Wall clock time and date at job start Tue Mar 9 2021 12:54:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17400 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 H 1.09007 * 109.46892 * 227.29314 * 3 2 1 5 5 C 1.52999 * 109.47572 * 347.29650 * 3 2 1 6 6 C 1.52994 * 109.47128 * 60.00035 * 5 3 2 7 7 C 1.52999 * 109.47408 * 59.99898 * 6 5 3 8 8 H 1.09006 * 109.46723 * 59.99856 * 7 6 5 9 9 N 1.46493 * 109.47169 * 180.02562 * 7 6 5 10 10 C 1.34779 * 119.99945 * 275.00209 * 9 7 6 11 11 O 1.21696 * 120.00128 * 359.97438 * 10 9 7 12 12 C 1.46665 * 119.99984 * 180.02562 * 10 9 7 13 13 C 1.36545 * 125.98674 * 179.97438 * 12 10 9 14 14 C 1.50701 * 126.64412 * 359.69838 * 13 12 10 15 15 C 1.40357 * 106.70827 * 179.73780 * 13 12 10 16 16 C 1.35139 * 107.11426 * 359.97438 * 15 13 12 17 17 C 1.50697 * 125.61450 * 179.97438 * 16 15 13 18 18 O 1.42902 * 109.47029 * 90.00607 * 17 16 15 19 19 C 1.35903 * 117.00085 * 179.97438 * 18 17 16 20 20 C 1.38728 * 120.05432 * 359.72953 * 19 18 17 21 21 C 1.38142 * 119.94228 * 179.74625 * 20 19 18 22 22 C 1.38271 * 120.05536 * 0.49893 * 21 20 19 23 23 C 1.50704 * 119.94547 * 179.74922 * 22 21 20 24 24 O 1.42899 * 109.46966 * 245.02375 * 23 22 21 25 25 Si 1.86302 * 109.46985 * 5.02429 * 23 22 21 26 26 C 1.38266 * 120.11208 * 359.77239 * 22 21 20 27 27 C 1.38150 * 120.05373 * 359.97438 * 26 22 21 28 28 O 1.33930 * 108.76462 * 0.02562 * 16 15 13 29 29 C 1.52999 * 109.47059 * 300.00144 * 7 6 5 30 30 C 1.53002 * 109.47090 * 60.00140 * 29 7 6 31 31 H 4.18735 * 15.04061 * 359.97438 * 4 2 1 32 32 H 1.09006 * 109.47118 * 180.02562 * 5 3 2 33 33 H 1.09006 * 109.46802 * 299.99644 * 5 3 2 34 34 H 1.08999 * 109.46974 * 299.99919 * 6 5 3 35 35 H 1.09001 * 109.47053 * 180.02562 * 6 5 3 36 36 H 0.96998 * 120.00157 * 95.00418 * 9 7 6 37 37 H 1.09006 * 109.46939 * 90.00112 * 14 13 12 38 38 H 1.08996 * 109.46989 * 209.99739 * 14 13 12 39 39 H 1.08997 * 109.47371 * 330.00225 * 14 13 12 40 40 H 1.08003 * 126.44764 * 179.97438 * 15 13 12 41 41 H 1.08999 * 109.47188 * 210.00084 * 17 16 15 42 42 H 1.08993 * 109.47521 * 330.00641 * 17 16 15 43 43 H 1.08002 * 120.03001 * 359.97438 * 20 19 18 44 44 H 1.08004 * 119.97453 * 180.23177 * 21 20 19 45 45 H 1.09002 * 109.47203 * 125.02241 * 23 22 21 46 46 H 0.96704 * 114.00024 * 60.00254 * 24 23 22 47 47 H 1.48500 * 109.99835 * 180.02562 * 25 23 22 48 48 H 1.48497 * 109.99808 * 301.31933 * 25 23 22 49 49 H 1.08002 * 119.97364 * 179.97438 * 26 22 21 50 50 H 1.07997 * 120.02755 * 179.97438 * 27 26 22 51 51 H 1.09002 * 109.46738 * 179.97438 * 29 7 6 52 52 H 1.08994 * 109.47452 * 299.99543 * 29 7 6 53 53 H 1.08994 * 109.47460 * 59.99408 * 30 29 7 54 54 H 1.09001 * 109.47015 * 179.97438 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 1 3.0089 0.6979 0.7552 5 6 3.1567 -1.4063 0.3172 6 6 2.6472 -2.3848 -0.7428 7 6 3.1569 -1.9557 -2.1201 8 1 4.2470 -1.9551 -2.1201 9 7 2.6685 -2.8923 -3.1351 10 6 3.3454 -4.0313 -3.3824 11 8 4.3626 -4.2814 -2.7628 12 6 2.8568 -4.9688 -4.3990 13 6 3.4430 -6.1517 -4.7474 14 6 4.7075 -6.7335 -4.1696 15 6 2.6404 -6.7204 -5.7485 16 6 1.6120 -5.8706 -5.9642 17 6 0.4984 -6.0751 -6.9588 18 8 -0.5773 -6.7765 -6.3319 19 6 -1.6687 -7.0431 -7.0966 20 6 -1.7059 -6.6329 -8.4213 21 6 -2.8144 -6.9097 -9.1979 22 6 -3.8904 -7.5858 -8.6530 23 6 -5.1007 -7.8815 -9.5009 24 8 -6.2277 -7.1684 -8.9875 25 14 -4.7749 -7.3476 -11.2558 26 6 -3.8581 -7.9907 -7.3314 27 6 -2.7498 -7.7209 -6.5520 28 8 1.7461 -4.8163 -5.1493 29 6 2.6462 -0.5488 -2.4373 30 6 3.1558 0.4298 -1.3773 31 1 -1.0500 -0.0001 -0.0008 32 1 4.2467 -1.4056 0.3176 33 1 2.7935 -1.7119 1.2985 34 1 1.5572 -2.3854 -0.7428 35 1 3.0107 -3.3872 -0.5166 36 1 1.8580 -2.6928 -3.6292 37 1 4.4606 -7.3588 -3.3115 38 1 5.2088 -7.3367 -4.9264 39 1 5.3673 -5.9259 -3.8527 40 1 2.8122 -7.6604 -6.2519 41 1 0.1439 -5.1067 -7.3116 42 1 0.8679 -6.6565 -7.8035 43 1 -0.8675 -6.1010 -8.8462 44 1 -2.8423 -6.5939 -10.2304 45 1 -5.3070 -8.9516 -9.4791 46 1 -6.1141 -6.2081 -8.9772 47 1 -5.9612 -7.6332 -12.1021 48 1 -4.4609 -5.8967 -11.2953 49 1 -4.7000 -8.5183 -6.9079 50 1 -2.7251 -8.0370 -5.5196 51 1 3.0097 -0.2429 -3.4184 52 1 1.5562 -0.5493 -2.4373 53 1 4.2457 0.4303 -1.3773 54 1 2.7923 1.4322 -1.6036 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17761044_4549632.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:59 Heat of formation + Delta-G solvation = -8.606314 kcal Electronic energy + Delta-G solvation = -35701.050614 eV Core-core repulsion = 30958.914661 eV Total energy + Delta-G solvation = -4742.135953 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.182 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -43.96010 -41.33232 -41.14129 -39.54524 -39.25268 -37.31396 -36.10382 -35.13053 -33.43775 -33.01444 -32.06765 -31.88413 -31.56501 -30.53844 -28.87654 -28.01248 -26.22298 -24.55210 -23.89645 -23.77132 -22.76676 -22.41967 -22.20689 -21.74108 -20.80563 -19.48976 -19.36745 -18.46040 -18.17967 -17.60846 -17.53525 -17.40494 -16.91718 -16.69565 -16.50053 -16.20583 -15.95039 -15.86406 -15.63616 -15.39569 -15.34511 -15.16640 -14.78355 -14.65844 -14.39473 -14.27404 -14.12900 -13.99991 -13.84351 -13.75765 -13.67035 -13.47421 -13.43366 -13.26194 -12.97227 -12.80813 -12.34312 -12.31428 -12.24819 -12.12959 -12.04418 -11.81645 -11.60431 -11.57487 -11.33619 -10.98667 -10.88367 -10.82059 -10.58290 -10.31602 -10.03721 -9.73280 -9.25304 -4.91111 -0.28379 0.27080 0.31001 0.95278 1.33434 1.33903 1.60006 1.90679 1.91847 1.94067 1.96802 1.97838 2.36144 2.64593 3.27131 3.40471 3.45260 3.56083 3.62674 3.70471 3.71280 3.73719 3.80165 3.93442 3.95982 4.01108 4.07152 4.08389 4.16521 4.27975 4.30908 4.39843 4.41736 4.43192 4.45908 4.46464 4.55630 4.59031 4.60099 4.70703 4.71248 4.82591 4.95467 4.96428 4.97707 5.00794 5.06005 5.09628 5.11213 5.12211 5.15782 5.24457 5.25828 5.28088 5.35326 5.40410 5.49995 5.66581 5.69383 6.28039 6.28679 6.50267 6.72661 6.87766 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.225 4.225 2 C -0.191 4.191 3 C 0.015 3.985 4 H 0.107 0.893 5 C -0.105 4.105 6 C -0.126 4.126 7 C 0.148 3.852 8 H 0.086 0.914 9 N -0.708 5.708 10 C 0.603 3.397 11 O -0.542 6.542 12 C -0.096 4.096 13 C -0.095 4.095 14 C -0.094 4.094 15 C -0.185 4.185 16 C 0.009 3.991 17 C 0.136 3.864 18 O -0.327 6.327 19 C 0.125 3.875 20 C -0.201 4.201 21 C -0.078 4.078 22 C -0.157 4.157 23 C -0.080 4.080 24 O -0.551 6.551 25 Si 0.769 3.231 26 C -0.060 4.060 27 C -0.163 4.163 28 O -0.162 6.162 29 C -0.121 4.121 30 C -0.104 4.104 31 H 0.231 0.769 32 H 0.087 0.913 33 H 0.068 0.932 34 H 0.059 0.941 35 H 0.051 0.949 36 H 0.412 0.588 37 H 0.076 0.924 38 H 0.090 0.910 39 H 0.072 0.928 40 H 0.185 0.815 41 H 0.101 0.899 42 H 0.133 0.867 43 H 0.159 0.841 44 H 0.149 0.851 45 H 0.122 0.878 46 H 0.385 0.615 47 H -0.308 1.308 48 H -0.279 1.279 49 H 0.135 0.865 50 H 0.131 0.869 51 H 0.080 0.920 52 H 0.067 0.933 53 H 0.090 0.910 54 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.600 1.328 -4.357 4.827 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C -0.191 4.191 3 C -0.003 4.003 4 H 0.125 0.875 5 C -0.143 4.143 6 C -0.164 4.164 7 C 0.045 3.955 8 H 0.104 0.896 9 N -0.357 5.357 10 C 0.390 3.610 11 O -0.422 6.422 12 C -0.148 4.148 13 C -0.098 4.098 14 C -0.151 4.151 15 C -0.204 4.204 16 C -0.043 4.043 17 C 0.062 3.938 18 O -0.242 6.242 19 C 0.080 3.920 20 C -0.220 4.220 21 C -0.096 4.096 22 C -0.157 4.157 23 C -0.189 4.189 24 O -0.359 6.359 25 Si 0.674 3.326 26 C -0.078 4.078 27 C -0.182 4.182 28 O -0.059 6.059 29 C -0.159 4.159 30 C -0.142 4.142 31 H 0.248 0.752 32 H 0.106 0.894 33 H 0.087 0.913 34 H 0.077 0.923 35 H 0.070 0.930 36 H 0.248 0.752 37 H 0.094 0.906 38 H 0.109 0.891 39 H 0.090 0.910 40 H 0.202 0.798 41 H 0.119 0.881 42 H 0.151 0.849 43 H 0.177 0.823 44 H 0.166 0.834 45 H 0.140 0.860 46 H 0.234 0.766 47 H -0.236 1.236 48 H -0.206 1.206 49 H 0.152 0.848 50 H 0.149 0.851 51 H 0.099 0.901 52 H 0.085 0.915 53 H 0.109 0.891 54 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 1.712 1.312 -4.265 4.779 hybrid contribution -1.341 0.732 0.685 1.675 sum 0.371 2.044 -3.580 4.139 Atomic orbital electron populations 1.25543 0.96854 1.00862 1.00931 1.23416 0.94985 1.00368 1.00354 1.18525 0.84109 0.98203 0.99426 0.87470 1.21507 1.01763 0.92733 0.98296 1.21865 1.00786 0.99121 0.94648 1.21111 0.99686 0.88269 0.86450 0.89610 1.45978 1.29016 1.20203 1.40529 1.16620 0.83112 0.80703 0.80590 1.90848 1.25196 1.75758 1.50413 1.21899 0.91412 1.00353 1.01131 1.20987 0.98832 0.93098 0.96856 1.20453 0.92219 1.01304 1.01094 1.21903 0.95418 1.02394 1.00719 1.22442 0.98740 0.87296 0.95796 1.21262 0.82251 0.99441 0.90842 1.86111 1.25129 1.72785 1.40180 1.19100 0.86704 0.95642 0.90515 1.21472 1.01696 1.06010 0.92803 1.21081 0.92325 0.96093 1.00082 1.20261 0.97060 1.02803 0.95625 1.25196 0.85053 1.01474 1.07189 1.86576 1.39792 1.24119 1.85431 0.94116 0.84167 0.81065 0.73213 1.20941 0.96760 0.97050 0.93062 1.20633 0.92835 1.03194 1.01496 1.83959 1.38759 1.41509 1.41684 1.21782 1.01454 0.92425 1.00266 1.21521 1.02004 0.98879 0.91814 0.75198 0.89433 0.91319 0.92270 0.93007 0.75234 0.90571 0.89127 0.90964 0.79756 0.88059 0.84947 0.82309 0.83405 0.85987 0.76553 1.23631 1.20583 0.84750 0.85116 0.90098 0.91468 0.89104 0.90217 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.23 -0.42 19.25 74.32 1.43 1.02 16 2 C -0.19 -0.43 10.06 31.12 0.31 -0.12 16 3 C 0.02 -0.02 3.07 -12.60 -0.04 -0.06 16 4 H 0.11 -0.41 8.14 -2.38 -0.02 -0.43 16 5 C -0.11 0.06 5.43 30.59 0.17 0.23 16 6 C -0.13 -0.33 5.27 30.59 0.16 -0.17 16 7 C 0.15 0.19 2.45 44.99 0.11 0.30 16 8 H 0.09 0.29 7.58 -2.38 -0.02 0.27 16 9 N -0.71 -1.98 5.07 -446.52 -2.27 -4.24 16 10 C 0.60 4.78 7.75 86.44 0.67 5.45 16 11 O -0.54 -7.00 14.40 -4.34 -0.06 -7.06 16 12 C -0.10 -0.65 7.13 24.08 0.17 -0.48 16 13 C -0.09 -0.49 6.20 -19.74 -0.12 -0.61 16 14 C -0.09 -0.32 9.81 71.24 0.70 0.38 16 15 C -0.19 -0.16 10.73 22.07 0.24 0.07 16 16 C 0.01 0.01 6.94 24.97 0.17 0.18 16 17 C 0.14 -0.61 5.27 71.24 0.38 -0.24 16 18 O -0.33 -0.47 10.12 -92.46 -0.94 -1.41 16 19 C 0.13 0.06 6.69 22.51 0.15 0.21 16 20 C -0.20 0.75 9.04 22.36 0.20 0.95 16 21 C -0.08 0.28 8.66 22.25 0.19 0.48 16 22 C -0.16 0.19 5.35 -19.85 -0.11 0.08 16 23 C -0.08 0.13 2.80 71.24 0.20 0.33 16 24 O -0.55 -1.14 12.83 -148.98 -1.91 -3.05 16 25 Si 0.77 -2.61 29.88 68.60 2.05 -0.56 16 26 C -0.06 -0.04 9.68 22.26 0.22 0.18 16 27 C -0.16 -0.28 9.99 22.37 0.22 -0.06 16 28 O -0.16 -0.72 10.40 -4.95 -0.05 -0.78 16 29 C -0.12 0.28 5.17 30.59 0.16 0.44 16 30 C -0.10 0.40 5.43 30.60 0.17 0.56 16 31 H 0.23 -0.79 7.80 -4.42 -0.03 -0.83 16 32 H 0.09 -0.21 8.14 -2.38 -0.02 -0.23 16 33 H 0.07 0.01 8.14 -2.38 -0.02 -0.01 16 34 H 0.06 0.25 7.23 -2.39 -0.02 0.23 16 35 H 0.05 0.34 8.14 -2.39 -0.02 0.32 16 36 H 0.41 -0.14 8.36 -92.71 -0.77 -0.91 16 37 H 0.08 0.25 8.14 -2.38 -0.02 0.23 16 38 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 39 H 0.07 0.50 6.46 -2.39 -0.02 0.49 16 40 H 0.19 -0.86 8.06 -2.91 -0.02 -0.89 16 41 H 0.10 -0.78 7.65 -2.39 -0.02 -0.80 16 42 H 0.13 -1.41 7.67 -2.39 -0.02 -1.43 16 43 H 0.16 -1.54 6.30 -2.91 -0.02 -1.56 16 44 H 0.15 -1.13 4.83 -2.91 -0.01 -1.14 16 45 H 0.12 -0.35 7.96 -2.39 -0.02 -0.37 16 46 H 0.39 -1.35 8.70 -74.05 -0.64 -1.99 16 47 H -0.31 -1.57 7.11 99.48 0.71 -0.86 16 48 H -0.28 0.11 7.00 99.48 0.70 0.81 16 49 H 0.13 -0.05 8.06 -2.91 -0.02 -0.07 16 50 H 0.13 0.17 8.06 -2.91 -0.02 0.15 16 51 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 52 H 0.07 -0.07 7.23 -2.39 -0.02 -0.09 16 53 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 54 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 Total: 0.00 -20.57 444.19 2.12 -18.45 By element: Atomic # 1 Polarization: -10.02 SS G_CDS: -0.45 Total: -10.47 kcal Atomic # 6 Polarization: 3.37 SS G_CDS: 5.75 Total: 9.12 kcal Atomic # 7 Polarization: -1.98 SS G_CDS: -2.27 Total: -4.24 kcal Atomic # 8 Polarization: -9.34 SS G_CDS: -2.96 Total: -12.30 kcal Atomic # 14 Polarization: -2.61 SS G_CDS: 2.05 Total: -0.56 kcal Total: -20.57 2.12 -18.45 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17761044_4549632.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.845 kcal (2) G-P(sol) polarization free energy of solvation -20.572 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.727 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.120 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.451 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.606 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds