 6.566 14 C -0.144 4.144 15 C 0.136 3.864 16 F -0.126 7.126 17 C -0.129 4.129 18 C -0.091 4.091 19 C -0.086 4.086 20 O -0.539 6.539 21 Si 0.771 3.229 22 C 0.106 3.894 23 F -0.125 7.125 24 C -0.093 4.093 25 C -0.111 4.111 26 C -0.105 4.105 27 H 0.044 0.956 28 H 0.053 0.947 29 H 0.066 0.934 30 H 0.058 0.942 31 H 0.054 0.946 32 H 0.044 0.956 33 H 0.069 0.931 34 H 0.050 0.950 35 H 0.061 0.939 36 H 0.047 0.953 37 H 0.091 0.909 38 H 0.075 0.925 39 H 0.089 0.911 40 H 0.042 0.958 41 H 0.099 0.901 42 H 0.123 0.877 43 H 0.101 0.899 44 H 0.118 0.882 45 H 0.172 0.828 46 H 0.134 0.866 47 H 0.390 0.610 48 H -0.291 1.291 49 H -0.272 1.272 50 H 0.184 0.816 51 H 0.038 0.962 52 H 0.054 0.946 53 H 0.086 0.914 54 H 0.061 0.939 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.316 -4.257 -4.962 6.937 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.061 4.061 3 C -0.204 4.204 4 C -0.201 4.201 5 C -0.092 4.092 6 C -0.144 4.144 7 C -0.149 4.149 8 C 0.076 3.924 9 C -0.168 4.168 10 C -0.042 4.042 11 N -0.370 5.370 12 C 0.367 3.633 13 O -0.446 6.446 14 C -0.148 4.148 15 C 0.115 3.885 16 F -0.104 7.104 17 C -0.147 4.147 18 C -0.093 4.093 19 C -0.194 4.194 20 O -0.347 6.347 21 Si 0.674 3.326 22 C 0.087 3.913 23 F -0.103 7.103 24 C -0.112 4.112 25 C -0.150 4.150 26 C -0.143 4.143 27 H 0.063 0.937 28 H 0.072 0.928 29 H 0.085 0.915 30 H 0.077 0.923 31 H 0.073 0.927 32 H 0.063 0.937 33 H 0.088 0.912 34 H 0.069 0.931 35 H 0.080 0.920 36 H 0.066 0.934 37 H 0.109 0.891 38 H 0.094 0.906 39 H 0.108 0.892 40 H 0.061 0.939 41 H 0.117 0.883 42 H 0.141 0.859 43 H 0.119 0.881 44 H 0.136 0.864 45 H 0.189 0.811 46 H 0.152 0.848 47 H 0.240 0.760 48 H -0.218 1.218 49 H -0.198 1.198 50 H 0.201 0.799 51 H 0.057 0.943 52 H 0.073 0.927 53 H 0.104 0.896 54 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -2.071 -4.064 -3.912 6.010 hybrid contribution 1.016 0.732 -0.036 1.253 sum -1.056 -3.332 -3.948 5.273 Atomic orbital electron populations 1.21946 0.94694 1.02280 1.01278 1.20500 0.95385 0.94933 0.95261 1.21962 1.01260 0.95934 1.01263 1.21972 1.01377 1.00732 0.95999 1.21123 0.94913 0.96263 0.96941 1.21674 1.01248 0.94402 0.97094 1.21684 0.91987 1.02307 0.98923 1.22121 0.94618 0.92781 0.82892 1.23540 1.02720 0.93908 0.96658 1.23631 1.04548 0.90626 0.85361 1.49868 1.61388 1.16721 1.08998 1.17670 0.78230 0.87171 0.80195 1.90848 1.56728 1.25642 1.71351 1.19835 1.05621 0.94616 0.94697 1.17829 0.98666 0.80016 0.91997 1.91592 1.93736 1.37698 1.87416 1.21100 1.01700 0.90066 1.01859 1.20466 0.98851 0.95449 0.94520 1.25302 0.87227 0.99225 1.07624 1.86651 1.21158 1.41784 1.85099 0.93813 0.89186 0.77119 0.72471 1.17338 1.01293 0.79780 0.92907 1.91571 1.94283 1.36537 1.87921 1.21878 0.98185 0.89140 1.01961 1.21597 0.99637 0.95048 0.98675 1.21630 0.95318 1.00524 0.96830 0.93658 0.92785 0.91460 0.92267 0.92671 0.93719 0.91233 0.93129 0.92020 0.93413 0.89100 0.90644 0.89208 0.93879 0.88266 0.85895 0.88124 0.86431 0.81093 0.84836 0.76044 1.21837 1.19782 0.79925 0.94298 0.92698 0.89552 0.92042 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.33 8.12 71.98 0.58 0.91 16 2 C -0.06 0.16 0.57 -52.18 -0.03 0.13 16 3 C -0.15 0.09 8.12 71.98 0.58 0.68 16 4 C -0.14 0.71 7.77 71.98 0.56 1.26 16 5 C -0.07 0.14 1.50 -10.81 -0.02 0.12 16 6 C -0.11 0.56 4.40 30.63 0.13 0.69 16 7 C -0.11 0.30 5.26 30.58 0.16 0.47 16 8 C 0.16 -0.22 0.98 0.02 0.00 -0.22 16 9 C -0.13 1.10 7.17 30.94 0.22 1.32 16 10 C 0.08 -0.64 5.96 82.85 0.49 -0.15 16 11 N -0.64 -0.83 3.36 -817.76 -2.74 -3.57 16 12 C 0.58 5.05 7.91 86.74 0.69 5.73 16 13 O -0.57 -10.13 15.18 -3.94 -0.06 -10.19 16 14 C -0.14 -0.62 5.88 -20.06 -0.12 -0.74 16 15 C 0.14 0.74 7.28 22.67 0.16 0.90 16 16 F -0.13 -1.46 15.58 44.97 0.70 -0.76 16 17 C -0.13 0.06 8.62 22.27 0.19 0.26 16 18 C -0.09 0.14 5.27 -19.78 -0.10 0.04 16 19 C -0.09 0.23 2.44 71.24 0.17 0.40 16 20 O -0.54 -0.17 12.88 -148.98 -1.92 -2.09 16 21 Si 0.77 -3.26 30.23 68.60 2.07 -1.18 16 22 C 0.11 -0.06 7.23 22.33 0.16 0.10 16 23 F -0.12 -0.15 16.73 44.97 0.75 0.60 16 24 C -0.09 0.13 9.14 22.57 0.21 0.34 16 25 C -0.11 -0.35 4.84 30.58 0.15 -0.20 16 26 C -0.11 0.15 4.41 30.63 0.14 0.28 16 27 H 0.04 -0.01 8.14 -2.39 -0.02 -0.03 16 28 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 29 H 0.07 -0.27 6.39 -2.39 -0.02 -0.28 16 30 H 0.06 -0.05 6.38 -2.39 -0.02 -0.06 16 31 H 0.05 -0.04 8.14 -2.39 -0.02 -0.06 16 32 H 0.04 0.06 8.14 -2.39 -0.02 0.04 16 33 H 0.07 -0.48 6.46 -2.39 -0.02 -0.50 16 34 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 35 H 0.06 -0.33 6.46 -2.39 -0.02 -0.34 16 36 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 37 H 0.09 -0.80 5.73 -2.39 -0.01 -0.82 16 38 H 0.08 -0.39 6.34 -2.39 -0.02 -0.41 16 39 H 0.09 -0.59 7.01 -2.38 -0.02 -0.61 16 40 H 0.04 0.15 8.14 -2.39 -0.02 0.13 16 41 H 0.10 -0.78 8.12 -2.38 -0.02 -0.80 16 42 H 0.12 -1.63 7.36 -2.39 -0.02 -1.64 16 43 H 0.10 -1.07 6.40 -2.39 -0.02 -1.08 16 44 H 0.12 -1.45 7.28 -2.39 -0.02 -1.46 16 45 H 0.17 -0.66 4.83 -2.91 -0.01 -0.67 16 46 H 0.13 -0.53 7.89 -2.39 -0.02 -0.55 16 47 H 0.39 -2.29 8.70 -74.06 -0.64 -2.94 16 48 H -0.29 -0.90 7.11 99.48 0.71 -0.19 16 49 H -0.27 0.36 6.68 99.48 0.66 1.03 16 50 H 0.18 -1.22 3.99 -2.91 -0.01 -1.23 16 51 H 0.04 0.42 7.65 -2.39 -0.02 0.40 16 52 H 0.05 0.27 8.13 -2.39 -0.02 0.25 16 53 H 0.09 -0.41 6.32 -2.38 -0.02 -0.43 16 54 H 0.06 0.02 6.33 -2.39 -0.02 0.01 16 Total: 0.00 -20.77 405.38 3.45 -17.32 By element: Atomic # 1 Polarization: -12.77 SS G_CDS: 0.30 Total: -12.47 kcal Atomic # 6 Polarization: 7.99 SS G_CDS: 4.34 Total: 12.33 kcal Atomic # 7 Polarization: -0.83 SS G_CDS: -2.74 Total: -3.57 kcal Atomic # 8 Polarization: -10.30 SS G_CDS: -1.98 Total: -12.28 kcal Atomic # 9 Polarization: -1.61 SS G_CDS: 1.45 Total: -0.15 kcal Atomic # 14 Polarization: -3.26 SS G_CDS: 2.07 Total: -1.18 kcal Total: -20.77 3.45 -17.32 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17760998_12360598.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.388 kcal (2) G-P(sol) polarization free energy of solvation -20.769 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.156 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.445 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.323 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.711 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds