Wall clock time and date at job start Tue Mar 9 2021 12:54:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17402 * 1 3 3 C 1.47193 * 179.97438 * 2 1 4 4 H 1.09004 * 109.46869 * 132.14549 * 3 2 1 5 5 C 1.52996 * 109.47372 * 252.14530 * 3 2 1 6 6 C 1.53000 * 109.47328 * 60.00055 * 5 3 2 7 7 C 1.52997 * 109.47060 * 60.00126 * 6 5 3 8 8 H 1.08998 * 109.47533 * 59.99948 * 7 6 5 9 9 N 1.46500 * 109.47473 * 180.02562 * 7 6 5 10 10 C 1.34770 * 120.00256 * 205.00145 * 9 7 6 11 11 O 1.21283 * 120.00026 * 359.97438 * 10 9 7 12 12 C 1.50701 * 119.99922 * 180.02562 * 10 9 7 13 13 O 1.42903 * 109.47057 * 179.97438 * 12 10 9 14 14 C 1.35904 * 117.00029 * 179.97438 * 13 12 10 15 15 C 1.38728 * 120.05320 * 359.73214 * 14 13 12 16 16 C 1.38154 * 119.93940 * 179.74202 * 15 14 13 17 17 C 1.38262 * 120.05244 * 0.50526 * 16 15 14 18 18 C 1.50703 * 119.94059 * 179.74543 * 17 16 15 19 19 O 1.42903 * 109.47357 * 120.01959 * 18 17 16 20 20 Si 1.86309 * 109.47062 * 0.02562 * 18 17 16 21 21 C 1.38262 * 120.11720 * 359.76910 * 17 16 15 22 22 C 1.38141 * 120.05491 * 359.97438 * 21 17 16 23 23 C 1.53006 * 109.47127 * 300.00449 * 7 6 5 24 24 C 1.52997 * 109.47164 * 59.99836 * 23 7 6 25 25 H 4.18739 * 15.03889 * 0.02562 * 4 2 1 26 26 H 1.09004 * 109.47368 * 300.00266 * 5 3 2 27 27 H 1.09001 * 109.47372 * 180.02562 * 5 3 2 28 28 H 1.09002 * 109.47398 * 180.02562 * 6 5 3 29 29 H 1.09001 * 109.47194 * 300.00476 * 6 5 3 30 30 H 0.97005 * 119.99374 * 25.00210 * 9 7 6 31 31 H 1.08991 * 109.47241 * 299.99575 * 12 10 9 32 32 H 1.09000 * 109.47273 * 60.00364 * 12 10 9 33 33 H 1.07997 * 120.03016 * 359.97438 * 15 14 13 34 34 H 1.08001 * 119.96852 * 180.23005 * 16 15 14 35 35 H 1.09000 * 109.47371 * 240.02144 * 18 17 16 36 36 H 0.96702 * 114.00177 * 300.00979 * 19 18 17 37 37 H 1.48498 * 109.99995 * 58.68226 * 20 18 17 38 38 H 1.48503 * 109.99866 * 179.97438 * 20 18 17 39 39 H 1.07994 * 119.97418 * 179.97438 * 21 17 16 40 40 H 1.08001 * 120.02859 * 180.02562 * 22 21 17 41 41 H 1.09001 * 109.47002 * 299.99574 * 23 7 6 42 42 H 1.09000 * 109.47050 * 179.97438 * 23 7 6 43 43 H 1.09002 * 109.47045 * 180.02562 * 24 23 7 44 44 H 1.09001 * 109.47375 * 59.99966 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 1 3.0089 0.6904 -0.7620 5 6 3.1558 0.4431 1.3730 6 6 2.6463 -0.5250 2.4426 7 6 3.1569 -1.9349 2.1391 8 1 4.2469 -1.9345 2.1390 9 7 2.6686 -2.8621 3.1628 10 6 3.3458 -3.9984 3.4211 11 8 4.3592 -4.2536 2.8056 12 6 2.8431 -4.9524 4.4738 13 8 3.7250 -6.0735 4.5609 14 6 3.4134 -7.0345 5.4699 15 6 2.2852 -6.8985 6.2657 16 6 1.9678 -7.8793 7.1854 17 6 2.7791 -8.9907 7.3202 18 6 2.4336 -10.0564 8.3282 19 8 2.2389 -11.3025 7.6563 20 14 0.8693 -9.5819 9.2221 21 6 3.9072 -9.1259 6.5323 22 6 4.2261 -8.1504 5.6075 23 6 2.6471 -2.3775 0.7660 24 6 3.1567 -1.4093 -0.3035 25 1 -1.0500 -0.0002 0.0009 26 1 2.7920 1.4477 1.5893 27 1 4.2458 0.4441 1.3728 28 1 3.0092 -0.2095 3.4208 29 1 1.5563 -0.5256 2.4426 30 1 1.8579 -2.6581 3.6548 31 1 2.8055 -4.4437 5.4370 32 1 1.8442 -5.2964 4.2053 33 1 1.6536 -6.0284 6.1638 34 1 1.0876 -7.7757 7.8025 35 1 3.2473 -10.1544 9.0468 36 1 1.5285 -11.2889 7.0004 37 1 -0.2404 -9.4143 8.2496 38 1 0.5174 -10.6252 10.2186 39 1 4.5395 -9.9947 6.6398 40 1 5.1071 -8.2567 4.9919 41 1 1.5571 -2.3780 0.7660 42 1 3.0113 -3.3818 0.5496 43 1 2.7931 -1.7243 -1.2816 44 1 4.2467 -1.4087 -0.3035 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17761044_2989410.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:44 Heat of formation + Delta-G solvation = -25.736050 kcal Electronic energy + Delta-G solvation = -25285.152805 eV Core-core repulsion = 21556.709903 eV Total energy + Delta-G solvation = -3728.442903 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.151 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -41.64183 -40.94830 -39.68543 -38.90369 -37.24743 -35.81364 -33.26079 -32.40842 -31.85349 -31.76076 -30.89165 -28.92402 -26.23810 -24.39920 -23.77458 -23.64180 -22.37364 -21.71554 -21.50189 -19.51637 -18.70618 -18.34297 -17.93557 -17.44188 -17.34345 -16.90824 -16.54061 -16.23651 -16.02419 -15.73767 -15.57419 -15.35004 -15.21927 -14.98177 -14.62440 -14.37819 -14.03440 -13.83023 -13.74419 -13.51255 -13.41426 -13.22691 -12.91514 -12.34237 -12.27219 -12.21733 -12.14416 -12.06899 -11.77842 -11.64139 -11.51467 -11.09320 -10.94379 -10.80475 -10.59298 -10.16660 -10.04473 -9.24329 -4.90681 0.26573 0.30149 1.33966 1.42748 1.47336 1.61702 1.94641 1.97309 1.98808 2.57852 2.64292 3.41875 3.43813 3.49424 3.68835 3.74299 3.76485 3.82186 3.93847 3.99787 4.02794 4.07309 4.10224 4.20353 4.30285 4.41653 4.43387 4.46551 4.50153 4.55890 4.63476 4.69230 4.85151 4.96707 5.02844 5.04187 5.10966 5.14057 5.15232 5.15749 5.24868 5.29071 5.36561 5.44724 5.48693 5.69160 6.25391 6.45710 6.50498 6.76032 7.11199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.219 4.219 2 C -0.194 4.194 3 C 0.016 3.984 4 H 0.103 0.897 5 C -0.107 4.107 6 C -0.119 4.119 7 C 0.149 3.851 8 H 0.072 0.928 9 N -0.707 5.707 10 C 0.513 3.487 11 O -0.571 6.571 12 C 0.037 3.963 13 O -0.320 6.320 14 C 0.121 3.879 15 C -0.200 4.200 16 C -0.075 4.075 17 C -0.158 4.158 18 C -0.082 4.082 19 O -0.551 6.551 20 Si 0.772 3.228 21 C -0.060 4.060 22 C -0.167 4.167 23 C -0.125 4.125 24 C -0.108 4.108 25 H 0.234 0.766 26 H 0.080 0.920 27 H 0.084 0.916 28 H 0.083 0.917 29 H 0.074 0.926 30 H 0.419 0.581 31 H 0.129 0.871 32 H 0.123 0.877 33 H 0.164 0.836 34 H 0.154 0.846 35 H 0.122 0.878 36 H 0.385 0.615 37 H -0.279 1.279 38 H -0.308 1.308 39 H 0.134 0.866 40 H 0.126 0.874 41 H 0.067 0.933 42 H 0.045 0.955 43 H 0.066 0.934 44 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.275 6.511 2.948 8.883 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C -0.194 4.194 3 C -0.002 4.002 4 H 0.121 0.879 5 C -0.145 4.145 6 C -0.157 4.157 7 C 0.045 3.955 8 H 0.091 0.909 9 N -0.361 5.361 10 C 0.299 3.701 11 O -0.449 6.449 12 C -0.041 4.041 13 O -0.233 6.233 14 C 0.076 3.924 15 C -0.219 4.219 16 C -0.093 4.093 17 C -0.159 4.159 18 C -0.191 4.191 19 O -0.360 6.360 20 Si 0.677 3.323 21 C -0.078 4.078 22 C -0.186 4.186 23 C -0.164 4.164 24 C -0.146 4.146 25 H 0.251 0.749 26 H 0.098 0.902 27 H 0.103 0.897 28 H 0.102 0.898 29 H 0.093 0.907 30 H 0.257 0.743 31 H 0.146 0.854 32 H 0.141 0.859 33 H 0.182 0.818 34 H 0.171 0.829 35 H 0.139 0.861 36 H 0.235 0.765 37 H -0.205 1.205 38 H -0.236 1.236 39 H 0.151 0.849 40 H 0.144 0.856 41 H 0.085 0.915 42 H 0.064 0.936 43 H 0.085 0.915 44 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -4.700 5.959 2.940 8.139 hybrid contribution -0.593 -0.891 -1.066 1.511 sum -5.293 5.068 1.873 7.564 Atomic orbital electron populations 1.25553 0.96780 1.00584 1.00680 1.23324 0.94838 1.00608 1.00584 1.18474 0.84423 0.97860 0.99453 0.87945 1.21528 1.01713 0.99207 0.92043 1.21763 1.01776 0.92057 1.00055 1.20982 0.99147 0.88798 0.86566 0.90941 1.45791 1.29497 1.20452 1.40337 1.20558 0.83563 0.82474 0.83533 1.90760 1.26644 1.75444 1.52071 1.22746 0.94699 0.86325 1.00332 1.86131 1.50848 1.30452 1.55883 1.19225 0.94714 0.88849 0.89659 1.21499 0.98198 1.02926 0.99254 1.21068 0.98854 0.92496 0.96834 1.20294 0.97160 0.97750 1.00687 1.25250 1.12648 0.83992 0.97188 1.86569 1.58796 1.32817 1.57775 0.94146 0.73473 0.86054 0.78581 1.20906 0.96135 0.97471 0.93307 1.20626 1.01613 0.93953 1.02373 1.21859 1.01104 0.98655 0.94747 1.21511 1.01404 0.93174 0.98488 0.74949 0.90156 0.89747 0.89831 0.90722 0.74328 0.85363 0.85941 0.81823 0.82919 0.86062 0.76537 1.20494 1.23635 0.84852 0.85611 0.91467 0.93571 0.91500 0.90184 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.22 0.17 19.25 74.32 1.43 1.60 16 2 C -0.19 -0.05 10.06 31.12 0.31 0.26 16 3 C 0.02 -0.04 3.07 -12.60 -0.04 -0.08 16 4 H 0.10 -0.41 8.14 -2.38 -0.02 -0.43 16 5 C -0.11 0.53 5.43 30.59 0.17 0.70 16 6 C -0.12 0.63 5.17 30.59 0.16 0.79 16 7 C 0.15 -0.18 2.45 44.99 0.11 -0.07 16 8 H 0.07 0.24 7.58 -2.39 -0.02 0.22 16 9 N -0.71 2.53 5.08 -442.53 -2.25 0.28 16 10 C 0.51 1.51 7.87 87.66 0.69 2.20 16 11 O -0.57 -8.27 16.16 16.00 0.26 -8.01 16 12 C 0.04 -0.12 5.22 71.24 0.37 0.26 16 13 O -0.32 -1.93 9.67 -73.43 -0.71 -2.64 16 14 C 0.12 0.41 6.69 22.51 0.15 0.56 16 15 C -0.20 0.54 9.04 22.37 0.20 0.74 16 16 C -0.08 0.22 8.66 22.26 0.19 0.42 16 17 C -0.16 -0.01 5.39 -19.85 -0.11 -0.11 16 18 C -0.08 0.06 2.82 71.24 0.20 0.26 16 19 O -0.55 -1.59 12.77 -148.98 -1.90 -3.49 16 20 Si 0.77 -2.47 29.78 68.60 2.04 -0.43 16 21 C -0.06 -0.17 9.60 22.25 0.21 0.04 16 22 C -0.17 -0.83 9.99 22.37 0.22 -0.61 16 23 C -0.13 -0.10 5.27 30.60 0.16 0.06 16 24 C -0.11 0.10 5.43 30.59 0.17 0.27 16 25 H 0.23 -1.50 7.80 -4.42 -0.03 -1.53 16 26 H 0.08 -0.45 8.14 -2.39 -0.02 -0.47 16 27 H 0.08 -0.50 8.14 -2.39 -0.02 -0.52 16 28 H 0.08 -0.59 8.14 -2.39 -0.02 -0.61 16 29 H 0.07 -0.41 7.23 -2.39 -0.02 -0.42 16 30 H 0.42 -4.57 8.60 -92.70 -0.80 -5.36 16 31 H 0.13 -1.29 7.65 -2.39 -0.02 -1.31 16 32 H 0.12 -1.12 7.68 -2.39 -0.02 -1.14 16 33 H 0.16 -1.63 6.30 -2.91 -0.02 -1.65 16 34 H 0.15 -1.24 4.87 -2.91 -0.01 -1.25 16 35 H 0.12 -0.23 7.96 -2.39 -0.02 -0.25 16 36 H 0.39 -1.05 8.70 -74.06 -0.64 -1.69 16 37 H -0.28 0.06 7.11 99.48 0.71 0.77 16 38 H -0.31 -1.62 7.11 99.48 0.71 -0.92 16 39 H 0.13 0.26 8.06 -2.91 -0.02 0.24 16 40 H 0.13 0.70 8.06 -2.91 -0.02 0.68 16 41 H 0.07 0.05 7.23 -2.39 -0.02 0.03 16 42 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 43 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 44 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 Total: 0.00 -24.20 363.79 1.66 -22.54 By element: Atomic # 1 Polarization: -15.15 SS G_CDS: -0.39 Total: -15.54 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: 4.61 Total: 7.30 kcal Atomic # 7 Polarization: 2.53 SS G_CDS: -2.25 Total: 0.28 kcal Atomic # 8 Polarization: -11.79 SS G_CDS: -2.35 Total: -14.15 kcal Atomic # 14 Polarization: -2.47 SS G_CDS: 2.04 Total: -0.43 kcal Total: -24.20 1.66 -22.54 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_2989410.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.201 kcal (2) G-P(sol) polarization free energy of solvation -24.198 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.399 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.663 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.535 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.736 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds