Wall clock time and date at job start Tue Mar 9 2021 13:54:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53008 * 109.47142 * 2 1 4 4 C 1.53001 * 109.47226 * 240.00075 * 2 1 3 5 5 C 1.53001 * 109.47182 * 119.99874 * 2 1 3 6 6 C 1.52973 * 109.43384 * 60.00346 * 5 2 1 7 7 C 1.53116 * 109.44777 * 181.63999 * 6 5 2 8 8 C 1.52844 * 109.22359 * 301.99118 * 7 6 5 9 9 C 1.53479 * 113.40120 * 285.94305 * 8 7 6 10 10 C 1.53537 * 83.17214 * 271.19739 * 9 8 7 11 11 N 1.46744 * 113.46490 * 187.28067 * 8 7 6 12 12 C 1.34773 * 136.09892 * 267.96211 * 11 8 7 13 13 O 1.21573 * 119.99997 * 2.51220 * 12 11 8 14 14 C 1.47724 * 120.00364 * 182.51552 * 12 11 8 15 15 C 1.39633 * 120.12021 * 172.09475 * 14 12 11 16 16 C 1.37856 * 119.87965 * 180.02562 * 15 14 12 17 17 C 1.50700 * 119.93883 * 180.02562 * 16 15 14 18 18 O 1.42901 * 109.47254 * 14.97296 * 17 16 15 19 19 Si 1.86305 * 109.47286 * 134.97945 * 17 16 15 20 20 C 1.38635 * 120.11937 * 359.97438 * 16 15 14 21 21 F 1.35101 * 119.88004 * 180.02562 * 20 16 15 22 22 C 1.38674 * 120.23904 * 359.97438 * 20 16 15 23 23 C 1.37820 * 120.11611 * 0.28614 * 22 20 16 24 24 C 1.52846 * 112.67759 * 56.59526 * 8 7 6 25 25 C 1.52963 * 109.39954 * 180.19487 * 5 2 1 26 26 H 1.08995 * 109.46933 * 300.00362 * 1 2 3 27 27 H 1.09005 * 109.47006 * 59.99786 * 1 2 3 28 28 H 1.08995 * 109.46921 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.46536 * 179.97438 * 3 2 1 30 30 H 1.08994 * 109.47002 * 299.99687 * 3 2 1 31 31 H 1.08996 * 109.46638 * 60.00288 * 3 2 1 32 32 H 1.08993 * 109.47316 * 300.00273 * 4 2 1 33 33 H 1.09005 * 109.47014 * 60.00144 * 4 2 1 34 34 H 1.09002 * 109.47287 * 179.97438 * 4 2 1 35 35 H 1.08993 * 109.43512 * 300.09172 * 5 2 1 36 36 H 1.08997 * 109.48019 * 61.64165 * 6 5 2 37 37 H 1.09007 * 109.47458 * 301.63668 * 6 5 2 38 38 H 1.08996 * 109.51707 * 182.06359 * 7 6 5 39 39 H 1.09004 * 109.55498 * 61.93931 * 7 6 5 40 40 H 1.09008 * 114.40775 * 157.65971 * 9 8 7 41 41 H 1.08998 * 114.28695 * 24.72849 * 9 8 7 42 42 H 1.09004 * 113.46060 * 219.20913 * 10 9 8 43 43 H 1.09001 * 113.51384 * 88.81279 * 10 9 8 44 44 H 1.08003 * 120.06165 * 0.04222 * 15 14 12 45 45 H 1.09007 * 109.46956 * 254.97840 * 17 16 15 46 46 H 0.96697 * 113.99505 * 60.00491 * 18 17 16 47 47 H 1.48495 * 109.99791 * 180.02562 * 19 17 16 48 48 H 1.48503 * 109.99630 * 301.31523 * 19 17 16 49 49 H 1.08003 * 119.93951 * 180.02562 * 22 20 16 50 50 H 1.08002 * 120.05517 * 179.74366 * 23 22 20 51 51 H 1.08999 * 109.51423 * 63.33025 * 24 8 7 52 52 H 1.09005 * 109.51031 * 183.48290 * 24 8 7 53 53 H 1.09000 * 109.47963 * 298.32895 * 25 5 2 54 54 H 1.08998 * 109.47843 * 58.34944 * 25 5 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7212 -1.2493 5 6 2.0400 -0.7212 1.2493 6 6 1.5297 -2.1633 1.2484 7 6 2.0059 -2.8734 2.5186 8 6 3.5324 -2.8265 2.5791 9 6 4.2114 -3.7845 1.5907 10 6 4.0938 -4.7775 2.7558 11 7 4.0987 -3.6261 3.6715 12 6 4.4589 -3.4048 4.9513 13 8 4.2855 -2.3102 5.4510 14 6 5.0644 -4.4923 5.7468 15 6 5.5887 -4.2258 7.0132 16 6 6.1531 -5.2442 7.7512 17 6 6.7189 -4.9581 9.1184 18 8 6.2541 -3.6843 9.5692 19 14 6.1635 -6.2790 10.3091 20 6 6.2003 -6.5313 7.2383 21 9 6.7541 -7.5259 7.9658 22 6 5.6802 -6.8018 5.9816 23 6 5.1185 -5.7900 5.2332 24 6 4.0811 -1.4011 2.5204 25 6 3.5696 -0.7160 1.2500 26 1 -0.3633 0.5139 0.8899 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 3.1300 1.4425 0.0005 30 1 1.6768 1.9563 -0.8900 31 1 1.6767 1.9563 0.8900 32 1 1.6767 -1.7488 -1.2493 33 1 1.6767 -0.2073 -2.1393 34 1 3.1300 -0.7208 -1.2495 35 1 1.6750 -0.2079 2.1388 36 1 1.9168 -2.6854 0.3734 37 1 0.4400 -2.1632 1.2188 38 1 1.6739 -3.9114 2.5018 39 1 1.5914 -2.3728 3.3937 40 1 5.2361 -3.5153 1.3342 41 1 3.6026 -4.0390 0.7231 42 1 4.9653 -5.4230 2.8655 43 1 3.1556 -5.3324 2.7613 44 1 5.5519 -3.2235 7.4141 45 1 7.8077 -4.9501 9.0666 46 1 5.2918 -3.6190 9.6392 47 1 6.7143 -6.0079 11.6612 48 1 4.6801 -6.3215 10.3647 49 1 5.7191 -7.8064 5.5869 50 1 4.7174 -6.0009 4.2528 51 1 3.7439 -0.8449 3.3950 52 1 5.1706 -1.4308 2.5046 53 1 3.9354 -1.2533 0.3751 54 1 3.9296 0.3124 1.2218 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17760998_12496548.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:54:39 Heat of formation + Delta-G solvation = -45.653896 kcal Electronic energy + Delta-G solvation = -34106.739536 eV Core-core repulsion = 29732.736811 eV Total energy + Delta-G solvation = -4374.002724 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.204 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -50.30336 -42.47984 -40.83797 -39.72606 -38.80997 -37.85886 -35.24174 -33.03810 -32.15702 -32.10554 -30.46017 -29.16180 -28.17562 -28.10481 -27.21577 -25.17874 -24.63210 -23.55568 -23.28850 -22.61841 -21.56473 -19.63800 -19.19517 -18.82967 -18.49627 -17.90388 -17.69257 -17.22979 -17.01419 -16.84228 -16.20831 -16.04623 -15.72133 -15.62480 -15.28143 -15.19705 -15.04955 -14.97088 -14.67981 -14.56499 -14.40720 -14.30068 -14.14277 -13.84919 -13.61362 -13.44731 -13.33458 -13.16684 -12.89887 -12.74523 -12.69202 -12.61658 -12.56457 -12.48802 -12.38737 -12.09295 -12.05099 -11.87192 -11.65784 -11.28559 -11.24706 -11.12033 -10.96711 -10.80440 -10.78253 -10.13760 -9.86843 -9.64871 -4.87985 -0.52372 -0.02515 1.13209 1.47676 1.55719 1.67380 1.84937 2.53247 2.91502 3.08180 3.21401 3.29710 3.42624 3.61952 3.63938 3.67771 3.76257 3.89643 3.93869 3.97615 4.06385 4.07328 4.21238 4.30343 4.31641 4.37147 4.37881 4.47754 4.48964 4.51161 4.54992 4.61250 4.72623 4.75947 4.80153 4.81873 4.86578 4.88043 4.91408 4.94518 4.96131 4.97883 5.01458 5.07631 5.11394 5.14400 5.18916 5.19956 5.21896 5.24439 5.27739 5.37564 5.43249 5.48565 5.59946 5.61492 5.68293 6.26878 6.63461 6.99278 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.061 4.061 3 C -0.147 4.147 4 C -0.143 4.143 5 C -0.074 4.074 6 C -0.106 4.106 7 C -0.110 4.110 8 C 0.157 3.843 9 C -0.132 4.132 10 C 0.081 3.919 11 N -0.639 5.639 12 C 0.577 3.423 13 O -0.585 6.585 14 C -0.149 4.149 15 C -0.043 4.043 16 C -0.162 4.162 17 C -0.082 4.082 18 O -0.546 6.546 19 Si 0.750 3.250 20 C 0.119 3.881 21 F -0.099 7.099 22 C -0.139 4.139 23 C -0.064 4.064 24 C -0.111 4.111 25 C -0.105 4.105 26 H 0.043 0.957 27 H 0.054 0.946 28 H 0.067 0.933 29 H 0.059 0.941 30 H 0.055 0.945 31 H 0.043 0.957 32 H 0.069 0.931 33 H 0.050 0.950 34 H 0.061 0.939 35 H 0.045 0.955 36 H 0.092 0.908 37 H 0.074 0.926 38 H 0.090 0.910 39 H 0.038 0.962 40 H 0.099 0.901 41 H 0.121 0.879 42 H 0.109 0.891 43 H 0.116 0.884 44 H 0.130 0.870 45 H 0.134 0.866 46 H 0.386 0.614 47 H -0.288 1.288 48 H -0.286 1.286 49 H 0.184 0.816 50 H 0.180 0.820 51 H 0.035 0.965 52 H 0.054 0.946 53 H 0.087 0.913 54 H 0.060 0.940 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.908 -8.119 -9.003 12.157 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.061 4.061 3 C -0.204 4.204 4 C -0.200 4.200 5 C -0.093 4.093 6 C -0.144 4.144 7 C -0.149 4.149 8 C 0.073 3.927 9 C -0.169 4.169 10 C -0.039 4.039 11 N -0.371 5.371 12 C 0.369 3.631 13 O -0.467 6.467 14 C -0.152 4.152 15 C -0.062 4.062 16 C -0.163 4.163 17 C -0.190 4.190 18 O -0.354 6.354 19 Si 0.654 3.346 20 C 0.099 3.901 21 F -0.077 7.077 22 C -0.157 4.157 23 C -0.082 4.082 24 C -0.150 4.150 25 C -0.143 4.143 26 H 0.062 0.938 27 H 0.073 0.927 28 H 0.086 0.914 29 H 0.078 0.922 30 H 0.074 0.926 31 H 0.062 0.938 32 H 0.088 0.912 33 H 0.069 0.931 34 H 0.080 0.920 35 H 0.063 0.937 36 H 0.110 0.890 37 H 0.092 0.908 38 H 0.108 0.892 39 H 0.057 0.943 40 H 0.117 0.883 41 H 0.139 0.861 42 H 0.127 0.873 43 H 0.134 0.866 44 H 0.148 0.852 45 H 0.152 0.848 46 H 0.235 0.765 47 H -0.215 1.215 48 H -0.212 1.212 49 H 0.201 0.799 50 H 0.196 0.804 51 H 0.053 0.947 52 H 0.073 0.927 53 H 0.106 0.894 54 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -0.712 -7.598 -7.761 10.884 hybrid contribution -0.636 1.785 1.000 2.143 sum -1.349 -5.813 -6.761 9.018 Atomic orbital electron populations 1.21947 0.94734 1.02280 1.01247 1.20503 0.95356 0.94923 0.95298 1.21966 1.01277 0.95959 1.01233 1.21972 1.01405 1.00742 0.95928 1.21119 0.94977 0.96302 0.96860 1.21669 1.01160 0.94377 0.97181 1.21671 0.92289 1.02207 0.98698 1.22098 0.94460 0.92723 0.83424 1.23537 1.02602 0.94053 0.96715 1.23642 1.04747 0.90558 0.84963 1.49870 1.61459 1.16631 1.09167 1.18041 0.77909 0.87237 0.79918 1.90776 1.57992 1.27313 1.70596 1.19953 1.04697 0.94810 0.95752 1.20843 0.93726 0.99282 0.92392 1.20308 1.04069 0.92949 0.98988 1.25135 1.04079 0.93816 0.95973 1.86566 1.28411 1.32152 1.88239 0.94111 0.78862 0.85789 0.75883 1.17783 0.96943 0.83721 0.91667 1.91198 1.82635 1.59307 1.74549 1.21511 0.99391 1.02757 0.92087 1.22114 0.95131 0.89792 1.01148 1.21593 0.99614 0.95256 0.98505 1.21623 0.95256 1.00483 0.96899 0.93771 0.92730 0.91442 0.92244 0.92618 0.93825 0.91177 0.93103 0.91971 0.93662 0.88973 0.90785 0.89200 0.94301 0.88285 0.86066 0.87307 0.86614 0.85237 0.84811 0.76453 1.21544 1.21234 0.79890 0.80365 0.94658 0.92690 0.89426 0.92150 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.30 8.12 71.98 0.58 0.88 16 2 C -0.06 0.15 0.57 -52.18 -0.03 0.12 16 3 C -0.15 0.06 8.12 71.98 0.58 0.64 16 4 C -0.14 0.72 7.77 71.98 0.56 1.28 16 5 C -0.07 0.11 1.50 -10.81 -0.02 0.10 16 6 C -0.11 0.54 4.40 30.62 0.13 0.67 16 7 C -0.11 0.28 5.26 30.58 0.16 0.44 16 8 C 0.16 -0.24 0.97 0.02 0.00 -0.24 16 9 C -0.13 1.21 7.17 30.94 0.22 1.43 16 10 C 0.08 -0.78 6.12 82.85 0.51 -0.27 16 11 N -0.64 -0.51 3.36 -817.85 -2.75 -3.26 16 12 C 0.58 4.94 7.89 86.75 0.68 5.63 16 13 O -0.59 -10.63 16.26 -3.94 -0.06 -10.69 16 14 C -0.15 -0.59 5.87 -20.09 -0.12 -0.71 16 15 C -0.04 -0.27 8.78 22.52 0.20 -0.07 16 16 C -0.16 -0.43 5.13 -19.86 -0.10 -0.54 16 17 C -0.08 -0.24 2.96 71.24 0.21 -0.03 16 18 O -0.55 -3.59 11.64 -148.98 -1.73 -5.32 16 19 Si 0.75 1.61 29.57 68.60 2.03 3.64 16 20 C 0.12 -0.16 6.67 22.47 0.15 -0.01 16 21 F -0.10 0.30 13.70 44.97 0.62 0.91 16 22 C -0.14 0.78 10.01 22.27 0.22 1.01 16 23 C -0.06 0.26 9.18 22.52 0.21 0.47 16 24 C -0.11 -0.38 4.88 30.58 0.15 -0.23 16 25 C -0.10 0.13 4.41 30.62 0.14 0.26 16 26 H 0.04 0.00 8.14 -2.39 -0.02 -0.02 16 27 H 0.05 -0.10 8.14 -2.38 -0.02 -0.12 16 28 H 0.07 -0.26 6.39 -2.39 -0.02 -0.27 16 29 H 0.06 -0.04 6.38 -2.39 -0.02 -0.05 16 30 H 0.05 -0.03 8.14 -2.39 -0.02 -0.05 16 31 H 0.04 0.07 8.14 -2.39 -0.02 0.05 16 32 H 0.07 -0.50 6.46 -2.39 -0.02 -0.51 16 33 H 0.05 -0.20 8.14 -2.38 -0.02 -0.22 16 34 H 0.06 -0.34 6.47 -2.39 -0.02 -0.35 16 35 H 0.04 0.16 8.14 -2.39 -0.02 0.14 16 36 H 0.09 -0.82 5.73 -2.39 -0.01 -0.84 16 37 H 0.07 -0.36 6.34 -2.38 -0.02 -0.38 16 38 H 0.09 -0.58 7.01 -2.39 -0.02 -0.60 16 39 H 0.04 0.16 8.14 -2.38 -0.02 0.14 16 40 H 0.10 -0.86 8.12 -2.38 -0.02 -0.88 16 41 H 0.12 -1.69 7.36 -2.39 -0.02 -1.70 16 42 H 0.11 -1.46 6.16 -2.38 -0.01 -1.48 16 43 H 0.12 -1.58 7.28 -2.39 -0.02 -1.60 16 44 H 0.13 1.29 6.68 -2.91 -0.02 1.27 16 45 H 0.13 0.13 7.96 -2.38 -0.02 0.11 16 46 H 0.39 0.68 8.43 -74.06 -0.62 0.05 16 47 H -0.29 -2.44 7.11 99.48 0.71 -1.73 16 48 H -0.29 -1.98 7.11 99.48 0.71 -1.28 16 49 H 0.18 -2.28 8.06 -2.91 -0.02 -2.31 16 50 H 0.18 -1.90 3.86 -2.91 -0.01 -1.91 16 51 H 0.03 0.40 7.67 -2.39 -0.02 0.38 16 52 H 0.05 0.28 8.13 -2.38 -0.02 0.26 16 53 H 0.09 -0.42 6.32 -2.39 -0.02 -0.44 16 54 H 0.06 0.04 6.33 -2.39 -0.02 0.03 16 Total: 0.00 -21.06 398.67 2.88 -18.17 By element: Atomic # 1 Polarization: -14.63 SS G_CDS: 0.34 Total: -14.29 kcal Atomic # 6 Polarization: 6.39 SS G_CDS: 4.44 Total: 10.84 kcal Atomic # 7 Polarization: -0.51 SS G_CDS: -2.75 Total: -3.26 kcal Atomic # 8 Polarization: -14.22 SS G_CDS: -1.80 Total: -16.02 kcal Atomic # 9 Polarization: 0.30 SS G_CDS: 0.62 Total: 0.91 kcal Atomic # 14 Polarization: 1.61 SS G_CDS: 2.03 Total: 3.64 kcal Total: -21.06 2.88 -18.17 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17760998_12496548.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.479 kcal (2) G-P(sol) polarization free energy of solvation -21.055 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.534 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.880 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.175 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.654 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds